RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 BAG4O95429 457 aaKnown RBP16.04■□□□□ 0.16
PCDHB9-201ENST00000316105 CCDC85AQ96PX6 553 aaPredicted RBP16.04■□□□□ 0.16
PCDHB9-201ENST00000316105 FMNL2Q96PY5 1086 aa16.04■□□□□ 0.16
PCDHB9-201ENST00000316105 ORAI2Q96SN7 254 aa16.04■□□□□ 0.16
PCDHB9-201ENST00000316105 KIAA0232Q92628 1395 aa16.04■□□□□ 0.16
PCDHB9-201ENST00000316105 CPLX2Q6PUV4 134 aaKnown RBP16.03■□□□□ 0.16
PCDHB9-201ENST00000316105 FAM43AQ8N2R8 423 aa16.03■□□□□ 0.16
PCDHB9-201ENST00000316105 JARID2Q92833 1246 aaPredicted RBP16.03■□□□□ 0.16
PCDHB9-201ENST00000316105 A0A087WZG4 1122 aa16.02■□□□□ 0.16
PCDHB9-201ENST00000316105 LGR6Q9HBX8 967 aa16.02■□□□□ 0.16
PCDHB9-201ENST00000316105 ATP5J2-PTCD1G3V325 749 aa16.02■□□□□ 0.16
PCDHB9-201ENST00000316105 CCDC57Q2TAC2 916 aa16.02■□□□□ 0.16
PCDHB9-201ENST00000316105 NEXMIFQ5QGS0 1516 aa16.02■□□□□ 0.16
PCDHB9-201ENST00000316105 ZNF853P0CG23 659 aa16.02■□□□□ 0.15
PCDHB9-201ENST00000316105 LARP1BQ659C4 914 aaKnown RBP16.02■□□□□ 0.15
PCDHB9-201ENST00000316105 CCDC83Q8IWF9 413 aa16.02■□□□□ 0.15
PCDHB9-201ENST00000316105 TSPY26PQ9H489 355 aa16.02■□□□□ 0.15
PCDHB9-201ENST00000316105 CDK12Q9NYV4 1490 aaPredicted RBP16.02■□□□□ 0.15
PCDHB9-201ENST00000316105 USP6P35125 1406 aa16.01■□□□□ 0.15
PCDHB9-201ENST00000316105 GOLGA6L19H0YKK7 550 aa16.01■□□□□ 0.15
PCDHB9-201ENST00000316105 CCDC173Q0VFZ6 552 aa16.01■□□□□ 0.15
PCDHB9-201ENST00000316105 ANKRD1Q15327 319 aa16.01■□□□□ 0.15
PCDHB9-201ENST00000316105 UBE3BQ7Z3V4 1068 aa16.01■□□□□ 0.15
PCDHB9-201ENST00000316105 CABLES1Q8TDN4 633 aa16.01■□□□□ 0.15
PCDHB9-201ENST00000316105 USP19O94966 1318 aa16.01■□□□□ 0.15
PCDHB9-201ENST00000316105 BECN2A8MW95 431 aa16.01■□□□□ 0.15
PCDHB9-201ENST00000316105 CCDC158Q5M9N0 1113 aa16.01■□□□□ 0.15
PCDHB9-201ENST00000316105 NBPF6Q5VWK0 638 aa16.01■□□□□ 0.15
PCDHB9-201ENST00000316105 KSR2Q6VAB6 950 aa16.01■□□□□ 0.15
PCDHB9-201ENST00000316105 CADPS2Q86UW7 1296 aa16.01■□□□□ 0.15
PCDHB9-201ENST00000316105 NBPF4Q96M43 638 aa16.01■□□□□ 0.15
PCDHB9-201ENST00000316105 USP26Q9BXU7 913 aa16.01■□□□□ 0.15
PCDHB9-201ENST00000316105 NRXN1Q9ULB1 1477 aa16.01■□□□□ 0.15
PCDHB9-201ENST00000316105 CEP126Q9P2H0 1117 aa16.01■□□□□ 0.15
PCDHB9-201ENST00000316105 FKBP4Q02790 459 aaKnown RBP eCLIP16.01■□□□□ 0.15
PCDHB9-201ENST00000316105 TMX3Q96JJ7 454 aa16.01■□□□□ 0.15
PCDHB9-201ENST00000316105 ZSCAN31Q96LW9 406 aaPredicted RBP16.01■□□□□ 0.15
PCDHB9-201ENST00000316105 SOS1Q07889 1333 aaPredicted RBP16■□□□□ 0.15
PCDHB9-201ENST00000316105 BRPF1P55201 1214 aaPredicted RBP16■□□□□ 0.15
PCDHB9-201ENST00000316105 CWF19L2Q2TBE0 894 aaKnown RBP16■□□□□ 0.15
PCDHB9-201ENST00000316105 TTC39AQ5SRH9 613 aa16■□□□□ 0.15
PCDHB9-201ENST00000316105 VWDEQ8N2E2 1590 aa16■□□□□ 0.15
PCDHB9-201ENST00000316105 XAGE3Q8WTP9 111 aa16■□□□□ 0.15
PCDHB9-201ENST00000316105 CNNM1Q9NRU3 951 aa16■□□□□ 0.15
PCDHB9-201ENST00000316105 PA2G4Q9UQ80 394 aaKnown RBP16■□□□□ 0.15
PCDHB9-201ENST00000316105 PIP4K2AP48426 406 aaPredicted RBP16■□□□□ 0.15
PCDHB9-201ENST00000316105 SYNE3Q6ZMZ3 975 aa16■□□□□ 0.15
PCDHB9-201ENST00000316105 COPS6Q7L5N1 327 aa16■□□□□ 0.15
PCDHB9-201ENST00000316105 DEPDC5O75140 1603 aa15.99■□□□□ 0.15
PCDHB9-201ENST00000316105 PNMA6EA0A0J9YXQ4 647 aa15.99■□□□□ 0.15
PCDHB9-201ENST00000316105 RNMTO43148 476 aaKnown RBP15.99■□□□□ 0.15
PCDHB9-201ENST00000316105 ALDH1L1O75891 902 aa15.99■□□□□ 0.15
PCDHB9-201ENST00000316105 SYCE3A1L190 88 aa15.99■□□□□ 0.15
PCDHB9-201ENST00000316105 GRM8O00222 908 aa15.99■□□□□ 0.15
PCDHB9-201ENST00000316105 SNRPA1P09661 255 aaKnown RBP15.99■□□□□ 0.15
PCDHB9-201ENST00000316105 TPM4P67936 248 aa15.99■□□□□ 0.15
PCDHB9-201ENST00000316105 IL17REQ8NFR9 667 aa15.99■□□□□ 0.15
PCDHB9-201ENST00000316105 EVI5LQ96CN4 794 aa15.99■□□□□ 0.15
PCDHB9-201ENST00000316105 C19orf44Q9H6X5 657 aa15.99■□□□□ 0.15
PCDHB9-201ENST00000316105 NLRP1Q9C000 1473 aa15.99■□□□□ 0.15
PCDHB9-201ENST00000316105 ANKRD13DQ6ZTN6 518 aa15.99■□□□□ 0.15
PCDHB9-201ENST00000316105 NFXL1Q6ZNB6 911 aa15.99■□□□□ 0.15
PCDHB9-201ENST00000316105 PTPRMP28827 1452 aa15.99■□□□□ 0.15
PCDHB9-201ENST00000316105 ZBTB3Q9H5J0 574 aa15.98■□□□□ 0.15
PCDHB9-201ENST00000316105 LIMCH1Q9UPQ0 1083 aa15.98■□□□□ 0.15
PCDHB9-201ENST00000316105 RTL1A6NKG5 1358 aa15.98■□□□□ 0.15
PCDHB9-201ENST00000316105 NFATC2IPQ8NCF5 419 aa15.98■□□□□ 0.15
PCDHB9-201ENST00000316105 ADGRB1O14514 1584 aa15.98■□□□□ 0.15
PCDHB9-201ENST00000316105 GSPT1P15170 499 aaKnown RBP15.98■□□□□ 0.15
PCDHB9-201ENST00000316105 BABAM1Q9NWV8 329 aa15.98■□□□□ 0.15
PCDHB9-201ENST00000316105 SASS6Q6UVJ0 657 aa15.97■□□□□ 0.15
PCDHB9-201ENST00000316105 CCDC73Q6ZRK6 1079 aa15.97■□□□□ 0.15
PCDHB9-201ENST00000316105 LINS1Q8NG48 757 aa15.97■□□□□ 0.15
PCDHB9-201ENST00000316105 KIF24Q5T7B8 1368 aa15.97■□□□□ 0.15
PCDHB9-201ENST00000316105 RAB3GAP1Q15042 981 aa15.97■□□□□ 0.15
PCDHB9-201ENST00000316105 FERMT3Q86UX7 667 aa15.97■□□□□ 0.15
PCDHB9-201ENST00000316105 PNPLA6Q8IY17 1366 aa15.97■□□□□ 0.15
PCDHB9-201ENST00000316105 MROH2AA6NES4 1674 aa15.97■□□□□ 0.15
PCDHB9-201ENST00000316105 VPS37DQ86XT2 251 aa15.97■□□□□ 0.15
PCDHB9-201ENST00000316105 GDPD2Q9HCC8 539 aa15.97■□□□□ 0.15
PCDHB9-201ENST00000316105 PODXL2Q9NZ53 605 aa15.97■□□□□ 0.15
PCDHB9-201ENST00000316105 CHMLP26374 656 aa15.97■□□□□ 0.15
PCDHB9-201ENST00000316105 KRT85P78386 507 aa15.97■□□□□ 0.15
PCDHB9-201ENST00000316105 CEBPZQ03701 1054 aaKnown RBP15.97■□□□□ 0.15
PCDHB9-201ENST00000316105 TRIM29Q14134 588 aa15.97■□□□□ 0.15
PCDHB9-201ENST00000316105 NPHP3Q7Z494 1330 aa15.96■□□□□ 0.15
PCDHB9-201ENST00000316105 KRT32Q14532 448 aa15.96■□□□□ 0.15
PCDHB9-201ENST00000316105 TMOD3Q9NYL9 352 aa15.96■□□□□ 0.15
PCDHB9-201ENST00000316105 TBC1D2BQ9UPU7 963 aa15.96■□□□□ 0.15
PCDHB9-201ENST00000316105 ZGPATQ8N5A5 531 aaKnown RBP15.96■□□□□ 0.14
PCDHB9-201ENST00000316105 A0A0U1RQG5 324 aaPredicted RBP15.95■□□□□ 0.14
PCDHB9-201ENST00000316105 FBXW7Q969H0 707 aa15.95■□□□□ 0.14
PCDHB9-201ENST00000316105 PIK3C2BO00750 1634 aa15.95■□□□□ 0.14
PCDHB9-201ENST00000316105 ESPNB1AK53 854 aa15.95■□□□□ 0.14
PCDHB9-201ENST00000316105 LETM1O95202 739 aaPredicted RBP15.95■□□□□ 0.14
PCDHB9-201ENST00000316105 ARHGEF40Q8TER5 1519 aa15.95■□□□□ 0.14
PCDHB9-201ENST00000316105 ANAPC15P60006 121 aa15.95■□□□□ 0.14
PCDHB9-201ENST00000316105 KLHL40Q2TBA0 621 aa15.95■□□□□ 0.14
PCDHB9-201ENST00000316105 IGSF1Q8N6C5 1336 aa15.95■□□□□ 0.14
PCDHB9-201ENST00000316105 NBPF7P0C2Y1 421 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms