RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ANKLE2Q86XL3 938 aa15.73■□□□□ 0.11
HIF3A-204ENST00000300862 ORAI2Q96SN7 254 aa15.73■□□□□ 0.11
HIF3A-204ENST00000300862 CWC22Q9HCG8 908 aaKnown RBP15.73■□□□□ 0.11
HIF3A-204ENST00000300862 BTBD11A6QL63 1104 aa15.73■□□□□ 0.11
HIF3A-204ENST00000300862 ESPNB1AK53 854 aa15.73■□□□□ 0.11
HIF3A-204ENST00000300862 PRPF40AO75400 957 aaKnown RBP15.73■□□□□ 0.11
HIF3A-204ENST00000300862 CAVIN1Q6NZI2 390 aaKnown RBP15.73■□□□□ 0.11
HIF3A-204ENST00000300862 LMBRD1Q9NUN5 540 aa15.73■□□□□ 0.11
HIF3A-204ENST00000300862 ISY1Q9ULR0 285 aaKnown RBP15.72■□□□□ 0.11
HIF3A-204ENST00000300862 BEND3Q5T5X7 828 aa15.72■□□□□ 0.11
HIF3A-204ENST00000300862 RHPN1Q8TCX5 695 aa15.72■□□□□ 0.11
HIF3A-204ENST00000300862 DNAAF4Q8WXU2 420 aa15.72■□□□□ 0.11
HIF3A-204ENST00000300862 PRAMEF22A3QJZ6 481 aa15.71■□□□□ 0.11
HIF3A-204ENST00000300862 LTN1O94822 1766 aa15.71■□□□□ 0.11
HIF3A-204ENST00000300862 MCCP23508 829 aa15.7■□□□□ 0.1
HIF3A-204ENST00000300862 POLA2Q14181 598 aa15.7■□□□□ 0.1
HIF3A-204ENST00000300862 PROSER3Q2NL68 480 aa15.7■□□□□ 0.1
HIF3A-204ENST00000300862 RBM27Q9P2N5 1060 aaKnown RBP15.7■□□□□ 0.1
HIF3A-204ENST00000300862 GCP02774 474 aa15.69■□□□□ 0.1
HIF3A-204ENST00000300862 FOXD4L6Q3SYB3 417 aaPredicted RBP15.69■□□□□ 0.1
HIF3A-204ENST00000300862 FOXD4L3Q6VB84 417 aaPredicted RBP15.69■□□□□ 0.1
HIF3A-204ENST00000300862 CACNA1FO60840 1977 aa15.69■□□□□ 0.1
HIF3A-204ENST00000300862 AKAP4Q5JQC9 854 aa15.69■□□□□ 0.1
HIF3A-204ENST00000300862 KCNH5Q8NCM2 988 aa15.69■□□□□ 0.1
HIF3A-204ENST00000300862 PI4K2BQ8TCG2 481 aa15.69■□□□□ 0.1
HIF3A-204ENST00000300862 NFAT5O94916 1531 aa15.69■□□□□ 0.1
HIF3A-204ENST00000300862 RGPD2P0DJD1 1756 aa15.68■□□□□ 0.1
HIF3A-204ENST00000300862 HSP90AA2PQ14568 343 aaPredicted RBP15.68■□□□□ 0.1
HIF3A-204ENST00000300862 PLEKHO1Q53GL0 409 aaPredicted RBP15.68■□□□□ 0.1
HIF3A-204ENST00000300862 ADCY9O60503 1353 aa15.68■□□□□ 0.1
HIF3A-204ENST00000300862 PXDNLA1KZ92 1463 aa15.68■□□□□ 0.1
HIF3A-204ENST00000300862 RRP9O43818 475 aaKnown RBP15.68■□□□□ 0.1
HIF3A-204ENST00000300862 RAB11FIP3O75154 756 aa15.68■□□□□ 0.1
HIF3A-204ENST00000300862 OS9Q13438 667 aaPredicted RBP15.68■□□□□ 0.1
HIF3A-204ENST00000300862 GPT2Q8TD30 523 aa15.68■□□□□ 0.1
HIF3A-204ENST00000300862 RNMTO43148 476 aaKnown RBP15.67■□□□□ 0.1
HIF3A-204ENST00000300862 ZSCAN23Q3MJ62 389 aa15.67■□□□□ 0.1
HIF3A-204ENST00000300862 C1orf141Q5JVX7 400 aa15.67■□□□□ 0.1
HIF3A-204ENST00000300862 KIF1BPQ96EK5 621 aa15.67■□□□□ 0.1
HIF3A-204ENST00000300862 LARP6Q9BRS8 491 aaKnown RBP15.67■□□□□ 0.1
HIF3A-204ENST00000300862 AXIN2Q9Y2T1 843 aa15.67■□□□□ 0.1
HIF3A-204ENST00000300862 NASPP49321 788 aaPredicted RBP15.67■□□□□ 0.1
HIF3A-204ENST00000300862 CWF19L2Q2TBE0 894 aaKnown RBP15.67■□□□□ 0.1
HIF3A-204ENST00000300862 NSFL1CQ9UNZ2 370 aaKnown RBP15.67■□□□□ 0.1
HIF3A-204ENST00000300862 MAP3K2Q9Y2U5 619 aa15.67■□□□□ 0.1
HIF3A-204ENST00000300862 TUBGCP6Q96RT7 1819 aa15.66■□□□□ 0.1
HIF3A-204ENST00000300862 GLIPR1L2Q4G1C9 344 aa15.66■□□□□ 0.1
HIF3A-204ENST00000300862 ANKRD24Q8TF21 1146 aa15.66■□□□□ 0.1
HIF3A-204ENST00000300862 PA2G4Q9UQ80 394 aaKnown RBP15.66■□□□□ 0.1
HIF3A-204ENST00000300862 PXDNQ92626 1479 aa15.66■□□□□ 0.1
HIF3A-204ENST00000300862 CWC27Q6UX04 472 aaKnown RBP15.66■□□□□ 0.1
HIF3A-204ENST00000300862 ARHGEF25Q86VW2 580 aa15.66■□□□□ 0.1
HIF3A-204ENST00000300862 TRIM44Q96DX7 344 aaPredicted RBP15.66■□□□□ 0.1
HIF3A-204ENST00000300862 C9orf78Q9NZ63 289 aaPredicted RBP15.65■□□□□ 0.1
HIF3A-204ENST00000300862 DBF4Q9UBU7 674 aaPredicted RBP15.65■□□□□ 0.1
HIF3A-204ENST00000300862 HOXB7P09629 217 aa15.65■□□□□ 0.1
HIF3A-204ENST00000300862 ANAPC15P60006 121 aa15.65■□□□□ 0.1
HIF3A-204ENST00000300862 AIMP1Q12904 312 aaKnown RBP15.65■□□□□ 0.1
HIF3A-204ENST00000300862 SPG7Q9UQ90 795 aa15.65■□□□□ 0.1
HIF3A-204ENST00000300862 AOX1Q06278 1338 aa15.64■□□□□ 0.09
HIF3A-204ENST00000300862 DTNBO60941 627 aa15.64■□□□□ 0.09
HIF3A-204ENST00000300862 GIGYF1O75420 1035 aaPredicted RBP15.64■□□□□ 0.09
HIF3A-204ENST00000300862 MCM2P49736 904 aa15.64■□□□□ 0.09
HIF3A-204ENST00000300862 CUL4AQ13619 759 aa15.64■□□□□ 0.09
HIF3A-204ENST00000300862 USP54Q70EL1 1684 aa15.64■□□□□ 0.09
HIF3A-204ENST00000300862 HSPA4P34932 840 aa15.64■□□□□ 0.09
HIF3A-204ENST00000300862 CHD2O14647 1828 aaKnown RBP15.64■□□□□ 0.09
HIF3A-204ENST00000300862 SGSM2O43147 1006 aa15.63■□□□□ 0.09
HIF3A-204ENST00000300862 ZC3H6P61129 1189 aaKnown RBP15.63■□□□□ 0.09
HIF3A-204ENST00000300862 ADGRL3Q9HAR2 1447 aa15.63■□□□□ 0.09
HIF3A-204ENST00000300862 PRIM1P49642 420 aaKnown RBP15.63■□□□□ 0.09
HIF3A-204ENST00000300862 AMOTQ4VCS5 1084 aa15.63■□□□□ 0.09
HIF3A-204ENST00000300862 RASEFQ8IZ41 740 aa15.63■□□□□ 0.09
HIF3A-204ENST00000300862 BRD1O95696 1058 aa15.62■□□□□ 0.09
HIF3A-204ENST00000300862 CPA1P15085 419 aa15.62■□□□□ 0.09
HIF3A-204ENST00000300862 ZNF445P59923 1031 aa15.62■□□□□ 0.09
HIF3A-204ENST00000300862 VSIG10Q8N0Z9 540 aa15.62■□□□□ 0.09
HIF3A-204ENST00000300862 CNTROBQ8N137 903 aa15.62■□□□□ 0.09
HIF3A-204ENST00000300862 RBSNQ9H1K0 784 aa15.62■□□□□ 0.09
HIF3A-204ENST00000300862 GDPD2Q9HCC8 539 aa15.62■□□□□ 0.09
HIF3A-204ENST00000300862 TMEM63CQ9P1W3 806 aa15.62■□□□□ 0.09
HIF3A-204ENST00000300862 MED1Q15648 1581 aaPredicted RBP15.62■□□□□ 0.09
HIF3A-204ENST00000300862 SLC39A6Q13433 755 aa15.62■□□□□ 0.09
HIF3A-204ENST00000300862 SNX14Q9Y5W7 946 aa15.61■□□□□ 0.09
HIF3A-204ENST00000300862 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.61■□□□□ 0.09
HIF3A-204ENST00000300862 TPRNQ4KMQ1 711 aa15.61■□□□□ 0.09
HIF3A-204ENST00000300862 KSR2Q6VAB6 950 aa15.61■□□□□ 0.09
HIF3A-204ENST00000300862 LSG1Q9H089 658 aaKnown RBP15.61■□□□□ 0.09
HIF3A-204ENST00000300862 RAD50Q92878 1312 aa15.6■□□□□ 0.09
HIF3A-204ENST00000300862 N4BP2Q86UW6 1770 aaPredicted RBP15.6■□□□□ 0.09
HIF3A-204ENST00000300862 SYCE3A1L190 88 aa15.6■□□□□ 0.09
HIF3A-204ENST00000300862 CLASRPQ8N2M8 674 aaKnown RBP15.6■□□□□ 0.09
HIF3A-204ENST00000300862 KDM3BQ7LBC6 1761 aa15.6■□□□□ 0.09
HIF3A-204ENST00000300862 KRT28Q7Z3Y7 464 aa15.6■□□□□ 0.09
HIF3A-204ENST00000300862 DDX54Q8TDD1 881 aaKnown RBP15.6■□□□□ 0.09
HIF3A-204ENST00000300862 HSP90AB4PQ58FF6 505 aa15.59■□□□□ 0.09
HIF3A-204ENST00000300862 KIAA1211Q6ZU35 1233 aa15.59■□□□□ 0.09
HIF3A-204ENST00000300862 DDX17Q92841 729 aaKnown RBP15.59■□□□□ 0.09
HIF3A-204ENST00000300862 INTS4Q96HW7 963 aaKnown RBP15.59■□□□□ 0.09
HIF3A-204ENST00000300862 SUCLG2Q96I99 432 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms