RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 CCDC73Q6ZRK6 1079 aa12.88□□□□□ -0.35
HNF4A-201ENST00000316099 ANKARQ7Z5J8 1434 aa12.88□□□□□ -0.35
HNF4A-201ENST00000316099 AK7Q96M32 723 aa12.88□□□□□ -0.35
HNF4A-201ENST00000316099 UBR1Q8IWV7 1749 aa12.88□□□□□ -0.35
HNF4A-201ENST00000316099 FLIIQ13045 1269 aa12.88□□□□□ -0.35
HNF4A-201ENST00000316099 TRIM29Q14134 588 aa12.88□□□□□ -0.35
HNF4A-201ENST00000316099 CWC22Q9HCG8 908 aaKnown RBP12.88□□□□□ -0.35
HNF4A-201ENST00000316099 PTCH1Q13635 1447 aa12.87□□□□□ -0.35
HNF4A-201ENST00000316099 CPS1P31327 1500 aa12.87□□□□□ -0.35
HNF4A-201ENST00000316099 AKAP4Q5JQC9 854 aa12.87□□□□□ -0.35
HNF4A-201ENST00000316099 CEP89Q96ST8 783 aa12.87□□□□□ -0.35
HNF4A-201ENST00000316099 CCP110O43303 1012 aa12.87□□□□□ -0.35
HNF4A-201ENST00000316099 HSP90B2PQ58FF3 399 aa12.87□□□□□ -0.35
HNF4A-201ENST00000316099 HSP90AB4PQ58FF6 505 aa12.87□□□□□ -0.35
HNF4A-201ENST00000316099 IFIT2P09913 472 aaKnown RBP12.87□□□□□ -0.35
HNF4A-201ENST00000316099 PHF23Q9BUL5 403 aaPredicted RBP12.87□□□□□ -0.35
HNF4A-201ENST00000316099 TMX4Q9H1E5 349 aaPredicted RBP12.87□□□□□ -0.35
HNF4A-201ENST00000316099 USP32Q8NFA0 1604 aa12.86□□□□□ -0.35
HNF4A-201ENST00000316099 SURF6O75683 361 aaKnown RBP12.86□□□□□ -0.35
HNF4A-201ENST00000316099 NBPF6Q5VWK0 638 aa12.86□□□□□ -0.35
HNF4A-201ENST00000316099 RPAP2Q8IXW5 612 aaPredicted RBP12.86□□□□□ -0.35
HNF4A-201ENST00000316099 NBPF4Q96M43 638 aa12.86□□□□□ -0.35
HNF4A-201ENST00000316099 C3P01024 1663 aa12.86□□□□□ -0.35
HNF4A-201ENST00000316099 TECPR2O15040 1411 aa12.86□□□□□ -0.35
HNF4A-201ENST00000316099 SYNE3Q6ZMZ3 975 aa12.86□□□□□ -0.35
HNF4A-201ENST00000316099 CIZ1Q9ULV3 898 aaPredicted RBP12.86□□□□□ -0.35
HNF4A-201ENST00000316099 TMEM94Q12767 1356 aa12.86□□□□□ -0.35
HNF4A-201ENST00000316099 FAM177BA6PVY3 158 aa12.86□□□□□ -0.35
HNF4A-201ENST00000316099 AKAP17AQ02040 695 aaKnown RBP12.86□□□□□ -0.35
HNF4A-201ENST00000316099 TOMM22Q9NS69 142 aa12.86□□□□□ -0.35
HNF4A-201ENST00000316099 DIP2AQ14689 1571 aa12.86□□□□□ -0.35
HNF4A-201ENST00000316099 FBXW7Q969H0 707 aa12.86□□□□□ -0.35
HNF4A-201ENST00000316099 RNF214Q8ND24 703 aa12.85□□□□□ -0.35
HNF4A-201ENST00000316099 CD163L1Q9NR16 1453 aa12.85□□□□□ -0.35
HNF4A-201ENST00000316099 PNPLA6Q8IY17 1366 aa12.85□□□□□ -0.35
HNF4A-201ENST00000316099 ERC2O15083 957 aa12.85□□□□□ -0.35
HNF4A-201ENST00000316099 CHL1O00533 1208 aa12.85□□□□□ -0.35
HNF4A-201ENST00000316099 RBM10P98175 930 aaKnown RBP12.85□□□□□ -0.35
HNF4A-201ENST00000316099 KDM2BQ8NHM5 1336 aa12.85□□□□□ -0.35
HNF4A-201ENST00000316099 G3BP1Q13283 466 aaKnown RBP eCLIP12.85□□□□□ -0.356e-9■□□□□ 9.6
HNF4A-201ENST00000316099 RBM42Q9BTD8 480 aaKnown RBP12.85□□□□□ -0.35
HNF4A-201ENST00000316099 DHX8Q14562 1220 aaKnown RBP12.85□□□□□ -0.35
HNF4A-201ENST00000316099 IFNL2Q8IZJ0 200 aa12.85□□□□□ -0.35
HNF4A-201ENST00000316099 ERCC4Q92889 916 aaPredicted RBP12.85□□□□□ -0.35
HNF4A-201ENST00000316099 HDAC1Q13547 482 aaPredicted RBP12.84□□□□□ -0.35
HNF4A-201ENST00000316099 LRRC7Q96NW7 1537 aa12.84□□□□□ -0.35
HNF4A-201ENST00000316099 PRPF40AO75400 957 aaKnown RBP12.84□□□□□ -0.35
HNF4A-201ENST00000316099 ESPNB1AK53 854 aa12.84□□□□□ -0.35
HNF4A-201ENST00000316099 RUFY1Q96T51 708 aa12.84□□□□□ -0.35
HNF4A-201ENST00000316099 SMARCA5O60264 1052 aaPredicted RBP12.84□□□□□ -0.35
HNF4A-201ENST00000316099 CCDC47Q96A33 483 aaKnown RBP12.84□□□□□ -0.35
HNF4A-201ENST00000316099 CDR1P51861 262 aa12.83□□□□□ -0.36
HNF4A-201ENST00000316099 MAP2P11137 1827 aaKnown RBP12.83□□□□□ -0.36
HNF4A-201ENST00000316099 UQCRHLA0A096LP55 91 aa12.83□□□□□ -0.36
HNF4A-201ENST00000316099 ANXA1P04083 346 aa12.83□□□□□ -0.36
HNF4A-201ENST00000316099 UQCRHP07919 91 aa12.83□□□□□ -0.36
HNF4A-201ENST00000316099 LRRCC1Q9C099 1032 aa12.83□□□□□ -0.36
HNF4A-201ENST00000316099 CPLX1O14810 134 aa12.83□□□□□ -0.36
HNF4A-201ENST00000316099 ZBTB40Q9NUA8 1239 aa12.83□□□□□ -0.36
HNF4A-201ENST00000316099 SETD1BQ9UPS6 1966 aaKnown RBP12.83□□□□□ -0.36
HNF4A-201ENST00000316099 K7ELQ4 463 aaPredicted RBP12.83□□□□□ -0.36
HNF4A-201ENST00000316099 CHPF2Q9P2E5 772 aa12.83□□□□□ -0.36
HNF4A-201ENST00000316099 MCM4P33991 863 aa12.82□□□□□ -0.36
HNF4A-201ENST00000316099 EXOC6BQ9Y2D4 811 aa12.82□□□□□ -0.36
HNF4A-201ENST00000316099 ADGRL3Q9HAR2 1447 aa12.82□□□□□ -0.36
HNF4A-201ENST00000316099 PSMA5P28066 241 aa12.82□□□□□ -0.36
HNF4A-201ENST00000316099 MEIS3Q99687 375 aa12.82□□□□□ -0.36
HNF4A-201ENST00000316099 LGR6Q9HBX8 967 aa12.82□□□□□ -0.36
HNF4A-201ENST00000316099 TRIM5Q9C035 493 aa12.82□□□□□ -0.36
HNF4A-201ENST00000316099 DBF4Q9UBU7 674 aaPredicted RBP12.82□□□□□ -0.36
HNF4A-201ENST00000316099 IGSF1Q8N6C5 1336 aa12.82□□□□□ -0.36
HNF4A-201ENST00000316099 RNMTO43148 476 aaKnown RBP12.81□□□□□ -0.36
HNF4A-201ENST00000316099 SRGAP3O43295 1099 aa12.81□□□□□ -0.36
HNF4A-201ENST00000316099 LRRFIP2Q9Y608 721 aaKnown RBP12.81□□□□□ -0.36
HNF4A-201ENST00000316099 SLC39A6Q13433 755 aa12.81□□□□□ -0.36
HNF4A-201ENST00000316099 DNAAF4Q8WXU2 420 aa12.81□□□□□ -0.36
HNF4A-201ENST00000316099 OLFM4Q6UX06 510 aa12.81□□□□□ -0.36
HNF4A-201ENST00000316099 PTCD1O75127 700 aaKnown RBP12.81□□□□□ -0.36
HNF4A-201ENST00000316099 TAF3Q5VWG9 929 aa12.81□□□□□ -0.36
HNF4A-201ENST00000316099 ADAMTS2O95450 1211 aa12.8□□□□□ -0.36
HNF4A-201ENST00000316099 G2E3Q7L622 706 aa12.8□□□□□ -0.36
HNF4A-201ENST00000316099 SLIT1O75093 1534 aa12.8□□□□□ -0.36
HNF4A-201ENST00000316099 PCMTD1Q96MG8 357 aaPredicted RBP12.8□□□□□ -0.36
HNF4A-201ENST00000316099 IQSEC2Q5JU85 1478 aa12.8□□□□□ -0.36
HNF4A-201ENST00000316099 ZBTB7BO15156 539 aaPredicted RBP12.8□□□□□ -0.36
HNF4A-201ENST00000316099 MARCH6O60337 910 aa12.8□□□□□ -0.36
HNF4A-201ENST00000316099 NUCB1Q02818 461 aa12.8□□□□□ -0.36
HNF4A-201ENST00000316099 MAP3K2Q9Y2U5 619 aa12.8□□□□□ -0.36
HNF4A-201ENST00000316099 PI4KAP2A4QPH2 592 aa12.79□□□□□ -0.36
HNF4A-201ENST00000316099 PI4KAP1Q8N8J0 262 aa12.79□□□□□ -0.36
HNF4A-201ENST00000316099 HYPKQ9NX55 129 aa12.79□□□□□ -0.36
HNF4A-201ENST00000316099 CNTROBQ8N137 903 aa12.79□□□□□ -0.36
HNF4A-201ENST00000316099 PDCP20941 246 aa12.79□□□□□ -0.36
HNF4A-201ENST00000316099 SLAIN2Q9P270 581 aa12.79□□□□□ -0.36
HNF4A-201ENST00000316099 RAD21O60216 631 aa12.79□□□□□ -0.36
HNF4A-201ENST00000316099 ZSCAN30Q86W11 494 aa12.79□□□□□ -0.36
HNF4A-201ENST00000316099 IL1RAPL2Q9NP60 686 aa12.79□□□□□ -0.36
HNF4A-201ENST00000316099 RTL1A6NKG5 1358 aa12.79□□□□□ -0.36
HNF4A-201ENST00000316099 IL17REQ8NFR9 667 aa12.78□□□□□ -0.36
HNF4A-201ENST00000316099 KIF6Q6ZMV9 814 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms