RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 ZBTB7BO15156 539 aaPredicted RBP23.43■■□□□ 1.34
SEC61A2-201ENST00000298428 SYTL4Q96C24 671 aaPredicted RBP23.43■■□□□ 1.34
SEC61A2-201ENST00000298428 PCDHB15Q9Y5E8 787 aa23.43■■□□□ 1.34
SEC61A2-201ENST00000298428 LAMB4A4D0S4 1761 aa23.42■■□□□ 1.34
SEC61A2-201ENST00000298428 A0A0G2JS52 829 aa23.42■■□□□ 1.34
SEC61A2-201ENST00000298428 MYT1Q01538 1121 aa23.42■■□□□ 1.34
SEC61A2-201ENST00000298428 PROSER3Q2NL68 480 aa23.42■■□□□ 1.34
SEC61A2-201ENST00000298428 SLC4A10Q6U841 1118 aa23.42■■□□□ 1.34
SEC61A2-201ENST00000298428 CENPQQ7L2Z9 268 aaPredicted RBP23.42■■□□□ 1.34
SEC61A2-201ENST00000298428 GJD4Q96KN9 370 aaPredicted RBP23.42■■□□□ 1.34
SEC61A2-201ENST00000298428 DDX21Q9NR30 783 aaKnown RBP eCLIP23.42■■□□□ 1.34
SEC61A2-201ENST00000298428 USP16Q9Y5T5 823 aa23.42■■□□□ 1.34
SEC61A2-201ENST00000298428 PTCD1O75127 700 aaKnown RBP23.41■■□□□ 1.34
SEC61A2-201ENST00000298428 HYPKQ9NX55 129 aa23.41■■□□□ 1.34
SEC61A2-201ENST00000298428 TRPC5Q9UL62 973 aaPredicted RBP23.41■■□□□ 1.34
SEC61A2-201ENST00000298428 ATRNO75882 1429 aa23.41■■□□□ 1.34
SEC61A2-201ENST00000298428 CCT4P50991 539 aaKnown RBP23.41■■□□□ 1.34
SEC61A2-201ENST00000298428 ASAP1Q9ULH1 1129 aa23.41■■□□□ 1.34
SEC61A2-201ENST00000298428 THSD7AQ9UPZ6 1657 aa23.4■■□□□ 1.34
SEC61A2-201ENST00000298428 PRIM1P49642 420 aaKnown RBP23.4■■□□□ 1.34
SEC61A2-201ENST00000298428 PDIA6Q15084 440 aa23.4■■□□□ 1.34
SEC61A2-201ENST00000298428 ATG3Q9NT62 314 aa23.4■■□□□ 1.34
SEC61A2-201ENST00000298428 KAT6BQ8WYB5 2073 aa23.39■■□□□ 1.33
SEC61A2-201ENST00000298428 PXDNLA1KZ92 1463 aa23.39■■□□□ 1.33
SEC61A2-201ENST00000298428 IGHDP01880 384 aa23.37■■□□□ 1.33
SEC61A2-201ENST00000298428 ACSBG1Q96GR2 724 aa23.36■■□□□ 1.33
SEC61A2-201ENST00000298428 MYL6BP14649 208 aa23.36■■□□□ 1.33
SEC61A2-201ENST00000298428 N4BP2Q86UW6 1770 aaPredicted RBP23.35■■□□□ 1.33
SEC61A2-201ENST00000298428 PI4KAP2A4QPH2 592 aa23.35■■□□□ 1.33
SEC61A2-201ENST00000298428 PI4KAP1Q8N8J0 262 aa23.35■■□□□ 1.33
SEC61A2-201ENST00000298428 ERBB4Q15303 1308 aa23.35■■□□□ 1.33
SEC61A2-201ENST00000298428 VSIG10Q8N0Z9 540 aa23.34■■□□□ 1.33
SEC61A2-201ENST00000298428 RWDD1Q9H446 243 aaPredicted RBP23.34■■□□□ 1.33
SEC61A2-201ENST00000298428 ADCY9O60503 1353 aa23.34■■□□□ 1.33
SEC61A2-201ENST00000298428 DNAAF4Q8WXU2 420 aa23.34■■□□□ 1.33
SEC61A2-201ENST00000298428 RBM42Q9BTD8 480 aaKnown RBP23.34■■□□□ 1.33
SEC61A2-201ENST00000298428 C1orf115Q9H7X2 142 aa23.33■■□□□ 1.33
SEC61A2-201ENST00000298428 QTRT2Q9H974 415 aaKnown RBP23.33■■□□□ 1.33
SEC61A2-201ENST00000298428 DDX58O95786 925 aaKnown RBP23.32■■□□□ 1.32
SEC61A2-201ENST00000298428 PIP4K2AP48426 406 aaPredicted RBP23.32■■□□□ 1.32
SEC61A2-201ENST00000298428 AIMP1Q12904 312 aaKnown RBP23.32■■□□□ 1.32
SEC61A2-201ENST00000298428 KSR2Q6VAB6 950 aa23.32■■□□□ 1.32
SEC61A2-201ENST00000298428 LRP10Q7Z4F1 713 aa23.32■■□□□ 1.32
SEC61A2-201ENST00000298428 MEIS3Q99687 375 aa23.32■■□□□ 1.32
SEC61A2-201ENST00000298428 TEX13AQ9BXU3 409 aaPredicted RBP23.32■■□□□ 1.32
SEC61A2-201ENST00000298428 ONECUT3O60422 494 aaPredicted RBP23.31■■□□□ 1.32
SEC61A2-201ENST00000298428 HDAC1Q13547 482 aaPredicted RBP23.31■■□□□ 1.32
SEC61A2-201ENST00000298428 XAGE3Q8WTP9 111 aa23.3■■□□□ 1.32
SEC61A2-201ENST00000298428 SRCIN1Q9C0H9 1055 aa23.3■■□□□ 1.32
SEC61A2-201ENST00000298428 MAP3K2Q9Y2U5 619 aa23.3■■□□□ 1.32
SEC61A2-201ENST00000298428 COPS6Q7L5N1 327 aa23.3■■□□□ 1.32
SEC61A2-201ENST00000298428 ATP10DQ9P241 1426 aa23.29■■□□□ 1.32
SEC61A2-201ENST00000298428 DNAJC10Q8IXB1 793 aa23.29■■□□□ 1.32
SEC61A2-201ENST00000298428 NBPF26B4DH59 902 aa23.28■■□□□ 1.32
SEC61A2-201ENST00000298428 A1BGP04217 495 aa23.28■■□□□ 1.32
SEC61A2-201ENST00000298428 BEND3Q5T5X7 828 aa23.28■■□□□ 1.32
SEC61A2-201ENST00000298428 NBPF14Q5TI25 921 aa23.28■■□□□ 1.32
SEC61A2-201ENST00000298428 NBPF10Q6P3W6 841 aaKnown RBP23.28■■□□□ 1.32
SEC61A2-201ENST00000298428 NBPF15Q8N660 670 aa23.28■■□□□ 1.32
SEC61A2-201ENST00000298428 KCNQ2O43526 872 aa23.28■■□□□ 1.32
SEC61A2-201ENST00000298428 SEPT12Q8IYM1 358 aa23.28■■□□□ 1.32
SEC61A2-201ENST00000298428 STARD3NLO95772 234 aa23.27■■□□□ 1.32
SEC61A2-201ENST00000298428 SLC4A9Q96Q91 983 aa23.27■■□□□ 1.32
SEC61A2-201ENST00000298428 RIC3Q7Z5B4 369 aa23.26■■□□□ 1.31
SEC61A2-201ENST00000298428 GNAI3P08754 354 aa23.26■■□□□ 1.31
SEC61A2-201ENST00000298428 ANKRD13DQ6ZTN6 518 aa23.24■■□□□ 1.31
SEC61A2-201ENST00000298428 TJP1Q07157 1748 aa23.24■■□□□ 1.31
SEC61A2-201ENST00000298428 ZNF772Q68DY9 489 aaPredicted RBP23.24■■□□□ 1.31
SEC61A2-201ENST00000298428 PALLDQ8WX93 1383 aa23.24■■□□□ 1.31
SEC61A2-201ENST00000298428 SMARCC1Q92922 1105 aaPredicted RBP23.24■■□□□ 1.31
SEC61A2-201ENST00000298428 USP44Q9H0E7 712 aa23.24■■□□□ 1.31
SEC61A2-201ENST00000298428 GNAI2P04899 355 aa23.23■■□□□ 1.31
SEC61A2-201ENST00000298428 FAM182BQ5T319 152 aa23.23■■□□□ 1.31
SEC61A2-201ENST00000298428 ALDH1L1O75891 902 aa23.22■■□□□ 1.31
SEC61A2-201ENST00000298428 SIRT2Q8IXJ6 389 aa23.22■■□□□ 1.31
SEC61A2-201ENST00000298428 CYP19A1P11511 503 aaPredicted RBP23.22■■□□□ 1.31
SEC61A2-201ENST00000298428 CEP85Q6P2H3 762 aa23.22■■□□□ 1.31
SEC61A2-201ENST00000298428 SKAP1Q86WV1 359 aa23.22■■□□□ 1.31
SEC61A2-201ENST00000298428 RPAP2Q8IXW5 612 aaPredicted RBP23.22■■□□□ 1.31
SEC61A2-201ENST00000298428 LINS1Q8NG48 757 aa23.22■■□□□ 1.31
SEC61A2-201ENST00000298428 NHSQ6T4R5 1651 aa23.21■■□□□ 1.31
SEC61A2-201ENST00000298428 LOC102724428A0A0B4J2F2 783 aa23.21■■□□□ 1.31
SEC61A2-201ENST00000298428 UBTFL1P0CB47 393 aaPredicted RBP23.21■■□□□ 1.31
SEC61A2-201ENST00000298428 SIK1P57059 783 aa23.21■■□□□ 1.31
SEC61A2-201ENST00000298428 NEXNQ0ZGT2 675 aa23.21■■□□□ 1.31
SEC61A2-201ENST00000298428 ANKRD44Q8N8A2 993 aa23.21■■□□□ 1.31
SEC61A2-201ENST00000298428 PLBD2Q8NHP8 589 aa23.21■■□□□ 1.31
SEC61A2-201ENST00000298428 FBXO41Q8TF61 875 aa23.21■■□□□ 1.31
SEC61A2-201ENST00000298428 METTL22Q9BUU2 404 aaPredicted RBP23.21■■□□□ 1.31
SEC61A2-201ENST00000298428 ARFGEF2Q9Y6D5 1785 aa23.2■■□□□ 1.3
SEC61A2-201ENST00000298428 ATP6V1AP38606 617 aa23.19■■□□□ 1.3
SEC61A2-201ENST00000298428 CWF19L2Q2TBE0 894 aaKnown RBP23.19■■□□□ 1.3
SEC61A2-201ENST00000298428 SMC5Q8IY18 1101 aa23.19■■□□□ 1.3
SEC61A2-201ENST00000298428 TTLL7Q6ZT98 887 aa23.19■■□□□ 1.3
SEC61A2-201ENST00000298428 MYD88Q99836 296 aa23.18■■□□□ 1.3
SEC61A2-201ENST00000298428 ZNF330Q9Y3S2 320 aaPredicted RBP23.18■■□□□ 1.3
SEC61A2-201ENST00000298428 CICQ96RK0 1608 aaPredicted RBP23.18■■□□□ 1.3
SEC61A2-201ENST00000298428 PTF1AQ7RTS3 328 aa23.17■■□□□ 1.3
SEC61A2-201ENST00000298428 LRRFIP2Q9Y608 721 aaKnown RBP23.17■■□□□ 1.3
SEC61A2-201ENST00000298428 IGKV5-2P06315 115 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms