RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 KIF2CQ99661 725 aa8.19□□□□□ -1.1
DEFB1-201ENST00000297439 TSPYL4Q9UJ04 414 aa8.19□□□□□ -1.1
DEFB1-201ENST00000297439 ADAMTS7Q9UKP4 1686 aa8.18□□□□□ -1.1
DEFB1-201ENST00000297439 DDX11L8A8MPP1 907 aa8.18□□□□□ -1.1
DEFB1-201ENST00000297439 ELL2O00472 640 aaPredicted RBP8.18□□□□□ -1.1
DEFB1-201ENST00000297439 GNAI3P08754 354 aa8.18□□□□□ -1.1
DEFB1-201ENST00000297439 GSPT1P15170 499 aaKnown RBP8.18□□□□□ -1.1
DEFB1-201ENST00000297439 MCM4P33991 863 aa8.18□□□□□ -1.1
DEFB1-201ENST00000297439 ANKLE2Q86XL3 938 aa8.18□□□□□ -1.1
DEFB1-201ENST00000297439 IP6K1Q92551 441 aa8.18□□□□□ -1.1
DEFB1-201ENST00000297439 IL17RAQ96F46 866 aa8.18□□□□□ -1.1
DEFB1-201ENST00000297439 STK31Q9BXU1 1019 aa8.18□□□□□ -1.1
DEFB1-201ENST00000297439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.18□□□□□ -1.1
DEFB1-201ENST00000297439 AOX1Q06278 1338 aa8.18□□□□□ -1.1
DEFB1-201ENST00000297439 KIF1AQ12756 1690 aa8.18□□□□□ -1.1
DEFB1-201ENST00000297439 LTN1O94822 1766 aa8.17□□□□□ -1.1
DEFB1-201ENST00000297439 KDM3BQ7LBC6 1761 aa8.17□□□□□ -1.1
DEFB1-201ENST00000297439 RABEP1Q15276 862 aa8.17□□□□□ -1.1
DEFB1-201ENST00000297439 TAF7Q15545 349 aaPredicted RBP8.17□□□□□ -1.1
DEFB1-201ENST00000297439 C1orf115Q9H7X2 142 aa8.17□□□□□ -1.1
DEFB1-201ENST00000297439 PHF8Q9UPP1 1060 aa8.17□□□□□ -1.1
DEFB1-201ENST00000297439 SALL3Q9BXA9 1300 aa8.17□□□□□ -1.1
DEFB1-201ENST00000297439 K7ELQ4 463 aaPredicted RBP8.16□□□□□ -1.1
DEFB1-201ENST00000297439 GNAI2P04899 355 aa8.16□□□□□ -1.1
DEFB1-201ENST00000297439 PDAP1Q13442 181 aaKnown RBP8.16□□□□□ -1.1
DEFB1-201ENST00000297439 KRT24Q2M2I5 525 aa8.16□□□□□ -1.1
DEFB1-201ENST00000297439 L1TD1Q5T7N2 865 aaKnown RBP8.16□□□□□ -1.1
DEFB1-201ENST00000297439 CASC1Q6TDU7 716 aa8.16□□□□□ -1.1
DEFB1-201ENST00000297439 MARVELD3Q96A59 401 aa8.16□□□□□ -1.1
DEFB1-201ENST00000297439 TUBGCP6Q96RT7 1819 aa8.16□□□□□ -1.1
DEFB1-201ENST00000297439 MEIS3Q99687 375 aa8.16□□□□□ -1.1
DEFB1-201ENST00000297439 SLKQ9H2G2 1235 aaPredicted RBP8.16□□□□□ -1.1
DEFB1-201ENST00000297439 SETD1BQ9UPS6 1966 aaKnown RBP8.16□□□□□ -1.1
DEFB1-201ENST00000297439 TRPM3Q9HCF6 1732 aaPredicted RBP8.15□□□□□ -1.1
DEFB1-201ENST00000297439 NPHP4O75161 1426 aaPredicted RBP8.15□□□□□ -1.1
DEFB1-201ENST00000297439 REC8O95072 547 aa8.15□□□□□ -1.1
DEFB1-201ENST00000297439 FLIIQ13045 1269 aa8.15□□□□□ -1.1
DEFB1-201ENST00000297439 RAB3GAP1Q15042 981 aa8.15□□□□□ -1.1
DEFB1-201ENST00000297439 ABTB2Q8N961 1025 aa8.15□□□□□ -1.1
DEFB1-201ENST00000297439 IL17REQ8NFR9 667 aa8.15□□□□□ -1.1
DEFB1-201ENST00000297439 SRCIN1Q9C0H9 1055 aa8.15□□□□□ -1.1
DEFB1-201ENST00000297439 STAP2Q9UGK3 403 aa8.15□□□□□ -1.1
DEFB1-201ENST00000297439 TAOK2Q9UL54 1235 aa8.15□□□□□ -1.1
DEFB1-201ENST00000297439 DCCP43146 1447 aa8.14□□□□□ -1.11
DEFB1-201ENST00000297439 HEG1Q9ULI3 1381 aa8.14□□□□□ -1.11
DEFB1-201ENST00000297439 NUTM2FA1L443 756 aa8.14□□□□□ -1.11
DEFB1-201ENST00000297439 FSD2A1L4K1 749 aa8.14□□□□□ -1.11
DEFB1-201ENST00000297439 FOXO3O43524 673 aa8.14□□□□□ -1.11
DEFB1-201ENST00000297439 ATP8B2P98198 1209 aa8.14□□□□□ -1.11
DEFB1-201ENST00000297439 AMOTQ4VCS5 1084 aa8.14□□□□□ -1.11
DEFB1-201ENST00000297439 ILDR1Q86SU0 546 aaPredicted RBP8.14□□□□□ -1.11
DEFB1-201ENST00000297439 SPOCK2Q92563 424 aa8.14□□□□□ -1.11
DEFB1-201ENST00000297439 USP26Q9BXU7 913 aa8.14□□□□□ -1.11
DEFB1-201ENST00000297439 PRKCSHP14314 528 aaPredicted RBP8.13□□□□□ -1.11
DEFB1-201ENST00000297439 SDSP20132 328 aa8.13□□□□□ -1.11
DEFB1-201ENST00000297439 SKOR2Q2VWA4 1001 aaPredicted RBP8.13□□□□□ -1.11
DEFB1-201ENST00000297439 G2E3Q7L622 706 aa8.13□□□□□ -1.11
DEFB1-201ENST00000297439 SPNS2Q8IVW8 549 aa8.13□□□□□ -1.11
DEFB1-201ENST00000297439 GBP4Q96PP9 640 aa8.13□□□□□ -1.11
DEFB1-201ENST00000297439 RAB11FIP3O75154 756 aa8.12□□□□□ -1.11
DEFB1-201ENST00000297439 HSP90AB1P08238 724 aaKnown RBP8.12□□□□□ -1.11
DEFB1-201ENST00000297439 PDE1AP54750 535 aa8.12□□□□□ -1.11
DEFB1-201ENST00000297439 ANAPC15P60006 121 aa8.12□□□□□ -1.11
DEFB1-201ENST00000297439 AKAP4Q5JQC9 854 aa8.12□□□□□ -1.11
DEFB1-201ENST00000297439 ARHGEF25Q86VW2 580 aa8.12□□□□□ -1.11
DEFB1-201ENST00000297439 SSH3Q8TE77 659 aa8.12□□□□□ -1.11
DEFB1-201ENST00000297439 CWC22Q9HCG8 908 aaKnown RBP8.12□□□□□ -1.11
DEFB1-201ENST00000297439 HDAC5Q9UQL6 1122 aa8.12□□□□□ -1.11
DEFB1-201ENST00000297439 CRYBG1Q9Y4K1 1723 aa8.12□□□□□ -1.11
DEFB1-201ENST00000297439 ALS2Q96Q42 1657 aa8.11□□□□□ -1.11
DEFB1-201ENST00000297439 USP42Q9H9J4 1324 aaKnown RBP8.11□□□□□ -1.11
DEFB1-201ENST00000297439 ERC2O15083 957 aa8.11□□□□□ -1.11
DEFB1-201ENST00000297439 MCM2P49736 904 aa8.11□□□□□ -1.11
DEFB1-201ENST00000297439 EMP3P54852 163 aa8.11□□□□□ -1.11
DEFB1-201ENST00000297439 EIF4A1P60842 406 aaKnown RBP8.11□□□□□ -1.11
DEFB1-201ENST00000297439 MMRN1Q13201 1228 aa8.11□□□□□ -1.11
DEFB1-201ENST00000297439 FKBP5Q13451 457 aaPredicted RBP8.11□□□□□ -1.11
DEFB1-201ENST00000297439 MTX1Q13505 466 aa8.11□□□□□ -1.11
DEFB1-201ENST00000297439 PLEKHO1Q53GL0 409 aaPredicted RBP8.11□□□□□ -1.11
DEFB1-201ENST00000297439 IFNLR1Q8IU57 520 aaPredicted RBP8.11□□□□□ -1.11
DEFB1-201ENST00000297439 LRRCC1Q9C099 1032 aa8.11□□□□□ -1.11
DEFB1-201ENST00000297439 SIPA1L3O60292 1781 aaPredicted RBP8.11□□□□□ -1.11
DEFB1-201ENST00000297439 CYP2E1P05181 493 aaPredicted RBP8.1□□□□□ -1.11
DEFB1-201ENST00000297439 NUCB2P80303 420 aa8.1□□□□□ -1.11
DEFB1-201ENST00000297439 HDGFL1Q5TGJ6 251 aa8.1□□□□□ -1.11
DEFB1-201ENST00000297439 USP44Q9H0E7 712 aa8.1□□□□□ -1.11
DEFB1-201ENST00000297439 MRC1P22897 1456 aa8.1□□□□□ -1.11
DEFB1-201ENST00000297439 C1orf167Q5SNV9 1468 aa8.1□□□□□ -1.11
DEFB1-201ENST00000297439 F6X3S4 739 aa8.09□□□□□ -1.11
DEFB1-201ENST00000297439 TRAK2O60296 914 aa8.09□□□□□ -1.11
DEFB1-201ENST00000297439 ALDH1L1O75891 902 aa8.09□□□□□ -1.11
DEFB1-201ENST00000297439 UBTFL1P0CB47 393 aaPredicted RBP8.09□□□□□ -1.11
DEFB1-201ENST00000297439 MX1P20591 662 aa8.09□□□□□ -1.11
DEFB1-201ENST00000297439 HSP90AB4PQ58FF6 505 aa8.09□□□□□ -1.11
DEFB1-201ENST00000297439 NBPF6Q5VWK0 638 aa8.09□□□□□ -1.11
DEFB1-201ENST00000297439 TNPO1Q92973 898 aaKnown RBP8.09□□□□□ -1.11
DEFB1-201ENST00000297439 NBPF4Q96M43 638 aa8.09□□□□□ -1.11
DEFB1-201ENST00000297439 MIS18AQ9NYP9 233 aa8.09□□□□□ -1.11
DEFB1-201ENST00000297439 SOX12O15370 315 aa8.08□□□□□ -1.12
DEFB1-201ENST00000297439 CD2BP2O95400 341 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms