RNA–Protein interactions for RNA: ENST00000304749.6

CST1-201, Transcript of cystatin SN, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CST1, Length 760 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CST1-201ENST00000304749 COL15A1P39059 1388 aa18.35■□□□□ 0.53
CST1-201ENST00000304749 POLRMTO00411 1230 aaKnown RBP18.35■□□□□ 0.53
CST1-201ENST00000304749 STARD3NLO95772 234 aa18.35■□□□□ 0.53
CST1-201ENST00000304749 ZNF790Q6PG37 636 aa18.35■□□□□ 0.53
CST1-201ENST00000304749 FCHSD2O94868 740 aa18.34■□□□□ 0.53
CST1-201ENST00000304749 U2AF1L5P0DN76 240 aaPredicted RBP18.34■□□□□ 0.53
CST1-201ENST00000304749 KCNA3P22001 575 aa18.34■□□□□ 0.53
CST1-201ENST00000304749 CANXP27824 592 aaKnown RBP18.34■□□□□ 0.53
CST1-201ENST00000304749 U2AF1Q01081 240 aaKnown RBP eCLIP18.34■□□□□ 0.53
CST1-201ENST00000304749 ZNF496Q96IT1 587 aaPredicted RBP18.34■□□□□ 0.53
CST1-201ENST00000304749 KIAA1551Q9HCM1 1747 aa18.34■□□□□ 0.53
CST1-201ENST00000304749 ARHGAP27Q6ZUM4 889 aa18.33■□□□□ 0.52
CST1-201ENST00000304749 ZNF526Q8TF50 670 aaPredicted RBP18.33■□□□□ 0.52
CST1-201ENST00000304749 PIM2Q9P1W9 311 aa18.33■□□□□ 0.52
CST1-201ENST00000304749 CEMIPQ8WUJ3 1361 aa18.32■□□□□ 0.52
CST1-201ENST00000304749 HEG1Q9ULI3 1381 aa18.32■□□□□ 0.52
CST1-201ENST00000304749 NFIXQ14938 502 aa18.32■□□□□ 0.52
CST1-201ENST00000304749 TEX13AQ9BXU3 409 aaPredicted RBP18.32■□□□□ 0.52
CST1-201ENST00000304749 BCL2L12Q9HB09 334 aa18.32■□□□□ 0.52
CST1-201ENST00000304749 EIF5P55010 431 aaKnown RBP18.31■□□□□ 0.52
CST1-201ENST00000304749 FMNL2Q96PY5 1086 aa18.31■□□□□ 0.52
CST1-201ENST00000304749 N4BP2Q86UW6 1770 aaPredicted RBP18.31■□□□□ 0.52
CST1-201ENST00000304749 A0A087WZG4 1122 aa18.3■□□□□ 0.52
CST1-201ENST00000304749 BTBD11A6QL63 1104 aa18.3■□□□□ 0.52
CST1-201ENST00000304749 DALRD3Q5D0E6 543 aaKnown RBP18.3■□□□□ 0.52
CST1-201ENST00000304749 UBR2Q8IWV8 1755 aa18.3■□□□□ 0.52
CST1-201ENST00000304749 CHRNA5P30532 468 aa18.29■□□□□ 0.52
CST1-201ENST00000304749 RTF1Q92541 710 aaKnown RBP18.29■□□□□ 0.52
CST1-201ENST00000304749 VIRMAQ69YN4 1812 aaKnown RBP18.28■□□□□ 0.52
CST1-201ENST00000304749 KCNQ3O43525 872 aa18.27■□□□□ 0.52
CST1-201ENST00000304749 SERPINB2P05120 415 aa18.27■□□□□ 0.52
CST1-201ENST00000304749 A1BGP04217 495 aa18.26■□□□□ 0.51
CST1-201ENST00000304749 IL6STP40189 918 aaPredicted RBP18.26■□□□□ 0.51
CST1-201ENST00000304749 MCM10Q7L590 875 aa18.26■□□□□ 0.51
CST1-201ENST00000304749 ZNF330Q9Y3S2 320 aaPredicted RBP18.26■□□□□ 0.51
CST1-201ENST00000304749 HTATSF1O43719 755 aaKnown RBP18.25■□□□□ 0.51
CST1-201ENST00000304749 BICDL1Q6ZP65 573 aa18.25■□□□□ 0.51
CST1-201ENST00000304749 NPM2Q86SE8 214 aaKnown RBP18.24■□□□□ 0.51
CST1-201ENST00000304749 TBC1D2BQ9UPU7 963 aa18.24■□□□□ 0.51
CST1-201ENST00000304749 SIPA1L3O60292 1781 aaPredicted RBP18.24■□□□□ 0.51
CST1-201ENST00000304749 KIF3CO14782 793 aa18.23■□□□□ 0.51
CST1-201ENST00000304749 DCTN1Q14203 1278 aa18.23■□□□□ 0.51
CST1-201ENST00000304749 C9orf131Q5VYM1 1079 aa18.23■□□□□ 0.51
CST1-201ENST00000304749 TBC1D9BQ66K14 1250 aa18.23■□□□□ 0.51
CST1-201ENST00000304749 USP16Q9Y5T5 823 aa18.23■□□□□ 0.51
CST1-201ENST00000304749 BRCA1P38398 1863 aaKnown RBP18.22■□□□□ 0.51
CST1-201ENST00000304749 NEFMP07197 916 aa18.21■□□□□ 0.51
CST1-201ENST00000304749 SNRPA1P09661 255 aaKnown RBP18.21■□□□□ 0.51
CST1-201ENST00000304749 C2CD5Q86YS7 1000 aa18.21■□□□□ 0.51
CST1-201ENST00000304749 NRXN2Q9P2S2 1712 aa18.2■□□□□ 0.5
CST1-201ENST00000304749 CARMIL3Q8ND23 1372 aa18.2■□□□□ 0.5
CST1-201ENST00000304749 PRAMEF22A3QJZ6 481 aa18.2■□□□□ 0.5
CST1-201ENST00000304749 H0YIN7 160 aa18.2■□□□□ 0.5
CST1-201ENST00000304749 CAMTA2O94983 1202 aa18.2■□□□□ 0.5
CST1-201ENST00000304749 TAF7Q15545 349 aaPredicted RBP18.19■□□□□ 0.5
CST1-201ENST00000304749 DZIP3Q86Y13 1208 aaKnown RBP18.19■□□□□ 0.5
CST1-201ENST00000304749 TTLL6Q8N841 843 aa18.19■□□□□ 0.5
CST1-201ENST00000304749 RNF181Q9P0P0 153 aa18.19■□□□□ 0.5
CST1-201ENST00000304749 ARFGEF1Q9Y6D6 1849 aa18.19■□□□□ 0.5
CST1-201ENST00000304749 HSPA6P17066 643 aa18.18■□□□□ 0.5
CST1-201ENST00000304749 PIP4K2AP48426 406 aaPredicted RBP18.18■□□□□ 0.5
CST1-201ENST00000304749 PLEKHF1Q96S99 279 aa18.18■□□□□ 0.5
CST1-201ENST00000304749 SETDB2Q96T68 719 aa18.18■□□□□ 0.5
CST1-201ENST00000304749 BRIP1Q9BX63 1249 aa18.18■□□□□ 0.5
CST1-201ENST00000304749 PDZRN3Q9UPQ7 1066 aa18.18■□□□□ 0.5
CST1-201ENST00000304749 PRR5LQ6MZQ0 368 aa18.17■□□□□ 0.5
CST1-201ENST00000304749 NMRK2Q9NPI5 230 aa18.17■□□□□ 0.5
CST1-201ENST00000304749 AFDNP55196 1824 aaKnown RBP18.16■□□□□ 0.5
CST1-201ENST00000304749 SCN7AQ01118 1682 aa18.16■□□□□ 0.5
CST1-201ENST00000304749 PDE6BP35913 854 aa18.16■□□□□ 0.5
CST1-201ENST00000304749 PNNQ9H307 717 aaKnown RBP18.16■□□□□ 0.5
CST1-201ENST00000304749 MIS18AQ9NYP9 233 aa18.16■□□□□ 0.5
CST1-201ENST00000304749 TOMM70O94826 608 aa18.15■□□□□ 0.5
CST1-201ENST00000304749 RASSF7Q02833 373 aa18.15■□□□□ 0.5
CST1-201ENST00000304749 CLEC4GQ6UXB4 293 aa18.15■□□□□ 0.5
CST1-201ENST00000304749 CCDC24Q8N4L8 307 aa18.15■□□□□ 0.5
CST1-201ENST00000304749 CNBD1Q8NA66 436 aa18.15■□□□□ 0.5
CST1-201ENST00000304749 PNISRQ8TF01 805 aaKnown RBP18.15■□□□□ 0.5
CST1-201ENST00000304749 ZNF622Q969S3 477 aaKnown RBP eCLIP18.15■□□□□ 0.5
CST1-201ENST00000304749 NPHP1O15259 732 aa18.14■□□□□ 0.49
CST1-201ENST00000304749 NFE2L2Q16236 605 aa18.14■□□□□ 0.49
CST1-201ENST00000304749 ZNF652Q9Y2D9 606 aa18.14■□□□□ 0.49
CST1-201ENST00000304749 KDM2BQ8NHM5 1336 aa18.14■□□□□ 0.49
CST1-201ENST00000304749 NBPF26B4DH59 902 aa18.13■□□□□ 0.49
CST1-201ENST00000304749 ST5P78524 1137 aa18.13■□□□□ 0.49
CST1-201ENST00000304749 NBPF10Q6P3W6 841 aaKnown RBP18.13■□□□□ 0.49
CST1-201ENST00000304749 NBPF15Q8N660 670 aa18.13■□□□□ 0.49
CST1-201ENST00000304749 MAPK8IP3Q9UPT6 1336 aa18.13■□□□□ 0.49
CST1-201ENST00000304749 LMNB1P20700 586 aa18.12■□□□□ 0.49
CST1-201ENST00000304749 RALBP1Q15311 655 aa18.12■□□□□ 0.49
CST1-201ENST00000304749 ZC3H4Q9UPT8 1303 aaKnown RBP18.12■□□□□ 0.49
CST1-201ENST00000304749 RGL2O15211 777 aa18.11■□□□□ 0.49
CST1-201ENST00000304749 THUMPD2Q9BTF0 503 aaKnown RBP18.11■□□□□ 0.49
CST1-201ENST00000304749 DLEC1Q9Y238 1755 aa18.1■□□□□ 0.49
CST1-201ENST00000304749 NFKBIEO00221 500 aa18.1■□□□□ 0.49
CST1-201ENST00000304749 PRELPP51888 382 aa18.1■□□□□ 0.49
CST1-201ENST00000304749 NBPF5PQ86XG9 351 aaPredicted RBP18.1■□□□□ 0.49
CST1-201ENST00000304749 C16orf71Q8IYS4 520 aaPredicted RBP18.1■□□□□ 0.49
CST1-201ENST00000304749 CEP350Q5VT06 3117 aa18.09■□□□□ 0.49
CST1-201ENST00000304749 C21orf2O43822 256 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms