RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 BMP2KQ9NSY1 1161 aaPredicted RBP10.29□□□□□ -0.76
COL6A5-202ENST00000312481 HECW2Q9P2P5 1572 aa10.29□□□□□ -0.76
COL6A5-202ENST00000312481 PLIN1O60240 522 aa10.29□□□□□ -0.76
COL6A5-202ENST00000312481 FRAT2O75474 233 aaPredicted RBP10.29□□□□□ -0.76
COL6A5-202ENST00000312481 LMOD2Q6P5Q4 547 aa10.29□□□□□ -0.76
COL6A5-202ENST00000312481 KIF6Q6ZMV9 814 aa10.29□□□□□ -0.76
COL6A5-202ENST00000312481 NFXL1Q6ZNB6 911 aa10.29□□□□□ -0.76
COL6A5-202ENST00000312481 FSD1Q9BTV5 496 aa10.29□□□□□ -0.76
COL6A5-202ENST00000312481 NOB1Q9ULX3 412 aaKnown RBP10.29□□□□□ -0.76
COL6A5-202ENST00000312481 TMTC2Q8N394 836 aa10.29□□□□□ -0.76
COL6A5-202ENST00000312481 EVI5LQ96CN4 794 aa10.29□□□□□ -0.76
COL6A5-202ENST00000312481 SPG7Q9UQ90 795 aa10.29□□□□□ -0.76
COL6A5-202ENST00000312481 OFD1O75665 1012 aa10.28□□□□□ -0.76
COL6A5-202ENST00000312481 SPATA31E1Q6ZUB1 1445 aa10.28□□□□□ -0.76
COL6A5-202ENST00000312481 NUCB1Q02818 461 aa10.28□□□□□ -0.76
COL6A5-202ENST00000312481 KIF5CO60282 957 aa10.28□□□□□ -0.76
COL6A5-202ENST00000312481 CETN2P41208 172 aa10.28□□□□□ -0.76
COL6A5-202ENST00000312481 LARP1Q6PKG0 1096 aaKnown RBP10.28□□□□□ -0.76
COL6A5-202ENST00000312481 ANKRD24Q8TF21 1146 aa10.28□□□□□ -0.76
COL6A5-202ENST00000312481 CCDC12Q8WUD4 166 aaPredicted RBP10.28□□□□□ -0.76
COL6A5-202ENST00000312481 UPF3BQ9BZI7 483 aaKnown RBP10.28□□□□□ -0.76
COL6A5-202ENST00000312481 NBPF1Q3BBV0 1214 aa10.28□□□□□ -0.76
COL6A5-202ENST00000312481 TEX13AQ9BXU3 409 aaPredicted RBP10.28□□□□□ -0.76
COL6A5-202ENST00000312481 CCDC172P0C7W6 258 aa10.28□□□□□ -0.76
COL6A5-202ENST00000312481 PRKAR2BP31323 418 aa10.28□□□□□ -0.76
COL6A5-202ENST00000312481 CCAR1Q8IX12 1150 aaKnown RBP10.28□□□□□ -0.76
COL6A5-202ENST00000312481 ATP10BO94823 1461 aa10.28□□□□□ -0.76
COL6A5-202ENST00000312481 NF2P35240 595 aa10.28□□□□□ -0.76
COL6A5-202ENST00000312481 CROCCP2Q86T23 111 aa10.28□□□□□ -0.76
COL6A5-202ENST00000312481 LRRIQ1Q96JM4 1722 aa10.28□□□□□ -0.76
COL6A5-202ENST00000312481 CLSTN1O94985 981 aa10.28□□□□□ -0.76
COL6A5-202ENST00000312481 MX1P20591 662 aa10.28□□□□□ -0.76
COL6A5-202ENST00000312481 CKAP4Q07065 602 aaKnown RBP10.28□□□□□ -0.76
COL6A5-202ENST00000312481 SLC26A8Q96RN1 970 aa10.28□□□□□ -0.76
COL6A5-202ENST00000312481 CD109Q6YHK3 1445 aa10.28□□□□□ -0.76
COL6A5-202ENST00000312481 VPS37DQ86XT2 251 aa10.27□□□□□ -0.76
COL6A5-202ENST00000312481 TAOK3Q9H2K8 898 aa10.27□□□□□ -0.76
COL6A5-202ENST00000312481 UQCRHLA0A096LP55 91 aa10.27□□□□□ -0.76
COL6A5-202ENST00000312481 UQCRHP07919 91 aa10.27□□□□□ -0.76
COL6A5-202ENST00000312481 BMS1Q14692 1282 aaKnown RBP10.27□□□□□ -0.76
COL6A5-202ENST00000312481 HSP90AB2PQ58FF8 381 aa10.27□□□□□ -0.76
COL6A5-202ENST00000312481 KCNG4Q8TDN1 519 aa10.27□□□□□ -0.76
COL6A5-202ENST00000312481 UBE2Q2Q8WVN8 375 aa10.27□□□□□ -0.76
COL6A5-202ENST00000312481 MYH6P13533 1939 aa10.27□□□□□ -0.76
COL6A5-202ENST00000312481 NDC80O14777 642 aa10.27□□□□□ -0.77
COL6A5-202ENST00000312481 NBPF8Q3BBV2 869 aa10.27□□□□□ -0.77
COL6A5-202ENST00000312481 APBB1O00213 710 aa10.27□□□□□ -0.77
COL6A5-202ENST00000312481 PLVAPQ9BX97 442 aa10.27□□□□□ -0.77
COL6A5-202ENST00000312481 USP32Q8NFA0 1604 aa10.27□□□□□ -0.77
COL6A5-202ENST00000312481 PRPHP41219 470 aa10.27□□□□□ -0.77
COL6A5-202ENST00000312481 E9PCH4 1651 aa10.27□□□□□ -0.77
COL6A5-202ENST00000312481 ARHGEF10O15013 1369 aa10.27□□□□□ -0.77
COL6A5-202ENST00000312481 STMN4Q9H169 189 aaPredicted RBP10.27□□□□□ -0.77
COL6A5-202ENST00000312481 NPHP3Q7Z494 1330 aa10.27□□□□□ -0.77
COL6A5-202ENST00000312481 SHTN1A0MZ66 631 aa10.26□□□□□ -0.77
COL6A5-202ENST00000312481 HDGFL1Q5TGJ6 251 aa10.26□□□□□ -0.77
COL6A5-202ENST00000312481 ANKRD26Q9UPS8 1709 aa10.26□□□□□ -0.77
COL6A5-202ENST00000312481 MAGI2Q86UL8 1455 aa10.26□□□□□ -0.77
COL6A5-202ENST00000312481 GNAT3A8MTJ3 354 aa10.26□□□□□ -0.77
COL6A5-202ENST00000312481 PPP2R5BQ15173 497 aa10.26□□□□□ -0.77
COL6A5-202ENST00000312481 LRSAM1Q6UWE0 723 aa10.26□□□□□ -0.77
COL6A5-202ENST00000312481 BBXQ8WY36 941 aaPredicted RBP10.26□□□□□ -0.77
COL6A5-202ENST00000312481 MINK1Q8N4C8 1332 aaPredicted RBP10.26□□□□□ -0.77
COL6A5-202ENST00000312481 CRACR2AQ9BSW2 395 aa10.26□□□□□ -0.77
COL6A5-202ENST00000312481 C14orf93Q9H972 538 aaKnown RBP10.26□□□□□ -0.77
COL6A5-202ENST00000312481 IQGAP1P46940 1657 aa10.26□□□□□ -0.77
COL6A5-202ENST00000312481 EZRP15311 586 aaKnown RBP10.26□□□□□ -0.77
COL6A5-202ENST00000312481 RMND1Q9NWS8 449 aa10.26□□□□□ -0.77
COL6A5-202ENST00000312481 ATP7BP35670 1465 aa10.26□□□□□ -0.77
COL6A5-202ENST00000312481 PRPF40AO75400 957 aaKnown RBP10.26□□□□□ -0.77
COL6A5-202ENST00000312481 RIC3Q7Z5B4 369 aa10.26□□□□□ -0.77
COL6A5-202ENST00000312481 TRIM34Q9BYJ4 488 aa10.26□□□□□ -0.77
COL6A5-202ENST00000312481 SURF6O75683 361 aaKnown RBP10.26□□□□□ -0.77
COL6A5-202ENST00000312481 CASTP20810 708 aaKnown RBP10.26□□□□□ -0.77
COL6A5-202ENST00000312481 R3HCC1Q9Y3T6 440 aaKnown RBP10.26□□□□□ -0.77
COL6A5-202ENST00000312481 ELP1O95163 1332 aa10.26□□□□□ -0.77
COL6A5-202ENST00000312481 PIP4K2BP78356 416 aa10.26□□□□□ -0.77
COL6A5-202ENST00000312481 ZNF644Q9H582 1327 aaPredicted RBP10.25□□□□□ -0.77
COL6A5-202ENST00000312481 AMER1Q5JTC6 1135 aaPredicted RBP10.25□□□□□ -0.77
COL6A5-202ENST00000312481 TTLL5Q6EMB2 1281 aa10.25□□□□□ -0.77
COL6A5-202ENST00000312481 LLPHQ9BRT6 129 aaKnown RBP10.25□□□□□ -0.77
COL6A5-202ENST00000312481 RRP7AQ9Y3A4 280 aaKnown RBP10.25□□□□□ -0.77
COL6A5-202ENST00000312481 EDC4Q6P2E9 1401 aaKnown RBP10.25□□□□□ -0.77
COL6A5-202ENST00000312481 PDRG1Q9NUG6 133 aa10.25□□□□□ -0.77
COL6A5-202ENST00000312481 SAFB2Q14151 953 aaKnown RBP eCLIP10.25□□□□□ -0.77
COL6A5-202ENST00000312481 ODF2Q5BJF6 829 aa10.25□□□□□ -0.77
COL6A5-202ENST00000312481 SLF2Q8IX21 1173 aa10.25□□□□□ -0.77
COL6A5-202ENST00000312481 CCAR2Q8N163 923 aaKnown RBP10.25□□□□□ -0.77
COL6A5-202ENST00000312481 CCDC43Q96MW1 224 aaKnown RBP10.25□□□□□ -0.77
COL6A5-202ENST00000312481 STK24Q9Y6E0 443 aa10.25□□□□□ -0.77
COL6A5-202ENST00000312481 SERPINC1P01008 464 aa10.24□□□□□ -0.77
COL6A5-202ENST00000312481 ME1P48163 572 aa10.24□□□□□ -0.77
COL6A5-202ENST00000312481 FAM200AQ8TCP9 573 aa10.24□□□□□ -0.77
COL6A5-202ENST00000312481 ZNF592Q92610 1267 aa10.24□□□□□ -0.77
COL6A5-202ENST00000312481 BRPF1P55201 1214 aaPredicted RBP10.24□□□□□ -0.77
COL6A5-202ENST00000312481 KRT222Q8N1A0 295 aa10.24□□□□□ -0.77
COL6A5-202ENST00000312481 AMPD3Q01432 767 aa10.24□□□□□ -0.77
COL6A5-202ENST00000312481 PCMTD1Q96MG8 357 aaPredicted RBP10.24□□□□□ -0.77
COL6A5-202ENST00000312481 FAM135BQ49AJ0 1406 aa10.24□□□□□ -0.77
COL6A5-202ENST00000312481 SF3B2Q13435 895 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms