RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 PKP1Q13835 747 aa29.3■■■□□ 2.28
FOXA3-201ENST00000302177 HSP90AB4PQ58FF6 505 aa29.3■■■□□ 2.28
FOXA3-201ENST00000302177 PPP1R42Q7Z4L9 355 aa29.3■■■□□ 2.28
FOXA3-201ENST00000302177 USHBP1Q8N6Y0 703 aa29.3■■■□□ 2.28
FOXA3-201ENST00000302177 KIF1BPQ96EK5 621 aa29.3■■■□□ 2.28
FOXA3-201ENST00000302177 BEND3Q5T5X7 828 aa29.29■■■□□ 2.28
FOXA3-201ENST00000302177 ANO2Q9NQ90 1003 aa29.29■■■□□ 2.28
FOXA3-201ENST00000302177 AMOTQ4VCS5 1084 aa29.28■■■□□ 2.28
FOXA3-201ENST00000302177 PLEKHO1Q53GL0 409 aaPredicted RBP29.28■■■□□ 2.28
FOXA3-201ENST00000302177 RHPN1Q8TCX5 695 aa29.28■■■□□ 2.28
FOXA3-201ENST00000302177 DNAAF4Q8WXU2 420 aa29.28■■■□□ 2.28
FOXA3-201ENST00000302177 LMO7Q8WWI1 1683 aa29.28■■■□□ 2.28
FOXA3-201ENST00000302177 SURF6O75683 361 aaKnown RBP29.28■■■□□ 2.28
FOXA3-201ENST00000302177 CCDC173Q0VFZ6 552 aa29.28■■■□□ 2.28
FOXA3-201ENST00000302177 PPP1R9BQ96SB3 815 aa29.28■■■□□ 2.28
FOXA3-201ENST00000302177 AK9Q5TCS8 1911 aa29.27■■■□□ 2.28
FOXA3-201ENST00000302177 LGR6Q9HBX8 967 aa29.27■■■□□ 2.28
FOXA3-201ENST00000302177 OVOS2A0A0G2JMS6 1433 aa29.27■■■□□ 2.28
FOXA3-201ENST00000302177 NCAPD2Q15021 1401 aa29.27■■■□□ 2.28
FOXA3-201ENST00000302177 PSME1Q06323 249 aa29.26■■■□□ 2.28
FOXA3-201ENST00000302177 TRIM44Q96DX7 344 aaPredicted RBP29.26■■■□□ 2.28
FOXA3-201ENST00000302177 TMEM94Q12767 1356 aa29.26■■■□□ 2.27
FOXA3-201ENST00000302177 UNC5CLQ8IV45 518 aa29.25■■■□□ 2.27
FOXA3-201ENST00000302177 PALD1Q9ULE6 856 aa29.25■■■□□ 2.27
FOXA3-201ENST00000302177 ESPNB1AK53 854 aa29.24■■■□□ 2.27
FOXA3-201ENST00000302177 EIF2S2P20042 333 aaKnown RBP29.24■■■□□ 2.27
FOXA3-201ENST00000302177 HSPA4P34932 840 aa29.24■■■□□ 2.27
FOXA3-201ENST00000302177 NASPP49321 788 aaPredicted RBP29.24■■■□□ 2.27
FOXA3-201ENST00000302177 TEFQ10587 303 aa29.24■■■□□ 2.27
FOXA3-201ENST00000302177 ANP32BQ92688 251 aaKnown RBP29.24■■■□□ 2.27
FOXA3-201ENST00000302177 HDAC5Q9UQL6 1122 aa29.24■■■□□ 2.27
FOXA3-201ENST00000302177 SRGAP3O43295 1099 aa29.24■■■□□ 2.27
FOXA3-201ENST00000302177 PI4K2BQ8TCG2 481 aa29.24■■■□□ 2.27
FOXA3-201ENST00000302177 IL1RAPL2Q9NP60 686 aa29.24■■■□□ 2.27
FOXA3-201ENST00000302177 CHPF2Q9P2E5 772 aa29.24■■■□□ 2.27
FOXA3-201ENST00000302177 USP42Q9H9J4 1324 aaKnown RBP29.23■■■□□ 2.27
FOXA3-201ENST00000302177 BRD1O95696 1058 aa29.23■■■□□ 2.27
FOXA3-201ENST00000302177 MTX1Q13505 466 aa29.23■■■□□ 2.27
FOXA3-201ENST00000302177 PI4KAP2A4QPH2 592 aa29.22■■■□□ 2.27
FOXA3-201ENST00000302177 PRPF40AO75400 957 aaKnown RBP29.22■■■□□ 2.27
FOXA3-201ENST00000302177 ZSCAN23Q3MJ62 389 aa29.22■■■□□ 2.27
FOXA3-201ENST00000302177 PI4KAP1Q8N8J0 262 aa29.22■■■□□ 2.27
FOXA3-201ENST00000302177 BTBD11A6QL63 1104 aa29.22■■■□□ 2.27
FOXA3-201ENST00000302177 DBF4Q9UBU7 674 aaPredicted RBP29.22■■■□□ 2.27
FOXA3-201ENST00000302177 NBPF7P0C2Y1 421 aaPredicted RBP29.21■■■□□ 2.27
FOXA3-201ENST00000302177 CAVIN1Q6NZI2 390 aaKnown RBP29.21■■■□□ 2.27
FOXA3-201ENST00000302177 NUTM1Q86Y26 1132 aa29.21■■■□□ 2.27
FOXA3-201ENST00000302177 ZNF530Q6P9A1 599 aaPredicted RBP29.21■■■□□ 2.27
FOXA3-201ENST00000302177 ALDH1L1O75891 902 aa29.2■■■□□ 2.26
FOXA3-201ENST00000302177 ESCO1Q5FWF5 840 aa29.2■■■□□ 2.26
FOXA3-201ENST00000302177 CNTROBQ8N137 903 aa29.2■■■□□ 2.26
FOXA3-201ENST00000302177 TTC41PQ6P2S7 1318 aa29.2■■■□□ 2.26
FOXA3-201ENST00000302177 UBAP1LF5GYI3 381 aa29.19■■■□□ 2.26
FOXA3-201ENST00000302177 SGSM2O43147 1006 aa29.19■■■□□ 2.26
FOXA3-201ENST00000302177 PLEKHG5O94827 1062 aa29.19■■■□□ 2.26
FOXA3-201ENST00000302177 MBD3O95983 291 aa29.19■■■□□ 2.26
FOXA3-201ENST00000302177 NCLP19338 710 aaKnown RBP29.19■■■□□ 2.26
FOXA3-201ENST00000302177 RNMTO43148 476 aaKnown RBP29.18■■■□□ 2.26
FOXA3-201ENST00000302177 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.18■■■□□ 2.26
FOXA3-201ENST00000302177 ADCY9O60503 1353 aa29.18■■■□□ 2.26
FOXA3-201ENST00000302177 HEG1Q9ULI3 1381 aa29.18■■■□□ 2.26
FOXA3-201ENST00000302177 ARHGEF25Q86VW2 580 aa29.17■■■□□ 2.26
FOXA3-201ENST00000302177 GPT2Q8TD30 523 aa29.17■■■□□ 2.26
FOXA3-201ENST00000302177 FBXO41Q8TF61 875 aa29.17■■■□□ 2.26
FOXA3-201ENST00000302177 SLIT3O75094 1523 aa29.17■■■□□ 2.26
FOXA3-201ENST00000302177 RAD50Q92878 1312 aa29.17■■■□□ 2.26
FOXA3-201ENST00000302177 KCNQ3O43525 872 aa29.16■■■□□ 2.26
FOXA3-201ENST00000302177 C1orf141Q5JVX7 400 aa29.16■■■□□ 2.26
FOXA3-201ENST00000302177 ILDR1Q86SU0 546 aaPredicted RBP29.15■■■□□ 2.26
FOXA3-201ENST00000302177 XIRP1Q702N8 1843 aaKnown RBP29.15■■■□□ 2.26
FOXA3-201ENST00000302177 GLRX3O76003 335 aaKnown RBP29.14■■■□□ 2.26
FOXA3-201ENST00000302177 GCP02774 474 aa29.14■■■□□ 2.26
FOXA3-201ENST00000302177 CRYBG1Q9Y4K1 1723 aa29.14■■■□□ 2.25
FOXA3-201ENST00000302177 KSR2Q6VAB6 950 aa29.13■■■□□ 2.25
FOXA3-201ENST00000302177 GIGYF1O75420 1035 aaPredicted RBP29.13■■■□□ 2.25
FOXA3-201ENST00000302177 MPRIPQ6WCQ1 1025 aa29.13■■■□□ 2.25
FOXA3-201ENST00000302177 ERC1Q8IUD2 1116 aa29.13■■■□□ 2.25
FOXA3-201ENST00000302177 LRRC59Q96AG4 307 aaKnown RBP29.12■■■□□ 2.25
FOXA3-201ENST00000302177 IL25Q9H293 177 aa29.12■■■□□ 2.25
FOXA3-201ENST00000302177 LSG1Q9H089 658 aaKnown RBP29.12■■■□□ 2.25
FOXA3-201ENST00000302177 RGPD2P0DJD1 1756 aa29.11■■■□□ 2.25
FOXA3-201ENST00000302177 PIP4K2BP78356 416 aa29.11■■■□□ 2.25
FOXA3-201ENST00000302177 HS1BP3Q53T59 392 aa29.11■■■□□ 2.25
FOXA3-201ENST00000302177 CLASRPQ8N2M8 674 aaKnown RBP29.11■■■□□ 2.25
FOXA3-201ENST00000302177 KIAA1211Q6ZU35 1233 aa29.1■■■□□ 2.25
FOXA3-201ENST00000302177 RUFY2Q8WXA3 655 aa29.1■■■□□ 2.25
FOXA3-201ENST00000302177 HYPKQ9NX55 129 aa29.1■■■□□ 2.25
FOXA3-201ENST00000302177 CAMTA1Q9Y6Y1 1673 aa29.1■■■□□ 2.25
FOXA3-201ENST00000302177 WDR33Q9C0J8 1336 aaKnown RBP29.1■■■□□ 2.25
FOXA3-201ENST00000302177 LRSAM1Q6UWE0 723 aa29.1■■■□□ 2.25
FOXA3-201ENST00000302177 UPF3BQ9BZI7 483 aaKnown RBP29.1■■■□□ 2.25
FOXA3-201ENST00000302177 ERBB4Q15303 1308 aa29.09■■■□□ 2.25
FOXA3-201ENST00000302177 TOM1O60784 492 aa29.09■■■□□ 2.25
FOXA3-201ENST00000302177 SNX14Q9Y5W7 946 aa29.09■■■□□ 2.25
FOXA3-201ENST00000302177 C9orf78Q9NZ63 289 aaPredicted RBP29.08■■■□□ 2.25
FOXA3-201ENST00000302177 MAP3K2Q9Y2U5 619 aa29.08■■■□□ 2.25
FOXA3-201ENST00000302177 TTC14Q96N46 770 aa29.08■■■□□ 2.25
FOXA3-201ENST00000302177 UTYO14607 1347 aa29.07■■■□□ 2.24
FOXA3-201ENST00000302177 PRIM1P49642 420 aaKnown RBP29.07■■■□□ 2.24
FOXA3-201ENST00000302177 ANKRD24Q8TF21 1146 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms