RNA–Protein interactions for RNA: ENST00000307731.1

CDC40-201, Transcript of cell division cycle 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC40, Length 3,848 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-201ENST00000307731 DNAJC10Q8IXB1 793 aa9.27□□□□□ -0.93
CDC40-201ENST00000307731 DNAAF4Q8WXU2 420 aa9.27□□□□□ -0.93
CDC40-201ENST00000307731 ASAP1Q9ULH1 1129 aa9.27□□□□□ -0.93
CDC40-201ENST00000307731 NHSL1Q5SYE7 1610 aa9.27□□□□□ -0.93
CDC40-201ENST00000307731 OVOS2A0A0G2JMS6 1433 aa9.26□□□□□ -0.93
CDC40-201ENST00000307731 HMGB2P26583 209 aaKnown RBP9.26□□□□□ -0.93
CDC40-201ENST00000307731 RTL5Q5HYW3 569 aaPredicted RBP9.26□□□□□ -0.93
CDC40-201ENST00000307731 XAGE3Q8WTP9 111 aa9.26□□□□□ -0.93
CDC40-201ENST00000307731 AK7Q96M32 723 aa9.26□□□□□ -0.93
CDC40-201ENST00000307731 PI4KAP2A4QPH2 592 aa9.26□□□□□ -0.93
CDC40-201ENST00000307731 COPS6Q7L5N1 327 aa9.26□□□□□ -0.93
CDC40-201ENST00000307731 PI4KAP1Q8N8J0 262 aa9.26□□□□□ -0.93
CDC40-201ENST00000307731 PHRF1Q9P1Y6 1649 aaKnown RBP9.26□□□□□ -0.93
CDC40-201ENST00000307731 GIGYF1O75420 1035 aaPredicted RBP9.26□□□□□ -0.93
CDC40-201ENST00000307731 TRMT2AQ8IZ69 625 aaKnown RBP9.26□□□□□ -0.93
CDC40-201ENST00000307731 C1orf115Q9H7X2 142 aa9.26□□□□□ -0.93
CDC40-201ENST00000307731 FAM196AQ6ZSG2 479 aa9.25□□□□□ -0.93
CDC40-201ENST00000307731 FNBP4Q8N3X1 1017 aaPredicted RBP9.25□□□□□ -0.93
CDC40-201ENST00000307731 PIGBQ92521 554 aa9.25□□□□□ -0.93
CDC40-201ENST00000307731 MYD88Q99836 296 aa9.25□□□□□ -0.93
CDC40-201ENST00000307731 DDX21Q9NR30 783 aaKnown RBP eCLIP9.25□□□□□ -0.93
CDC40-201ENST00000307731 CCNL1Q9UK58 526 aaPredicted RBP9.25□□□□□ -0.93
CDC40-201ENST00000307731 BCL11BQ9C0K0 894 aaPredicted RBP9.25□□□□□ -0.93
CDC40-201ENST00000307731 MAP3K2Q9Y2U5 619 aa9.25□□□□□ -0.93
CDC40-201ENST00000307731 USP16Q9Y5T5 823 aa9.25□□□□□ -0.93
CDC40-201ENST00000307731 AAMPQ13685 434 aa9.24□□□□□ -0.93
CDC40-201ENST00000307731 PHAXQ9H814 394 aaKnown RBP9.24□□□□□ -0.93
CDC40-201ENST00000307731 COL14A1Q05707 1796 aaKnown RBP9.24□□□□□ -0.93
CDC40-201ENST00000307731 ZPR1O75312 459 aa9.24□□□□□ -0.93
CDC40-201ENST00000307731 TRIM37O94972 964 aa9.24□□□□□ -0.93
CDC40-201ENST00000307731 A1BGP04217 495 aa9.24□□□□□ -0.93
CDC40-201ENST00000307731 ANKRD13DQ6ZTN6 518 aa9.24□□□□□ -0.93
CDC40-201ENST00000307731 G2E3Q7L622 706 aa9.24□□□□□ -0.93
CDC40-201ENST00000307731 MARCH10Q8NA82 808 aaPredicted RBP9.24□□□□□ -0.93
CDC40-201ENST00000307731 ARHGAP45Q92619 1136 aa9.24□□□□□ -0.93
CDC40-201ENST00000307731 TNNQ9UQP3 1299 aa9.24□□□□□ -0.93
CDC40-201ENST00000307731 PHF14O94880 888 aa9.24□□□□□ -0.93
CDC40-201ENST00000307731 GNAI2P04899 355 aa9.24□□□□□ -0.93
CDC40-201ENST00000307731 BICDL1Q6ZP65 573 aa9.24□□□□□ -0.93
CDC40-201ENST00000307731 ZNF652Q9Y2D9 606 aa9.24□□□□□ -0.93
CDC40-201ENST00000307731 APBA3O96018 575 aa9.23□□□□□ -0.93
CDC40-201ENST00000307731 LOC102724428A0A0B4J2F2 783 aa9.23□□□□□ -0.93
CDC40-201ENST00000307731 ATP5J2-PTCD1G3V325 749 aa9.23□□□□□ -0.93
CDC40-201ENST00000307731 SIK1P57059 783 aa9.23□□□□□ -0.93
CDC40-201ENST00000307731 PRAMEF22A3QJZ6 481 aa9.22□□□□□ -0.93
CDC40-201ENST00000307731 GPTP24298 496 aa9.22□□□□□ -0.93
CDC40-201ENST00000307731 CENPQQ7L2Z9 268 aaPredicted RBP9.22□□□□□ -0.93
CDC40-201ENST00000307731 COL16A1Q07092 1604 aaPredicted RBP9.22□□□□□ -0.93
CDC40-201ENST00000307731 HSP90AB3PQ58FF7 597 aa9.22□□□□□ -0.93
CDC40-201ENST00000307731 KSR2Q6VAB6 950 aa9.22□□□□□ -0.93
CDC40-201ENST00000307731 TBC1D2BQ9UPU7 963 aa9.22□□□□□ -0.93
CDC40-201ENST00000307731 ABCC6O95255 1503 aa9.22□□□□□ -0.93
CDC40-201ENST00000307731 RGPD5Q99666 1765 aa9.22□□□□□ -0.93
CDC40-201ENST00000307731 HEG1Q9ULI3 1381 aa9.22□□□□□ -0.93
CDC40-201ENST00000307731 KCNQ2O43526 872 aa9.22□□□□□ -0.93
CDC40-201ENST00000307731 GNPATO15228 680 aa9.21□□□□□ -0.93
CDC40-201ENST00000307731 DZIP3Q86Y13 1208 aaKnown RBP9.21□□□□□ -0.93
CDC40-201ENST00000307731 CCDC87Q9NVE4 849 aa9.21□□□□□ -0.93
CDC40-201ENST00000307731 RTCBQ9Y3I0 505 aaKnown RBP9.21□□□□□ -0.93
CDC40-201ENST00000307731 CEMIPQ8WUJ3 1361 aa9.21□□□□□ -0.93
CDC40-201ENST00000307731 PALLDQ8WX93 1383 aa9.21□□□□□ -0.93
CDC40-201ENST00000307731 A0A087WZG4 1122 aa9.21□□□□□ -0.94
CDC40-201ENST00000307731 RFC4P35249 363 aa9.21□□□□□ -0.94
CDC40-201ENST00000307731 ANKRD45Q5TZF3 282 aa9.21□□□□□ -0.94
CDC40-201ENST00000307731 TNS2Q63HR2 1409 aa9.21□□□□□ -0.94
CDC40-201ENST00000307731 RLBP1P12271 317 aa9.21□□□□□ -0.94
CDC40-201ENST00000307731 ATG3Q9NT62 314 aa9.21□□□□□ -0.94
CDC40-201ENST00000307731 HSP90B1P14625 803 aaKnown RBP9.2□□□□□ -0.94
CDC40-201ENST00000307731 NKX1-1Q15270 411 aaPredicted RBP9.2□□□□□ -0.94
CDC40-201ENST00000307731 MYCNP04198 464 aaPredicted RBP9.2□□□□□ -0.94
CDC40-201ENST00000307731 KCNQ4P56696 695 aa9.2□□□□□ -0.94
CDC40-201ENST00000307731 G3BP1Q13283 466 aaKnown RBP eCLIP9.2□□□□□ -0.94
CDC40-201ENST00000307731 KDM6AO15550 1401 aaPredicted RBP9.19□□□□□ -0.94
CDC40-201ENST00000307731 TMX4Q9H1E5 349 aaPredicted RBP9.19□□□□□ -0.94
CDC40-201ENST00000307731 UPF2Q9HAU5 1272 aaKnown RBP9.19□□□□□ -0.94
CDC40-201ENST00000307731 TFCP2L1Q9NZI6 479 aa9.19□□□□□ -0.94
CDC40-201ENST00000307731 ERBB4Q15303 1308 aa9.19□□□□□ -0.94
CDC40-201ENST00000307731 ATXN8OSP0DMR3 200 aa9.19□□□□□ -0.94
CDC40-201ENST00000307731 BAG6P46379 1132 aa9.19□□□□□ -0.94
CDC40-201ENST00000307731 GORABQ5T7V8 394 aa9.19□□□□□ -0.94
CDC40-201ENST00000307731 LINS1Q8NG48 757 aa9.19□□□□□ -0.94
CDC40-201ENST00000307731 CWC25Q9NXE8 425 aaPredicted RBP9.19□□□□□ -0.94
CDC40-201ENST00000307731 TRMT112Q9UI30 125 aaKnown RBP9.19□□□□□ -0.94
CDC40-201ENST00000307731 RGPD2P0DJD1 1756 aa9.19□□□□□ -0.94
CDC40-201ENST00000307731 SURF6O75683 361 aaKnown RBP9.19□□□□□ -0.94
CDC40-201ENST00000307731 PROSER3Q2NL68 480 aa9.19□□□□□ -0.94
CDC40-201ENST00000307731 UBE3BQ7Z3V4 1068 aa9.19□□□□□ -0.94
CDC40-201ENST00000307731 MEIS3Q99687 375 aa9.19□□□□□ -0.94
CDC40-201ENST00000307731 FAM208AQ9UK61 1670 aaKnown RBP9.19□□□□□ -0.94
CDC40-201ENST00000307731 SRGAP3O43295 1099 aa9.18□□□□□ -0.94
CDC40-201ENST00000307731 CWF19L2Q2TBE0 894 aaKnown RBP9.18□□□□□ -0.94
CDC40-201ENST00000307731 CCDC85AQ96PX6 553 aaPredicted RBP9.18□□□□□ -0.94
CDC40-201ENST00000307731 ZBTB1Q9Y2K1 713 aa9.18□□□□□ -0.94
CDC40-201ENST00000307731 LRRFIP2Q9Y608 721 aaKnown RBP9.18□□□□□ -0.94
CDC40-201ENST00000307731 ALDH1L1O75891 902 aa9.18□□□□□ -0.94
CDC40-201ENST00000307731 SLIT2O94813 1529 aa9.18□□□□□ -0.94
CDC40-201ENST00000307731 HSP90AB4PQ58FF6 505 aa9.18□□□□□ -0.94
CDC40-201ENST00000307731 KLHL34Q8N239 644 aa9.18□□□□□ -0.94
CDC40-201ENST00000307731 JARID2Q92833 1246 aaPredicted RBP9.18□□□□□ -0.94
CDC40-201ENST00000307731 RNF216Q9NWF9 866 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms