RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 PPFIBP1Q86W92 1011 aa11.63□□□□□ -0.55
TMOD3-201ENST00000308580 GUCY1B3Q02153 619 aa11.63□□□□□ -0.55
TMOD3-201ENST00000308580 UNC13AQ9UPW8 1703 aa11.63□□□□□ -0.55
TMOD3-201ENST00000308580 MINDY4BA8MYZ0 360 aa11.63□□□□□ -0.55
TMOD3-201ENST00000308580 MRPL50Q8N5N7 158 aaKnown RBP11.63□□□□□ -0.55
TMOD3-201ENST00000308580 RHPN1Q8TCX5 695 aa11.63□□□□□ -0.55
TMOD3-201ENST00000308580 SDSP20132 328 aa11.63□□□□□ -0.55
TMOD3-201ENST00000308580 CCDC112Q8NEF3 446 aa11.63□□□□□ -0.55
TMOD3-201ENST00000308580 NAPBQ9H115 298 aa11.63□□□□□ -0.55
TMOD3-201ENST00000308580 SNRKQ9NRH2 765 aa11.63□□□□□ -0.55
TMOD3-201ENST00000308580 ZSCAN30Q86W11 494 aa11.62□□□□□ -0.55
TMOD3-201ENST00000308580 TSPYL6Q8N831 410 aa11.62□□□□□ -0.55
TMOD3-201ENST00000308580 ANKRD44Q8N8A2 993 aa11.62□□□□□ -0.55
TMOD3-201ENST00000308580 WASF1Q92558 559 aa11.62□□□□□ -0.55
TMOD3-201ENST00000308580 FAM177A1Q8N128 213 aaPredicted RBP11.62□□□□□ -0.55
TMOD3-201ENST00000308580 ZHX3Q9H4I2 956 aa11.62□□□□□ -0.55
TMOD3-201ENST00000308580 PPIP5K1Q6PFW1 1433 aa11.62□□□□□ -0.55
TMOD3-201ENST00000308580 GOLIM4O00461 696 aa11.62□□□□□ -0.55
TMOD3-201ENST00000308580 STIM1Q13586 685 aa11.62□□□□□ -0.55
TMOD3-201ENST00000308580 CCDC82Q8N4S0 544 aa11.62□□□□□ -0.55
TMOD3-201ENST00000308580 CHPF2Q9P2E5 772 aa11.62□□□□□ -0.55
TMOD3-201ENST00000308580 ADAMTS2O95450 1211 aa11.61□□□□□ -0.55
TMOD3-201ENST00000308580 PHACTR3Q96KR7 559 aa11.61□□□□□ -0.55
TMOD3-201ENST00000308580 TTC21AQ8NDW8 1320 aa11.61□□□□□ -0.55
TMOD3-201ENST00000308580 ZNHIT6Q9NWK9 470 aaKnown RBP11.61□□□□□ -0.55
TMOD3-201ENST00000308580 C8orf76Q96K31 380 aa11.61□□□□□ -0.55
TMOD3-201ENST00000308580 UHRF1BP1LA0JNW5 1464 aa11.61□□□□□ -0.55
TMOD3-201ENST00000308580 RBM5P52756 815 aaKnown RBP eCLIP11.61□□□□□ -0.55
TMOD3-201ENST00000308580 CCDC183Q5T5S1 534 aa11.61□□□□□ -0.55
TMOD3-201ENST00000308580 KRT24Q2M2I5 525 aa11.61□□□□□ -0.55
TMOD3-201ENST00000308580 BAG4O95429 457 aaKnown RBP11.61□□□□□ -0.55
TMOD3-201ENST00000308580 PDE1AP54750 535 aa11.61□□□□□ -0.55
TMOD3-201ENST00000308580 ZNF652Q9Y2D9 606 aa11.61□□□□□ -0.55
TMOD3-201ENST00000308580 HMGB1P09429 215 aaKnown RBP11.61□□□□□ -0.55
TMOD3-201ENST00000308580 CCT2P78371 535 aaKnown RBP11.61□□□□□ -0.55
TMOD3-201ENST00000308580 C8orf34Q49A92 452 aa11.61□□□□□ -0.55
TMOD3-201ENST00000308580 AK7Q96M32 723 aa11.61□□□□□ -0.55
TMOD3-201ENST00000308580 CBFA2T2O43439 604 aa11.6□□□□□ -0.55
TMOD3-201ENST00000308580 VAMP4O75379 141 aa11.6□□□□□ -0.55
TMOD3-201ENST00000308580 MAP3K12Q12852 859 aa11.6□□□□□ -0.55
TMOD3-201ENST00000308580 DHX8Q14562 1220 aaKnown RBP11.6□□□□□ -0.55
TMOD3-201ENST00000308580 SSBP05455 408 aaKnown RBP eCLIP11.6□□□□□ -0.55
TMOD3-201ENST00000308580 HSP90AB3PQ58FF7 597 aa11.6□□□□□ -0.55
TMOD3-201ENST00000308580 TFIP11Q9UBB9 837 aaKnown RBP11.6□□□□□ -0.55
TMOD3-201ENST00000308580 WDR62O43379 1518 aa11.6□□□□□ -0.55
TMOD3-201ENST00000308580 ZNF213O14771 459 aa11.6□□□□□ -0.55
TMOD3-201ENST00000308580 ZSCAN29Q8IWY8 852 aaPredicted RBP11.6□□□□□ -0.55
TMOD3-201ENST00000308580 PUS7Q96PZ0 661 aaKnown RBP11.6□□□□□ -0.55
TMOD3-201ENST00000308580 ZNF518AQ6AHZ1 1483 aa11.6□□□□□ -0.55
TMOD3-201ENST00000308580 ANKRD18BA2A2Z9 1011 aa11.6□□□□□ -0.55
TMOD3-201ENST00000308580 SNRPA1P09661 255 aaKnown RBP11.6□□□□□ -0.55
TMOD3-201ENST00000308580 ANKRD13DQ6ZTN6 518 aa11.6□□□□□ -0.55
TMOD3-201ENST00000308580 MTHFSDQ2M296 383 aaKnown RBP11.6□□□□□ -0.55
TMOD3-201ENST00000308580 LDHAL6AQ6ZMR3 332 aa11.6□□□□□ -0.55
TMOD3-201ENST00000308580 C16orf71Q8IYS4 520 aaPredicted RBP11.6□□□□□ -0.55
TMOD3-201ENST00000308580 CAVIN4Q5BKX8 364 aa11.6□□□□□ -0.55
TMOD3-201ENST00000308580 RIMS2Q9UQ26 1411 aa11.6□□□□□ -0.55
TMOD3-201ENST00000308580 ZFYVE27Q5T4F4 411 aa11.59□□□□□ -0.55
TMOD3-201ENST00000308580 CKAP2LQ8IYA6 745 aa11.59□□□□□ -0.55
TMOD3-201ENST00000308580 KIAA0556O60303 1618 aa11.59□□□□□ -0.55
TMOD3-201ENST00000308580 ITSN2Q9NZM3 1697 aa11.59□□□□□ -0.55
TMOD3-201ENST00000308580 STX6O43752 255 aa11.59□□□□□ -0.55
TMOD3-201ENST00000308580 GJB2P29033 226 aa11.59□□□□□ -0.55
TMOD3-201ENST00000308580 CWC25Q9NXE8 425 aaPredicted RBP11.59□□□□□ -0.55
TMOD3-201ENST00000308580 PIK3C2GO75747 1445 aa11.59□□□□□ -0.55
TMOD3-201ENST00000308580 SLC39A6Q13433 755 aa11.59□□□□□ -0.55
TMOD3-201ENST00000308580 PZPP20742 1482 aa11.59□□□□□ -0.55
TMOD3-201ENST00000308580 CFAP100Q494V2 611 aa11.59□□□□□ -0.55
TMOD3-201ENST00000308580 PPFIA3O75145 1194 aa11.59□□□□□ -0.55
TMOD3-201ENST00000308580 ODF2Q5BJF6 829 aa11.59□□□□□ -0.55
TMOD3-201ENST00000308580 NCKAP5LQ9HCH0 1330 aa11.59□□□□□ -0.55
TMOD3-201ENST00000308580 PPP1R1BQ9UD71 204 aaPredicted RBP11.59□□□□□ -0.55
TMOD3-201ENST00000308580 WDR7Q9Y4E6 1490 aa11.58□□□□□ -0.55
TMOD3-201ENST00000308580 GOLGA8BA8MQT2 603 aa11.58□□□□□ -0.56
TMOD3-201ENST00000308580 SMTNL1A8MU46 457 aa11.58□□□□□ -0.56
TMOD3-201ENST00000308580 EXOC5O00471 708 aa11.58□□□□□ -0.56
TMOD3-201ENST00000308580 TANGO6Q9C0B7 1094 aa11.58□□□□□ -0.56
TMOD3-201ENST00000308580 UQCRHLA0A096LP55 91 aa11.58□□□□□ -0.56
TMOD3-201ENST00000308580 UQCRHP07919 91 aa11.58□□□□□ -0.56
TMOD3-201ENST00000308580 XAGE3Q8WTP9 111 aa11.58□□□□□ -0.56
TMOD3-201ENST00000308580 TMX3Q96JJ7 454 aa11.58□□□□□ -0.56
TMOD3-201ENST00000308580 USP25Q9UHP3 1055 aa11.58□□□□□ -0.56
TMOD3-201ENST00000308580 A0A1W2PP64 1363 aa11.58□□□□□ -0.56
TMOD3-201ENST00000308580 SLC5A1P13866 664 aa11.58□□□□□ -0.56
TMOD3-201ENST00000308580 HAND2P61296 217 aa11.58□□□□□ -0.56
TMOD3-201ENST00000308580 COPS6Q7L5N1 327 aa11.58□□□□□ -0.56
TMOD3-201ENST00000308580 DDX46Q7L014 1031 aaKnown RBP11.57□□□□□ -0.56
TMOD3-201ENST00000308580 CADPS2Q86UW7 1296 aa11.57□□□□□ -0.56
TMOD3-201ENST00000308580 RANBP6O60518 1105 aaKnown RBP11.57□□□□□ -0.56
TMOD3-201ENST00000308580 ZPR1O75312 459 aa11.57□□□□□ -0.56
TMOD3-201ENST00000308580 ATP8B2P98198 1209 aa11.57□□□□□ -0.56
TMOD3-201ENST00000308580 SETQ01105 290 aaPredicted RBP11.57□□□□□ -0.56
TMOD3-201ENST00000308580 ERCC4Q92889 916 aaPredicted RBP11.57□□□□□ -0.56
TMOD3-201ENST00000308580 CCDC196A0A1B0GTZ2 297 aa11.57□□□□□ -0.56
TMOD3-201ENST00000308580 DEF6Q9H4E7 631 aa11.57□□□□□ -0.56
TMOD3-201ENST00000308580 USP5P45974 858 aa11.57□□□□□ -0.56
TMOD3-201ENST00000308580 CDR1P51861 262 aa11.57□□□□□ -0.56
TMOD3-201ENST00000308580 IFIT3O14879 490 aaKnown RBP11.57□□□□□ -0.56
TMOD3-201ENST00000308580 TCEANC2Q96MN5 208 aa11.57□□□□□ -0.56
TMOD3-201ENST00000308580 ANO10Q9NW15 660 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms