RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 ZNF219Q9P2Y4 722 aaPredicted RBP11.08□□□□□ -0.64
MMP3-201ENST00000299855 MAP3K20Q9NYL2 800 aaKnown RBP11.07□□□□□ -0.64
MMP3-201ENST00000299855 PDZRN3Q9UPQ7 1066 aa11.07□□□□□ -0.64
MMP3-201ENST00000299855 IQGAP3Q86VI3 1631 aa11.07□□□□□ -0.64
MMP3-201ENST00000299855 CEP170BQ9Y4F5 1589 aaPredicted RBP11.07□□□□□ -0.64
MMP3-201ENST00000299855 NCOA3Q9Y6Q9 1424 aa11.06□□□□□ -0.64
MMP3-201ENST00000299855 SSR1P43307 286 aaKnown RBP11.06□□□□□ -0.64
MMP3-201ENST00000299855 RGL3Q3MIN7 710 aa11.06□□□□□ -0.64
MMP3-201ENST00000299855 SNX21Q969T3 373 aa11.06□□□□□ -0.64
MMP3-201ENST00000299855 C22orf23Q9BZE7 217 aa11.06□□□□□ -0.64
MMP3-201ENST00000299855 INO80BQ9C086 356 aaPredicted RBP11.06□□□□□ -0.64
MMP3-201ENST00000299855 QTRT2Q9H974 415 aaKnown RBP11.06□□□□□ -0.64
MMP3-201ENST00000299855 VDRP11473 427 aa11.06□□□□□ -0.64
MMP3-201ENST00000299855 DDIT3P35638 169 aa11.06□□□□□ -0.64
MMP3-201ENST00000299855 EVA1CP58658 441 aa11.06□□□□□ -0.64
MMP3-201ENST00000299855 NPAS4Q8IUM7 802 aa11.06□□□□□ -0.64
MMP3-201ENST00000299855 PARP9Q8IXQ6 854 aa11.06□□□□□ -0.64
MMP3-201ENST00000299855 C1orf131Q8NDD1 294 aaKnown RBP11.06□□□□□ -0.64
MMP3-201ENST00000299855 MAP7D2Q96T17 732 aa11.06□□□□□ -0.64
MMP3-201ENST00000299855 IRF6O14896 467 aa11.05□□□□□ -0.64
MMP3-201ENST00000299855 FAM200BP0CF97 657 aa11.05□□□□□ -0.64
MMP3-201ENST00000299855 PAGR1Q9BTK6 254 aa11.05□□□□□ -0.64
MMP3-201ENST00000299855 TBX22Q9Y458 520 aa11.05□□□□□ -0.64
MMP3-201ENST00000299855 A2ML1A8K2U0 1454 aa11.05□□□□□ -0.64
MMP3-201ENST00000299855 KANK1Q14678 1352 aa11.05□□□□□ -0.64
MMP3-201ENST00000299855 TNRQ92752 1358 aa11.05□□□□□ -0.64
MMP3-201ENST00000299855 NCKAP5LQ9HCH0 1330 aa11.05□□□□□ -0.64
MMP3-201ENST00000299855 RARSP54136 660 aaKnown RBP11.04□□□□□ -0.64
MMP3-201ENST00000299855 NBPF10Q6P3W6 841 aaKnown RBP11.04□□□□□ -0.64
MMP3-201ENST00000299855 WDR63Q8IWG1 891 aa11.04□□□□□ -0.64
MMP3-201ENST00000299855 PDILTQ8N807 584 aa11.04□□□□□ -0.64
MMP3-201ENST00000299855 PPP1R9BQ96SB3 815 aa11.04□□□□□ -0.64
MMP3-201ENST00000299855 TRIM34Q9BYJ4 488 aa11.04□□□□□ -0.64
MMP3-201ENST00000299855 RSPH9Q9H1X1 276 aaPredicted RBP11.04□□□□□ -0.64
MMP3-201ENST00000299855 PRR12Q9ULL5 1215 aa11.04□□□□□ -0.64
MMP3-201ENST00000299855 POLR3AO14802 1390 aaPredicted RBP11.04□□□□□ -0.64
MMP3-201ENST00000299855 CCDC173Q0VFZ6 552 aa11.04□□□□□ -0.64
MMP3-201ENST00000299855 ZRSR2Q15696 482 aaKnown RBP11.04□□□□□ -0.64
MMP3-201ENST00000299855 PLEKHG6Q3KR16 790 aa11.04□□□□□ -0.64
MMP3-201ENST00000299855 HSCBQ8IWL3 235 aa11.04□□□□□ -0.64
MMP3-201ENST00000299855 PANK1Q8TE04 598 aa11.04□□□□□ -0.64
MMP3-201ENST00000299855 GBP4Q96PP9 640 aa11.04□□□□□ -0.64
MMP3-201ENST00000299855 PCDHB15Q9Y5E8 787 aa11.04□□□□□ -0.64
MMP3-201ENST00000299855 MROH1Q8NDA8 1641 aa11.04□□□□□ -0.64
MMP3-201ENST00000299855 DUOX2Q9NRD8 1548 aa11.03□□□□□ -0.64
MMP3-201ENST00000299855 SCAF11Q99590 1463 aaKnown RBP11.03□□□□□ -0.64
MMP3-201ENST00000299855 NOM1Q5C9Z4 860 aaKnown RBP11.03□□□□□ -0.64
MMP3-201ENST00000299855 FBXO31Q5XUX0 539 aaPredicted RBP11.03□□□□□ -0.64
MMP3-201ENST00000299855 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.03□□□□□ -0.64
MMP3-201ENST00000299855 GLMNQ92990 594 aa11.03□□□□□ -0.64
MMP3-201ENST00000299855 SYNPO2Q9UMS6 1093 aa11.03□□□□□ -0.64
MMP3-201ENST00000299855 SCINQ9Y6U3 715 aa11.03□□□□□ -0.64
MMP3-201ENST00000299855 IBTKQ9P2D0 1353 aaPredicted RBP11.03□□□□□ -0.64
MMP3-201ENST00000299855 CCDC144BQ3MJ40 725 aa11.02□□□□□ -0.64
MMP3-201ENST00000299855 HS1BP3Q53T59 392 aa11.02□□□□□ -0.64
MMP3-201ENST00000299855 NLGN1Q8N2Q7 840 aa11.02□□□□□ -0.64
MMP3-201ENST00000299855 G3BP2Q9UN86 482 aaKnown RBP11.02□□□□□ -0.64
MMP3-201ENST00000299855 MYOM1P52179 1685 aa11.02□□□□□ -0.64
MMP3-201ENST00000299855 RECKO95980 971 aa11.02□□□□□ -0.65
MMP3-201ENST00000299855 CT47B1P0C2W7 299 aaPredicted RBP11.02□□□□□ -0.65
MMP3-201ENST00000299855 ERCC5P28715 1186 aaPredicted RBP11.02□□□□□ -0.65
MMP3-201ENST00000299855 CEP63Q96MT8 703 aa11.02□□□□□ -0.65
MMP3-201ENST00000299855 TANGO6Q9C0B7 1094 aa11.02□□□□□ -0.65
MMP3-201ENST00000299855 SPC25Q9HBM1 224 aa11.02□□□□□ -0.65
MMP3-201ENST00000299855 STAG3Q9UJ98 1225 aa11.02□□□□□ -0.65
MMP3-201ENST00000299855 ZC3H13Q5T200 1668 aaKnown RBP11.02□□□□□ -0.65
MMP3-201ENST00000299855 ABCC3O15438 1527 aa11.02□□□□□ -0.65
MMP3-201ENST00000299855 ERBB4Q15303 1308 aa11.01□□□□□ -0.65
MMP3-201ENST00000299855 BICDL2A1A5D9 508 aa11.01□□□□□ -0.65
MMP3-201ENST00000299855 OFD1O75665 1012 aa11.01□□□□□ -0.65
MMP3-201ENST00000299855 RFX1P22670 979 aa11.01□□□□□ -0.65
MMP3-201ENST00000299855 SF3B2Q13435 895 aaKnown RBP11.01□□□□□ -0.65
MMP3-201ENST00000299855 CLEC17AQ6ZS10 378 aa11.01□□□□□ -0.65
MMP3-201ENST00000299855 ABCF2Q9UG63 623 aa11.01□□□□□ -0.65
MMP3-201ENST00000299855 LTBP4Q8N2S1 1624 aa11.01□□□□□ -0.65
MMP3-201ENST00000299855 CBFA2T2O43439 604 aa11.01□□□□□ -0.65
MMP3-201ENST00000299855 ZSCAN30Q86W11 494 aa11.01□□□□□ -0.65
MMP3-201ENST00000299855 MPNDQ8N594 471 aa11.01□□□□□ -0.65
MMP3-201ENST00000299855 ZNF513Q8N8E2 541 aaPredicted RBP11.01□□□□□ -0.65
MMP3-201ENST00000299855 NAP1L4Q99733 375 aaKnown RBP11.01□□□□□ -0.65
MMP3-201ENST00000299855 CTDP1Q9Y5B0 961 aaPredicted RBP11.01□□□□□ -0.65
MMP3-201ENST00000299855 KDM5AP29375 1690 aaKnown RBP11□□□□□ -0.65
MMP3-201ENST00000299855 KIAA1210Q9ULL0 1709 aa11□□□□□ -0.65
MMP3-201ENST00000299855 SPDYE2BA6NHP3 402 aa11□□□□□ -0.65
MMP3-201ENST00000299855 SPDYE5A6NIY4 337 aa11□□□□□ -0.65
MMP3-201ENST00000299855 SPDYE6P0CI01 402 aa11□□□□□ -0.65
MMP3-201ENST00000299855 RAB3GAP1Q15042 981 aa11□□□□□ -0.65
MMP3-201ENST00000299855 SPDYE2Q495Y8 402 aa11□□□□□ -0.65
MMP3-201ENST00000299855 TBC1D10BQ4KMP7 808 aaPredicted RBP11□□□□□ -0.65
MMP3-201ENST00000299855 PDZRN4Q6ZMN7 1036 aaPredicted RBP11□□□□□ -0.65
MMP3-201ENST00000299855 MTERF4Q7Z6M4 381 aaKnown RBP11□□□□□ -0.65
MMP3-201ENST00000299855 IQSEC2Q5JU85 1478 aa10.99□□□□□ -0.65
MMP3-201ENST00000299855 NEXNQ0ZGT2 675 aa10.99□□□□□ -0.65
MMP3-201ENST00000299855 TCEAL1Q15170 157 aa10.99□□□□□ -0.65
MMP3-201ENST00000299855 HDLBPQ00341 1268 aaKnown RBP10.99□□□□□ -0.65
MMP3-201ENST00000299855 MVPQ14764 893 aaKnown RBP10.99□□□□□ -0.65
MMP3-201ENST00000299855 KIAA1211Q6ZU35 1233 aa10.99□□□□□ -0.65
MMP3-201ENST00000299855 RPAINQ86UA6 219 aa10.99□□□□□ -0.65
MMP3-201ENST00000299855 RUNDC1Q96C34 613 aa10.99□□□□□ -0.65
MMP3-201ENST00000299855 COL4A3BPQ9Y5P4 624 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms