RNA–Protein interactions for RNA: ENST00000304992.10

PRPF8-201, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF8, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-201ENST00000304992 PTPN23Q9H3S7 1636 aa11.89□□□□□ -0.51
PRPF8-201ENST00000304992 F8W031 263 aaPredicted RBP11.88□□□□□ -0.51
PRPF8-201ENST00000304992 IQCA1Q86XH1 822 aa11.88□□□□□ -0.51
PRPF8-201ENST00000304992 CFAP45Q9UL16 551 aa11.88□□□□□ -0.51
PRPF8-201ENST00000304992 ATP6V1AP38606 617 aa11.88□□□□□ -0.51
PRPF8-201ENST00000304992 ZSCAN31Q96LW9 406 aaPredicted RBP11.88□□□□□ -0.51
PRPF8-201ENST00000304992 CDC5LQ99459 802 aaKnown RBP11.88□□□□□ -0.51
PRPF8-201ENST00000304992 CWC25Q9NXE8 425 aaPredicted RBP11.88□□□□□ -0.51
PRPF8-201ENST00000304992 GOLIM4O00461 696 aa11.88□□□□□ -0.51
PRPF8-201ENST00000304992 ST5P78524 1137 aa11.88□□□□□ -0.51
PRPF8-201ENST00000304992 FLIIQ13045 1269 aa11.88□□□□□ -0.51
PRPF8-201ENST00000304992 ABCC5O15440 1437 aa11.88□□□□□ -0.51
PRPF8-201ENST00000304992 LAMC3Q9Y6N6 1575 aa11.88□□□□□ -0.51
PRPF8-201ENST00000304992 ANKRD62A6NC57 917 aa11.88□□□□□ -0.51
PRPF8-201ENST00000304992 TNRQ92752 1358 aa11.87□□□□□ -0.51
PRPF8-201ENST00000304992 CAMK4Q16566 473 aa11.87□□□□□ -0.51
PRPF8-201ENST00000304992 CCDC181Q5TID7 509 aa11.87□□□□□ -0.51
PRPF8-201ENST00000304992 PPP1R42Q7Z4L9 355 aa11.87□□□□□ -0.51
PRPF8-201ENST00000304992 IQSEC3Q9UPP2 1182 aaPredicted RBP11.87□□□□□ -0.51
PRPF8-201ENST00000304992 SLF2Q8IX21 1173 aa11.87□□□□□ -0.51
PRPF8-201ENST00000304992 IFIT3O14879 490 aaKnown RBP11.87□□□□□ -0.51
PRPF8-201ENST00000304992 PPFIA3O75145 1194 aa11.87□□□□□ -0.51
PRPF8-201ENST00000304992 SLC39A6Q13433 755 aa11.87□□□□□ -0.51
PRPF8-201ENST00000304992 CUL5Q93034 780 aa11.87□□□□□ -0.51
PRPF8-201ENST00000304992 SLC12A7Q9Y666 1083 aa11.87□□□□□ -0.51
PRPF8-201ENST00000304992 ABCA10Q8WWZ4 1543 aa11.87□□□□□ -0.51
PRPF8-201ENST00000304992 PI4KAP2A4QPH2 592 aa11.87□□□□□ -0.51
PRPF8-201ENST00000304992 PI4KAP1Q8N8J0 262 aa11.87□□□□□ -0.51
PRPF8-201ENST00000304992 LUC7LQ9NQ29 371 aaKnown RBP11.87□□□□□ -0.51
PRPF8-201ENST00000304992 SPDYE4A6NLX3 237 aa11.86□□□□□ -0.51
PRPF8-201ENST00000304992 EIF5P55010 431 aaKnown RBP11.86□□□□□ -0.51
PRPF8-201ENST00000304992 SKAP1Q86WV1 359 aa11.86□□□□□ -0.51
PRPF8-201ENST00000304992 RARSP54136 660 aaKnown RBP11.86□□□□□ -0.51
PRPF8-201ENST00000304992 CCT2P78371 535 aaKnown RBP11.86□□□□□ -0.51
PRPF8-201ENST00000304992 KLHL10Q6JEL2 608 aa11.86□□□□□ -0.51
PRPF8-201ENST00000304992 RAB11FIP4Q86YS3 637 aa11.86□□□□□ -0.51
PRPF8-201ENST00000304992 CLEC11AQ9Y240 323 aa11.86□□□□□ -0.51
PRPF8-201ENST00000304992 ZNF608Q9ULD9 1512 aaPredicted RBP11.86□□□□□ -0.51
PRPF8-201ENST00000304992 HAND2P61296 217 aa11.86□□□□□ -0.51
PRPF8-201ENST00000304992 PPP4R3AQ6IN85 833 aa11.86□□□□□ -0.51
PRPF8-201ENST00000304992 ZCRB1Q8TBF4 217 aaKnown RBP11.86□□□□□ -0.51
PRPF8-201ENST00000304992 RSPH6AQ9H0K4 717 aa11.86□□□□□ -0.51
PRPF8-201ENST00000304992 TSHZ3Q63HK5 1081 aa11.86□□□□□ -0.51
PRPF8-201ENST00000304992 TMEM87AQ8NBN3 555 aa11.86□□□□□ -0.51
PRPF8-201ENST00000304992 CEP131Q9UPN4 1083 aa11.86□□□□□ -0.51
PRPF8-201ENST00000304992 C11orf95C9JLR9 678 aaPredicted RBP11.85□□□□□ -0.51
PRPF8-201ENST00000304992 C20orf194Q5TEA3 1177 aa11.85□□□□□ -0.51
PRPF8-201ENST00000304992 TEX13AQ9BXU3 409 aaPredicted RBP11.85□□□□□ -0.51
PRPF8-201ENST00000304992 NUP62CLQ9H1M0 184 aa11.85□□□□□ -0.51
PRPF8-201ENST00000304992 NLRP5P59047 1200 aa11.85□□□□□ -0.51
PRPF8-201ENST00000304992 AXDND1Q5T1B0 1012 aaPredicted RBP11.85□□□□□ -0.51
PRPF8-201ENST00000304992 VSIG10Q8N0Z9 540 aa11.85□□□□□ -0.51
PRPF8-201ENST00000304992 SETDB2Q96T68 719 aa11.85□□□□□ -0.51
PRPF8-201ENST00000304992 SNRPA1P09661 255 aaKnown RBP11.85□□□□□ -0.51
PRPF8-201ENST00000304992 FILIP1Q7Z7B0 1213 aa11.84□□□□□ -0.51
PRPF8-201ENST00000304992 PPM1FP49593 454 aaPredicted RBP11.84□□□□□ -0.51
PRPF8-201ENST00000304992 TTC21BQ7Z4L5 1316 aa11.84□□□□□ -0.51
PRPF8-201ENST00000304992 TSPY2A6NKD2 308 aa11.84□□□□□ -0.51
PRPF8-201ENST00000304992 GOLGA8BA8MQT2 603 aa11.84□□□□□ -0.51
PRPF8-201ENST00000304992 ENOX2Q16206 610 aaKnown RBP11.84□□□□□ -0.51
PRPF8-201ENST00000304992 DDB1Q16531 1140 aa11.84□□□□□ -0.51
PRPF8-201ENST00000304992 ALDH1L2Q3SY69 923 aa11.84□□□□□ -0.51
PRPF8-201ENST00000304992 C8orf76Q96K31 380 aa11.84□□□□□ -0.51
PRPF8-201ENST00000304992 GOLGA8AA7E2F4 631 aa11.84□□□□□ -0.51
PRPF8-201ENST00000304992 CENPHQ9H3R5 247 aa11.84□□□□□ -0.51
PRPF8-201ENST00000304992 CCDC196A0A1B0GTZ2 297 aa11.84□□□□□ -0.51
PRPF8-201ENST00000304992 MYO1BO43795 1136 aa11.84□□□□□ -0.51
PRPF8-201ENST00000304992 SEPT7Q16181 437 aaKnown RBP11.84□□□□□ -0.51
PRPF8-201ENST00000304992 CABP5Q9NP86 173 aa11.84□□□□□ -0.51
PRPF8-201ENST00000304992 ERLIN2O94905 339 aa11.83□□□□□ -0.52
PRPF8-201ENST00000304992 CATIPQ7Z7H3 387 aa11.83□□□□□ -0.52
PRPF8-201ENST00000304992 DESP17661 470 aa11.83□□□□□ -0.52
PRPF8-201ENST00000304992 CCP110O43303 1012 aa11.83□□□□□ -0.52
PRPF8-201ENST00000304992 ERCC4Q92889 916 aaPredicted RBP11.83□□□□□ -0.52
PRPF8-201ENST00000304992 BAG3O95817 575 aa11.83□□□□□ -0.52
PRPF8-201ENST00000304992 LRRC59Q96AG4 307 aaKnown RBP11.83□□□□□ -0.52
PRPF8-201ENST00000304992 NPHP3Q7Z494 1330 aa11.83□□□□□ -0.52
PRPF8-201ENST00000304992 NCKAP5LQ9HCH0 1330 aa11.83□□□□□ -0.52
PRPF8-201ENST00000304992 CUL7Q14999 1698 aa11.83□□□□□ -0.52
PRPF8-201ENST00000304992 CCDC194A0A1B0GVG4 234 aa11.82□□□□□ -0.52
PRPF8-201ENST00000304992 PPP1R12BO60237 982 aaPredicted RBP11.82□□□□□ -0.52
PRPF8-201ENST00000304992 RBM26Q5T8P6 1007 aaKnown RBP11.82□□□□□ -0.52
PRPF8-201ENST00000304992 ANKRD13DQ6ZTN6 518 aa11.82□□□□□ -0.52
PRPF8-201ENST00000304992 BACH2Q9BYV9 841 aa11.82□□□□□ -0.52
PRPF8-201ENST00000304992 MBIPQ9NS73 344 aa11.82□□□□□ -0.52
PRPF8-201ENST00000304992 SAMM50Q9Y512 469 aa11.82□□□□□ -0.52
PRPF8-201ENST00000304992 TRIM21P19474 475 aaKnown RBP11.82□□□□□ -0.52
PRPF8-201ENST00000304992 SSRP1Q08945 709 aaKnown RBP11.82□□□□□ -0.52
PRPF8-201ENST00000304992 RNF41Q9H4P4 317 aaPredicted RBP11.82□□□□□ -0.52
PRPF8-201ENST00000304992 C14orf93Q9H972 538 aaKnown RBP11.82□□□□□ -0.52
PRPF8-201ENST00000304992 TFCP2L1Q9NZI6 479 aa11.82□□□□□ -0.52
PRPF8-201ENST00000304992 HLA-DOAP06340 250 aa11.82□□□□□ -0.52
PRPF8-201ENST00000304992 CCDC152Q4G0S7 254 aa11.82□□□□□ -0.52
PRPF8-201ENST00000304992 CHPF2Q9P2E5 772 aa11.82□□□□□ -0.52
PRPF8-201ENST00000304992 CBFA2T2O43439 604 aa11.82□□□□□ -0.52
PRPF8-201ENST00000304992 CFAP100Q494V2 611 aa11.82□□□□□ -0.52
PRPF8-201ENST00000304992 KIAA1328Q86T90 577 aa11.81□□□□□ -0.52
PRPF8-201ENST00000304992 CCDC97Q96F63 343 aaPredicted RBP11.81□□□□□ -0.52
PRPF8-201ENST00000304992 NIP7Q9Y221 180 aaKnown RBP eCLIP11.81□□□□□ -0.52
PRPF8-201ENST00000304992 LDHCP07864 332 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms