RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 DLEC1Q9Y238 1755 aa11.29□□□□□ -0.6
MSL3-201ENST00000312196 HEG1Q9ULI3 1381 aa11.28□□□□□ -0.6
MSL3-201ENST00000312196 DPEP1P16444 411 aa11.28□□□□□ -0.6
MSL3-201ENST00000312196 NARFQ9UHQ1 456 aa11.28□□□□□ -0.6
MSL3-201ENST00000312196 TNRC6CQ9HCJ0 1690 aaKnown RBP11.28□□□□□ -0.6
MSL3-201ENST00000312196 KDM2BQ8NHM5 1336 aa11.28□□□□□ -0.6
MSL3-201ENST00000312196 HMOX1P09601 288 aa11.27□□□□□ -0.6
MSL3-201ENST00000312196 IL17REQ8NFR9 667 aa11.27□□□□□ -0.6
MSL3-201ENST00000312196 STARD3NLO95772 234 aa11.27□□□□□ -0.61
MSL3-201ENST00000312196 RALBP1Q15311 655 aa11.27□□□□□ -0.61
MSL3-201ENST00000312196 DALRD3Q5D0E6 543 aaKnown RBP11.27□□□□□ -0.61
MSL3-201ENST00000312196 BCORQ6W2J9 1755 aa11.27□□□□□ -0.61
MSL3-201ENST00000312196 POLRMTO00411 1230 aaKnown RBP11.26□□□□□ -0.61
MSL3-201ENST00000312196 EIF5P55010 431 aaKnown RBP11.26□□□□□ -0.61
MSL3-201ENST00000312196 DNAJC10Q8IXB1 793 aa11.26□□□□□ -0.61
MSL3-201ENST00000312196 JMYQ8N9B5 988 aa11.26□□□□□ -0.61
MSL3-201ENST00000312196 PNISRQ8TF01 805 aaKnown RBP11.26□□□□□ -0.61
MSL3-201ENST00000312196 LAMB4A4D0S4 1761 aa11.25□□□□□ -0.61
MSL3-201ENST00000312196 COL15A1P39059 1388 aa11.25□□□□□ -0.61
MSL3-201ENST00000312196 ZNF790Q6PG37 636 aa11.25□□□□□ -0.61
MSL3-201ENST00000312196 DNAJC5GQ8N7S2 189 aa11.25□□□□□ -0.61
MSL3-201ENST00000312196 FMNL2Q96PY5 1086 aa11.25□□□□□ -0.61
MSL3-201ENST00000312196 BABAM1Q9NWV8 329 aa11.25□□□□□ -0.61
MSL3-201ENST00000312196 N4BP2Q86UW6 1770 aaPredicted RBP11.25□□□□□ -0.61
MSL3-201ENST00000312196 IL6STP40189 918 aaPredicted RBP11.25□□□□□ -0.61
MSL3-201ENST00000312196 TEFQ10587 303 aa11.25□□□□□ -0.61
MSL3-201ENST00000312196 TTC5Q8N0Z6 440 aa11.25□□□□□ -0.61
MSL3-201ENST00000312196 BCS1LQ9Y276 419 aa11.25□□□□□ -0.61
MSL3-201ENST00000312196 KDM3BQ7LBC6 1761 aa11.25□□□□□ -0.61
MSL3-201ENST00000312196 SRCAPQ6ZRS2 3230 aa11.24□□□□□ -0.61
MSL3-201ENST00000312196 U2SURPO15042 1029 aaKnown RBP11.24□□□□□ -0.61
MSL3-201ENST00000312196 PTCD1O75127 700 aaKnown RBP11.24□□□□□ -0.61
MSL3-201ENST00000312196 PRKAR2BP31323 418 aa11.24□□□□□ -0.61
MSL3-201ENST00000312196 ARHGAP27Q6ZUM4 889 aa11.24□□□□□ -0.61
MSL3-201ENST00000312196 A0A0G2JLW4 131 aa11.24□□□□□ -0.61
MSL3-201ENST00000312196 DDR1Q08345 913 aa11.24□□□□□ -0.61
MSL3-201ENST00000312196 LTBP3Q9NS15 1303 aa11.23□□□□□ -0.61
MSL3-201ENST00000312196 AFDNP55196 1824 aaKnown RBP11.23□□□□□ -0.61
MSL3-201ENST00000312196 ZPR1O75312 459 aa11.23□□□□□ -0.61
MSL3-201ENST00000312196 C9orf131Q5VYM1 1079 aa11.23□□□□□ -0.61
MSL3-201ENST00000312196 WDR90Q96KV7 1748 aa11.23□□□□□ -0.61
MSL3-201ENST00000312196 ARFGEF2Q9Y6D5 1785 aa11.22□□□□□ -0.61
MSL3-201ENST00000312196 FKBP8Q14318 412 aa11.22□□□□□ -0.61
MSL3-201ENST00000312196 PHACTR3Q96KR7 559 aa11.21□□□□□ -0.61
MSL3-201ENST00000312196 PLEKHF1Q96S99 279 aa11.21□□□□□ -0.61
MSL3-201ENST00000312196 U2AF1L5P0DN76 240 aaPredicted RBP11.21□□□□□ -0.62
MSL3-201ENST00000312196 U2AF1Q01081 240 aaKnown RBP eCLIP11.21□□□□□ -0.62
MSL3-201ENST00000312196 CLEC4GQ6UXB4 293 aa11.21□□□□□ -0.62
MSL3-201ENST00000312196 C16orf71Q8IYS4 520 aaPredicted RBP11.21□□□□□ -0.62
MSL3-201ENST00000312196 SMC1BQ8NDV3 1235 aa11.21□□□□□ -0.62
MSL3-201ENST00000312196 ZNF496Q96IT1 587 aaPredicted RBP11.21□□□□□ -0.62
MSL3-201ENST00000312196 BCL2L12Q9HB09 334 aa11.21□□□□□ -0.62
MSL3-201ENST00000312196 SNRPA1P09661 255 aaKnown RBP11.2□□□□□ -0.62
MSL3-201ENST00000312196 LMNB1P20700 586 aa11.2□□□□□ -0.62
MSL3-201ENST00000312196 SLC39A6Q13433 755 aa11.2□□□□□ -0.62
MSL3-201ENST00000312196 SOGA3Q5TF21 947 aa11.2□□□□□ -0.62
MSL3-201ENST00000312196 RTF1Q92541 710 aaKnown RBP11.2□□□□□ -0.62
MSL3-201ENST00000312196 ZBTB1Q9Y2K1 713 aa11.2□□□□□ -0.62
MSL3-201ENST00000312196 ERBB4Q15303 1308 aa11.2□□□□□ -0.62
MSL3-201ENST00000312196 BTBD11A6QL63 1104 aa11.2□□□□□ -0.62
MSL3-201ENST00000312196 NEFMP07197 916 aa11.2□□□□□ -0.62
MSL3-201ENST00000312196 TAF7Q15545 349 aaPredicted RBP11.2□□□□□ -0.62
MSL3-201ENST00000312196 SMIM5Q71RC9 77 aa11.2□□□□□ -0.62
MSL3-201ENST00000312196 KLRG1Q96E93 195 aa11.2□□□□□ -0.62
MSL3-201ENST00000312196 SRP68Q9UHB9 627 aaKnown RBP11.2□□□□□ -0.62
MSL3-201ENST00000312196 DLG5Q8TDM6 1919 aa11.2□□□□□ -0.62
MSL3-201ENST00000312196 RIC1Q4ADV7 1423 aa11.2□□□□□ -0.62
MSL3-201ENST00000312196 SBF1O95248 1867 aa11.19□□□□□ -0.62
MSL3-201ENST00000312196 NFIXQ14938 502 aa11.19□□□□□ -0.62
MSL3-201ENST00000312196 NFE2L2Q16236 605 aa11.19□□□□□ -0.62
MSL3-201ENST00000312196 USPL1Q5W0Q7 1092 aa11.19□□□□□ -0.62
MSL3-201ENST00000312196 TTLL6Q8N841 843 aa11.19□□□□□ -0.62
MSL3-201ENST00000312196 IBTKQ9P2D0 1353 aaPredicted RBP11.19□□□□□ -0.62
MSL3-201ENST00000312196 BRIP1Q9BX63 1249 aa11.19□□□□□ -0.62
MSL3-201ENST00000312196 CARMIL3Q8ND23 1372 aa11.18□□□□□ -0.62
MSL3-201ENST00000312196 GLTPD2A6NH11 291 aa11.18□□□□□ -0.62
MSL3-201ENST00000312196 SERPINB2P05120 415 aa11.18□□□□□ -0.62
MSL3-201ENST00000312196 PDE6BP35913 854 aa11.18□□□□□ -0.62
MSL3-201ENST00000312196 STYK1Q6J9G0 422 aa11.18□□□□□ -0.62
MSL3-201ENST00000312196 RNF181Q9P0P0 153 aa11.18□□□□□ -0.62
MSL3-201ENST00000312196 H0YIN7 160 aa11.17□□□□□ -0.62
MSL3-201ENST00000312196 CAMTA2O94983 1202 aa11.17□□□□□ -0.62
MSL3-201ENST00000312196 VEGFAP15692 232 aaPredicted RBP11.17□□□□□ -0.62
MSL3-201ENST00000312196 LMOD3Q0VAK6 560 aa11.17□□□□□ -0.62
MSL3-201ENST00000312196 NMRK2Q9NPI5 230 aa11.17□□□□□ -0.62
MSL3-201ENST00000312196 ANKRD31Q8N7Z5 1873 aa11.17□□□□□ -0.62
MSL3-201ENST00000312196 MYBBP1AQ9BQG0 1328 aaKnown RBP11.17□□□□□ -0.62
MSL3-201ENST00000312196 KLRG2A4D1S0 409 aaPredicted RBP11.16□□□□□ -0.62
MSL3-201ENST00000312196 ZNF526Q8TF50 670 aaPredicted RBP11.16□□□□□ -0.62
MSL3-201ENST00000312196 ERVV-1B6SEH8 477 aa11.15□□□□□ -0.62
MSL3-201ENST00000312196 CNKSR1Q969H4 720 aa11.15□□□□□ -0.62
MSL3-201ENST00000312196 ZNF652Q9Y2D9 606 aa11.15□□□□□ -0.62
MSL3-201ENST00000312196 GRIPAP1Q4V328 841 aa11.15□□□□□ -0.62
MSL3-201ENST00000312196 NCBP3Q53F19 620 aaKnown RBP11.15□□□□□ -0.62
MSL3-201ENST00000312196 C2CD5Q86YS7 1000 aa11.15□□□□□ -0.62
MSL3-201ENST00000312196 DICER1Q9UPY3 1922 aaKnown RBP11.15□□□□□ -0.62
MSL3-201ENST00000312196 CANXP27824 592 aaKnown RBP11.14□□□□□ -0.63
MSL3-201ENST00000312196 CHRNA5P30532 468 aa11.13□□□□□ -0.63
MSL3-201ENST00000312196 DPY19L2Q6NUT2 758 aa11.13□□□□□ -0.63
MSL3-201ENST00000312196 MAPK8IP3Q9UPT6 1336 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms