RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 BEND3Q5T5X7 828 aa20.93■□□□□ 0.94
CLCF1-201ENST00000312438 USP44Q9H0E7 712 aa20.93■□□□□ 0.94
CLCF1-201ENST00000312438 HMMRO75330 724 aa20.92■□□□□ 0.94
CLCF1-201ENST00000312438 ANKRD45Q5TZF3 282 aa20.92■□□□□ 0.94
CLCF1-201ENST00000312438 ATP10DQ9P241 1426 aa20.92■□□□□ 0.94
CLCF1-201ENST00000312438 C8orf34Q49A92 452 aa20.92■□□□□ 0.94
CLCF1-201ENST00000312438 TMOD3Q9NYL9 352 aa20.92■□□□□ 0.94
CLCF1-201ENST00000312438 SPATA31A1Q5TZJ5 1347 aa20.91■□□□□ 0.94
CLCF1-201ENST00000312438 ADCY9O60503 1353 aa20.91■□□□□ 0.94
CLCF1-201ENST00000312438 CERKQ8TCT0 537 aa20.9■□□□□ 0.94
CLCF1-201ENST00000312438 MAP3K2Q9Y2U5 619 aa20.9■□□□□ 0.94
CLCF1-201ENST00000312438 JCADQ9P266 1359 aa20.9■□□□□ 0.94
CLCF1-201ENST00000312438 UBTFL1P0CB47 393 aaPredicted RBP20.9■□□□□ 0.94
CLCF1-201ENST00000312438 LNPKQ9C0E8 428 aa20.9■□□□□ 0.94
CLCF1-201ENST00000312438 ALDH1L1O75891 902 aa20.89■□□□□ 0.93
CLCF1-201ENST00000312438 MYL6BP14649 208 aa20.88■□□□□ 0.93
CLCF1-201ENST00000312438 ATP8B2P98198 1209 aa20.88■□□□□ 0.93
CLCF1-201ENST00000312438 AIMP1Q12904 312 aaKnown RBP20.88■□□□□ 0.93
CLCF1-201ENST00000312438 ERBB4Q15303 1308 aa20.87■□□□□ 0.93
CLCF1-201ENST00000312438 COPS6Q7L5N1 327 aa20.87■□□□□ 0.93
CLCF1-201ENST00000312438 SPATA31A5Q5VU36 1347 aa20.87■□□□□ 0.93
CLCF1-201ENST00000312438 SPATA31A7Q8IWB4 1347 aa20.87■□□□□ 0.93
CLCF1-201ENST00000312438 SLIT2O94813 1529 aa20.86■□□□□ 0.93
CLCF1-201ENST00000312438 LRP10Q7Z4F1 713 aa20.86■□□□□ 0.93
CLCF1-201ENST00000312438 RIC3Q7Z5B4 369 aa20.86■□□□□ 0.93
CLCF1-201ENST00000312438 XAGE3Q8WTP9 111 aa20.86■□□□□ 0.93
CLCF1-201ENST00000312438 PIGBQ92521 554 aa20.86■□□□□ 0.93
CLCF1-201ENST00000312438 ZBTB47Q9UFB7 747 aaPredicted RBP20.86■□□□□ 0.93
CLCF1-201ENST00000312438 PTCD1O75127 700 aaKnown RBP20.85■□□□□ 0.93
CLCF1-201ENST00000312438 BARGINQ6ZT62 677 aa20.85■□□□□ 0.93
CLCF1-201ENST00000312438 LINS1Q8NG48 757 aa20.85■□□□□ 0.93
CLCF1-201ENST00000312438 HDAC5Q9UQL6 1122 aa20.85■□□□□ 0.93
CLCF1-201ENST00000312438 LRRFIP2Q9Y608 721 aaKnown RBP20.85■□□□□ 0.93
CLCF1-201ENST00000312438 DDB1Q16531 1140 aa20.85■□□□□ 0.93
CLCF1-201ENST00000312438 UNC5CLQ8IV45 518 aa20.85■□□□□ 0.93
CLCF1-201ENST00000312438 SHANK3Q9BYB0 1731 aa20.85■□□□□ 0.93
CLCF1-201ENST00000312438 TNS2Q63HR2 1409 aa20.84■□□□□ 0.93
CLCF1-201ENST00000312438 ANKRD13DQ6ZTN6 518 aa20.84■□□□□ 0.93
CLCF1-201ENST00000312438 NGLY1Q96IV0 654 aa20.84■□□□□ 0.93
CLCF1-201ENST00000312438 CCDC9Q9Y3X0 531 aaKnown RBP20.84■□□□□ 0.93
CLCF1-201ENST00000312438 TEX13AQ9BXU3 409 aaPredicted RBP20.83■□□□□ 0.93
CLCF1-201ENST00000312438 SPATA31A6Q5VVP1 1343 aa20.83■□□□□ 0.92
CLCF1-201ENST00000312438 NBPF7P0C2Y1 421 aaPredicted RBP20.83■□□□□ 0.92
CLCF1-201ENST00000312438 NEXNQ0ZGT2 675 aa20.83■□□□□ 0.92
CLCF1-201ENST00000312438 VSIG10Q8N0Z9 540 aa20.83■□□□□ 0.92
CLCF1-201ENST00000312438 C9orf78Q9NZ63 289 aaPredicted RBP20.83■□□□□ 0.92
CLCF1-201ENST00000312438 PLCH1Q4KWH8 1693 aa20.82■□□□□ 0.92
CLCF1-201ENST00000312438 ANP32AP39687 249 aaKnown RBP20.82■□□□□ 0.92
CLCF1-201ENST00000312438 ATG3Q9NT62 314 aa20.82■□□□□ 0.92
CLCF1-201ENST00000312438 ASAP1Q9ULH1 1129 aa20.82■□□□□ 0.92
CLCF1-201ENST00000312438 METTL22Q9BUU2 404 aaPredicted RBP20.81■□□□□ 0.92
CLCF1-201ENST00000312438 KCPQ6ZWJ8 1503 aa20.81■□□□□ 0.92
CLCF1-201ENST00000312438 PNMA6EA0A0J9YXQ4 647 aa20.81■□□□□ 0.92
CLCF1-201ENST00000312438 C8orf37Q96NL8 207 aa20.81■□□□□ 0.92
CLCF1-201ENST00000312438 IBTKQ9P2D0 1353 aaPredicted RBP20.8■□□□□ 0.92
CLCF1-201ENST00000312438 C5P01031 1676 aa20.8■□□□□ 0.92
CLCF1-201ENST00000312438 NBPF26B4DH59 902 aa20.8■□□□□ 0.92
CLCF1-201ENST00000312438 PIP4K2AP48426 406 aaPredicted RBP20.8■□□□□ 0.92
CLCF1-201ENST00000312438 CWF19L2Q2TBE0 894 aaKnown RBP20.8■□□□□ 0.92
CLCF1-201ENST00000312438 NBPF14Q5TI25 921 aa20.8■□□□□ 0.92
CLCF1-201ENST00000312438 NBPF10Q6P3W6 841 aaKnown RBP20.8■□□□□ 0.92
CLCF1-201ENST00000312438 NBPF15Q8N660 670 aa20.8■□□□□ 0.92
CLCF1-201ENST00000312438 FNBP4Q8N3X1 1017 aaPredicted RBP20.79■□□□□ 0.92
CLCF1-201ENST00000312438 PLBD2Q8NHP8 589 aa20.79■□□□□ 0.92
CLCF1-201ENST00000312438 SSH3Q8TE77 659 aa20.79■□□□□ 0.92
CLCF1-201ENST00000312438 BCL9O00512 1426 aa20.79■□□□□ 0.92
CLCF1-201ENST00000312438 NRAPQ86VF7 1730 aa20.79■□□□□ 0.92
CLCF1-201ENST00000312438 A1BGP04217 495 aa20.78■□□□□ 0.92
CLCF1-201ENST00000312438 VPS72Q15906 364 aa20.78■□□□□ 0.92
CLCF1-201ENST00000312438 UTYO14607 1347 aa20.78■□□□□ 0.92
CLCF1-201ENST00000312438 IGKV5-2P06315 115 aa20.78■□□□□ 0.92
CLCF1-201ENST00000312438 PRIM1P49642 420 aaKnown RBP20.78■□□□□ 0.92
CLCF1-201ENST00000312438 PPP1R42Q7Z4L9 355 aa20.78■□□□□ 0.92
CLCF1-201ENST00000312438 N4BP2Q86UW6 1770 aaPredicted RBP20.78■□□□□ 0.92
CLCF1-201ENST00000312438 GRM8O00222 908 aa20.77■□□□□ 0.92
CLCF1-201ENST00000312438 POLA2Q14181 598 aa20.77■□□□□ 0.92
CLCF1-201ENST00000312438 SYTL4Q96C24 671 aaPredicted RBP20.77■□□□□ 0.92
CLCF1-201ENST00000312438 NWD2Q9ULI1 1742 aa20.77■□□□□ 0.92
CLCF1-201ENST00000312438 LRP6O75581 1613 aa20.76■□□□□ 0.91
CLCF1-201ENST00000312438 BMP2KLQ5H9B9 411 aa20.76■□□□□ 0.91
CLCF1-201ENST00000312438 MYD88Q99836 296 aa20.76■□□□□ 0.91
CLCF1-201ENST00000312438 GLI3P10071 1580 aa20.76■□□□□ 0.91
CLCF1-201ENST00000312438 PAPPAQ13219 1627 aa20.76■□□□□ 0.91
CLCF1-201ENST00000312438 NEURL1BA8MQ27 555 aa20.76■□□□□ 0.91
CLCF1-201ENST00000312438 STARD3NLO95772 234 aa20.76■□□□□ 0.91
CLCF1-201ENST00000312438 NPM2Q86SE8 214 aaKnown RBP20.76■□□□□ 0.91
CLCF1-201ENST00000312438 PLEKHM2Q8IWE5 1019 aa20.76■□□□□ 0.91
CLCF1-201ENST00000312438 MARCH10Q8NA82 808 aaPredicted RBP20.76■□□□□ 0.91
CLCF1-201ENST00000312438 RBM42Q9BTD8 480 aaKnown RBP20.76■□□□□ 0.91
CLCF1-201ENST00000312438 BCL9LQ86UU0 1499 aa20.76■□□□□ 0.91
CLCF1-201ENST00000312438 APBB1O00213 710 aa20.75■□□□□ 0.91
CLCF1-201ENST00000312438 MTX1Q13505 466 aa20.75■□□□□ 0.91
CLCF1-201ENST00000312438 EXOC6BQ9Y2D4 811 aa20.75■□□□□ 0.91
CLCF1-201ENST00000312438 TOGARAM1Q9Y4F4 1720 aa20.75■□□□□ 0.91
CLCF1-201ENST00000312438 UBR2Q8IWV8 1755 aa20.75■□□□□ 0.91
CLCF1-201ENST00000312438 SRGAP3O43295 1099 aa20.74■□□□□ 0.91
CLCF1-201ENST00000312438 GCKRQ14397 625 aa20.74■□□□□ 0.91
CLCF1-201ENST00000312438 DNAJC10Q8IXB1 793 aa20.74■□□□□ 0.91
CLCF1-201ENST00000312438 C16orf71Q8IYS4 520 aaPredicted RBP20.74■□□□□ 0.91
CLCF1-201ENST00000312438 LRRCC1Q9C099 1032 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms