RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 RABEP1Q15276 862 aa15.93■□□□□ 0.14
RFFL-201ENST00000315249 FANCIQ9NVI1 1328 aa15.93■□□□□ 0.14
RFFL-201ENST00000315249 NLRP3Q96P20 1036 aa15.93■□□□□ 0.14
RFFL-201ENST00000315249 U3KPZ7 1027 aaPredicted RBP15.93■□□□□ 0.14
RFFL-201ENST00000315249 JMYQ8N9B5 988 aa15.93■□□□□ 0.14
RFFL-201ENST00000315249 NFATC2IPQ8NCF5 419 aa15.93■□□□□ 0.14
RFFL-201ENST00000315249 SNRKQ9NRH2 765 aa15.93■□□□□ 0.14
RFFL-201ENST00000315249 GLRX3O76003 335 aaKnown RBP15.92■□□□□ 0.14
RFFL-201ENST00000315249 DDX17Q92841 729 aaKnown RBP15.92■□□□□ 0.14
RFFL-201ENST00000315249 RBM26Q5T8P6 1007 aaKnown RBP15.92■□□□□ 0.14
RFFL-201ENST00000315249 LARP1BQ659C4 914 aaKnown RBP15.92■□□□□ 0.14
RFFL-201ENST00000315249 DISP3Q9P2K9 1392 aa15.92■□□□□ 0.14
RFFL-201ENST00000315249 CASTP20810 708 aaKnown RBP15.91■□□□□ 0.14
RFFL-201ENST00000315249 GCP02774 474 aa15.91■□□□□ 0.14
RFFL-201ENST00000315249 DDX11Q96FC9 970 aa15.91■□□□□ 0.14
RFFL-201ENST00000315249 ANKRD18AQ8IVF6 992 aa15.91■□□□□ 0.14
RFFL-201ENST00000315249 OGFOD1Q8N543 542 aa15.91■□□□□ 0.14
RFFL-201ENST00000315249 CHPF2Q9P2E5 772 aa15.91■□□□□ 0.14
RFFL-201ENST00000315249 TNIP1Q15025 636 aa15.91■□□□□ 0.14
RFFL-201ENST00000315249 TANGO6Q9C0B7 1094 aa15.91■□□□□ 0.14
RFFL-201ENST00000315249 IQSEC3Q9UPP2 1182 aaPredicted RBP15.91■□□□□ 0.14
RFFL-201ENST00000315249 KRT32Q14532 448 aa15.9■□□□□ 0.14
RFFL-201ENST00000315249 FAM98CQ17RN3 349 aaKnown RBP15.9■□□□□ 0.14
RFFL-201ENST00000315249 IQCA1Q86XH1 822 aa15.9■□□□□ 0.14
RFFL-201ENST00000315249 BAG3O95817 575 aa15.9■□□□□ 0.14
RFFL-201ENST00000315249 TRMT1LQ7Z2T5 733 aaKnown RBP15.9■□□□□ 0.14
RFFL-201ENST00000315249 ABCC11Q96J66 1382 aa15.9■□□□□ 0.14
RFFL-201ENST00000315249 BMP2KQ9NSY1 1161 aaPredicted RBP15.9■□□□□ 0.14
RFFL-201ENST00000315249 SMC2O95347 1197 aa15.9■□□□□ 0.14
RFFL-201ENST00000315249 MX1P20591 662 aa15.9■□□□□ 0.14
RFFL-201ENST00000315249 FILIP1LQ4L180 1135 aa15.9■□□□□ 0.14
RFFL-201ENST00000315249 XAGE3Q8WTP9 111 aa15.9■□□□□ 0.14
RFFL-201ENST00000315249 ZNF213O14771 459 aa15.89■□□□□ 0.13
RFFL-201ENST00000315249 COPS6Q7L5N1 327 aa15.89■□□□□ 0.13
RFFL-201ENST00000315249 ABCC2Q92887 1545 aa15.89■□□□□ 0.13
RFFL-201ENST00000315249 ALDH1L2Q3SY69 923 aa15.89■□□□□ 0.13
RFFL-201ENST00000315249 DZIP3Q86Y13 1208 aaKnown RBP15.89■□□□□ 0.13
RFFL-201ENST00000315249 MAP3K1Q13233 1512 aa15.89■□□□□ 0.13
RFFL-201ENST00000315249 GOLIM4O00461 696 aa15.89■□□□□ 0.13
RFFL-201ENST00000315249 STIM1Q13586 685 aa15.89■□□□□ 0.13
RFFL-201ENST00000315249 RNF214Q8ND24 703 aa15.88■□□□□ 0.13
RFFL-201ENST00000315249 VAT1LQ9HCJ6 419 aa15.88■□□□□ 0.13
RFFL-201ENST00000315249 CABP5Q9NP86 173 aa15.88■□□□□ 0.13
RFFL-201ENST00000315249 GNPATO15228 680 aa15.88■□□□□ 0.13
RFFL-201ENST00000315249 HLA-DOAP06340 250 aa15.88■□□□□ 0.13
RFFL-201ENST00000315249 MBIPQ9NS73 344 aa15.88■□□□□ 0.13
RFFL-201ENST00000315249 ORAI2Q96SN7 254 aa15.88■□□□□ 0.13
RFFL-201ENST00000315249 NSD2O96028 1365 aa15.88■□□□□ 0.13
RFFL-201ENST00000315249 CUL5Q93034 780 aa15.87■□□□□ 0.13
RFFL-201ENST00000315249 PRPF40AO75400 957 aaKnown RBP15.87■□□□□ 0.13
RFFL-201ENST00000315249 LDHCP07864 332 aa15.87■□□□□ 0.13
RFFL-201ENST00000315249 RARSP54136 660 aaKnown RBP15.87■□□□□ 0.13
RFFL-201ENST00000315249 AEBP1Q8IUX7 1158 aa15.87■□□□□ 0.13
RFFL-201ENST00000315249 USP21Q9UK80 565 aa15.87■□□□□ 0.13
RFFL-201ENST00000315249 HDAC9Q9UKV0 1011 aa15.87■□□□□ 0.13
RFFL-201ENST00000315249 TMEM87AQ8NBN3 555 aa15.87■□□□□ 0.13
RFFL-201ENST00000315249 FAM13BQ9NYF5 915 aa15.87■□□□□ 0.13
RFFL-201ENST00000315249 PTPRCP08575 1304 aa15.87■□□□□ 0.13
RFFL-201ENST00000315249 AKAP4Q5JQC9 854 aa15.87■□□□□ 0.13
RFFL-201ENST00000315249 SPTY2D1Q68D10 685 aaPredicted RBP15.87■□□□□ 0.13
RFFL-201ENST00000315249 CTCFLQ8NI51 663 aaPredicted RBP15.87■□□□□ 0.13
RFFL-201ENST00000315249 SPDYE4A6NLX3 237 aa15.87■□□□□ 0.13
RFFL-201ENST00000315249 RIMBP2O15034 1052 aa15.86■□□□□ 0.13
RFFL-201ENST00000315249 NYXQ9GZU5 481 aa15.86■□□□□ 0.13
RFFL-201ENST00000315249 ABCC1P33527 1531 aa15.86■□□□□ 0.13
RFFL-201ENST00000315249 WASF1Q92558 559 aa15.86■□□□□ 0.13
RFFL-201ENST00000315249 STK32BQ9NY57 414 aa15.86■□□□□ 0.13
RFFL-201ENST00000315249 ANKRD36BQ8N2N9 1353 aa15.86■□□□□ 0.13
RFFL-201ENST00000315249 TPTE2Q6XPS3 522 aa15.86■□□□□ 0.13
RFFL-201ENST00000315249 JDP2Q8WYK2 163 aa15.86■□□□□ 0.13
RFFL-201ENST00000315249 UGGT2Q9NYU1 1516 aa15.86■□□□□ 0.13
RFFL-201ENST00000315249 UTP14AQ9BVJ6 771 aaKnown RBP15.86■□□□□ 0.13
RFFL-201ENST00000315249 VEZTQ9HBM0 779 aa15.86■□□□□ 0.13
RFFL-201ENST00000315249 RPRD2Q5VT52 1461 aaKnown RBP15.85■□□□□ 0.13
RFFL-201ENST00000315249 DHX8Q14562 1220 aaKnown RBP15.85■□□□□ 0.13
RFFL-201ENST00000315249 PRPF40BQ6NWY9 871 aaKnown RBP15.85■□□□□ 0.13
RFFL-201ENST00000315249 CAVIN1Q6NZI2 390 aaKnown RBP15.85■□□□□ 0.13
RFFL-201ENST00000315249 PIK3R4Q99570 1358 aa15.85■□□□□ 0.13
RFFL-201ENST00000315249 EIF4A2Q14240 407 aaKnown RBP15.85■□□□□ 0.13
RFFL-201ENST00000315249 TRAPPC3LQ5T215 181 aa15.85■□□□□ 0.13
RFFL-201ENST00000315249 IFIT3O14879 490 aaKnown RBP15.85■□□□□ 0.13
RFFL-201ENST00000315249 ZC3H12CQ9C0D7 883 aaKnown RBP15.85■□□□□ 0.13
RFFL-201ENST00000315249 ATP10AO60312 1499 aa15.85■□□□□ 0.13
RFFL-201ENST00000315249 NSFL1CQ9UNZ2 370 aaKnown RBP15.85■□□□□ 0.13
RFFL-201ENST00000315249 TSPY2A6NKD2 308 aa15.84■□□□□ 0.13
RFFL-201ENST00000315249 PICALMQ13492 652 aa15.84■□□□□ 0.13
RFFL-201ENST00000315249 TRIM5Q9C035 493 aa15.84■□□□□ 0.13
RFFL-201ENST00000315249 SLC12A7Q9Y666 1083 aa15.84■□□□□ 0.13
RFFL-201ENST00000315249 TTF1Q15361 905 aaPredicted RBP15.84■□□□□ 0.13
RFFL-201ENST00000315249 GJA3Q9Y6H8 435 aa15.84■□□□□ 0.13
RFFL-201ENST00000315249 NPATQ14207 1427 aa15.84■□□□□ 0.13
RFFL-201ENST00000315249 CCDC144CPQ8IYA2 1237 aa15.83■□□□□ 0.13
RFFL-201ENST00000315249 CCDC173Q0VFZ6 552 aa15.83■□□□□ 0.13
RFFL-201ENST00000315249 PPP4R3AQ6IN85 833 aa15.83■□□□□ 0.13
RFFL-201ENST00000315249 SLAIN2Q9P270 581 aa15.83■□□□□ 0.12
RFFL-201ENST00000315249 CCNL1Q9UK58 526 aaPredicted RBP15.83■□□□□ 0.12
RFFL-201ENST00000315249 WDR62O43379 1518 aa15.83■□□□□ 0.12
RFFL-201ENST00000315249 SETD1BQ9UPS6 1966 aaKnown RBP15.83■□□□□ 0.12
RFFL-201ENST00000315249 SEPT11Q9NVA2 429 aaKnown RBP15.83■□□□□ 0.12
RFFL-201ENST00000315249 CAGE1Q8TC20 777 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms