RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 RTF1Q92541 710 aaKnown RBP17.82■□□□□ 0.44
SPIDR-201ENST00000297423 TNNT3P45378 269 aaPredicted RBP17.82■□□□□ 0.44
SPIDR-201ENST00000297423 NAA30Q147X3 362 aaPredicted RBP17.81■□□□□ 0.44
SPIDR-201ENST00000297423 LTV1Q96GA3 475 aaPredicted RBP17.81■□□□□ 0.44
SPIDR-201ENST00000297423 GTPBP4Q9BZE4 634 aaKnown RBP17.81■□□□□ 0.44
SPIDR-201ENST00000297423 ZNF710Q8N1W2 664 aa17.81■□□□□ 0.44
SPIDR-201ENST00000297423 MIS18AQ9NYP9 233 aa17.81■□□□□ 0.44
SPIDR-201ENST00000297423 AATKQ6ZMQ8 1374 aa17.81■□□□□ 0.44
SPIDR-201ENST00000297423 LETM1O95202 739 aaPredicted RBP17.81■□□□□ 0.44
SPIDR-201ENST00000297423 LMOD3Q0VAK6 560 aa17.81■□□□□ 0.44
SPIDR-201ENST00000297423 SULT6B1Q6IMI4 303 aa17.81■□□□□ 0.44
SPIDR-201ENST00000297423 HMMRO75330 724 aa17.81■□□□□ 0.44
SPIDR-201ENST00000297423 FOSBP53539 338 aa17.81■□□□□ 0.44
SPIDR-201ENST00000297423 IL1RAPL2Q9NP60 686 aa17.81■□□□□ 0.44
SPIDR-201ENST00000297423 PYCARDQ9ULZ3 195 aa17.81■□□□□ 0.44
SPIDR-201ENST00000297423 PTGS1P23219 599 aa17.8■□□□□ 0.44
SPIDR-201ENST00000297423 C8orf58Q8NAV2 365 aa17.8■□□□□ 0.44
SPIDR-201ENST00000297423 F6X3S4 739 aa17.8■□□□□ 0.44
SPIDR-201ENST00000297423 GNAI1P63096 354 aa17.8■□□□□ 0.44
SPIDR-201ENST00000297423 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.8■□□□□ 0.44
SPIDR-201ENST00000297423 FOXO3O43524 673 aa17.8■□□□□ 0.44
SPIDR-201ENST00000297423 OS9Q13438 667 aaPredicted RBP17.8■□□□□ 0.44
SPIDR-201ENST00000297423 AEBP1Q8IUX7 1158 aa17.8■□□□□ 0.44
SPIDR-201ENST00000297423 CCDC112Q8NEF3 446 aa17.8■□□□□ 0.44
SPIDR-201ENST00000297423 ZNF428Q96B54 188 aa17.8■□□□□ 0.44
SPIDR-201ENST00000297423 IL13P35225 146 aa17.79■□□□□ 0.44
SPIDR-201ENST00000297423 PHACTR3Q96KR7 559 aa17.79■□□□□ 0.44
SPIDR-201ENST00000297423 TNNT1P13805 278 aa17.79■□□□□ 0.44
SPIDR-201ENST00000297423 HSP90AB2PQ58FF8 381 aa17.79■□□□□ 0.44
SPIDR-201ENST00000297423 CCDC183Q5T5S1 534 aa17.79■□□□□ 0.44
SPIDR-201ENST00000297423 NAP1L2Q9ULW6 460 aaPredicted RBP17.79■□□□□ 0.44
SPIDR-201ENST00000297423 ANKARQ7Z5J8 1434 aa17.78■□□□□ 0.44
SPIDR-201ENST00000297423 GORABQ5T7V8 394 aa17.78■□□□□ 0.44
SPIDR-201ENST00000297423 TRMT1Q9NXH9 659 aaKnown RBP17.78■□□□□ 0.44
SPIDR-201ENST00000297423 WDR33Q9C0J8 1336 aaKnown RBP17.78■□□□□ 0.44
SPIDR-201ENST00000297423 NFE2L2Q16236 605 aa17.78■□□□□ 0.44
SPIDR-201ENST00000297423 VAMP4O75379 141 aa17.78■□□□□ 0.44
SPIDR-201ENST00000297423 MRPL50Q8N5N7 158 aaKnown RBP17.78■□□□□ 0.44
SPIDR-201ENST00000297423 MEIS3Q99687 375 aa17.78■□□□□ 0.44
SPIDR-201ENST00000297423 ALDH1L2Q3SY69 923 aa17.77■□□□□ 0.44
SPIDR-201ENST00000297423 CCDC186Q7Z3E2 898 aa17.77■□□□□ 0.44
SPIDR-201ENST00000297423 MBIPQ9NS73 344 aa17.77■□□□□ 0.44
SPIDR-201ENST00000297423 PNPLA6Q8IY17 1366 aa17.77■□□□□ 0.44
SPIDR-201ENST00000297423 PALD1Q9ULE6 856 aa17.77■□□□□ 0.44
SPIDR-201ENST00000297423 PLEKHF1Q96S99 279 aa17.77■□□□□ 0.43
SPIDR-201ENST00000297423 C19orf44Q9H6X5 657 aa17.77■□□□□ 0.43
SPIDR-201ENST00000297423 KIF20BQ96Q89 1820 aa17.76■□□□□ 0.43
SPIDR-201ENST00000297423 CPA1P15085 419 aa17.76■□□□□ 0.43
SPIDR-201ENST00000297423 EIF4A2Q14240 407 aaKnown RBP17.76■□□□□ 0.43
SPIDR-201ENST00000297423 FAM184AQ8NB25 1140 aa17.76■□□□□ 0.43
SPIDR-201ENST00000297423 KIF20AO95235 890 aa17.76■□□□□ 0.43
SPIDR-201ENST00000297423 CEBPZQ03701 1054 aaKnown RBP17.76■□□□□ 0.43
SPIDR-201ENST00000297423 ADGRB2O60241 1585 aa17.76■□□□□ 0.43
SPIDR-201ENST00000297423 LRMPQ12912 555 aa17.76■□□□□ 0.43
SPIDR-201ENST00000297423 FILIP1Q7Z7B0 1213 aa17.76■□□□□ 0.43
SPIDR-201ENST00000297423 MAP3K19Q56UN5 1328 aa17.75■□□□□ 0.43
SPIDR-201ENST00000297423 ITSN1Q15811 1721 aa17.75■□□□□ 0.43
SPIDR-201ENST00000297423 ZFP91Q96JP5 570 aaPredicted RBP17.75■□□□□ 0.43
SPIDR-201ENST00000297423 IBTKQ9P2D0 1353 aaPredicted RBP17.75■□□□□ 0.43
SPIDR-201ENST00000297423 NCOA3Q9Y6Q9 1424 aa17.75■□□□□ 0.43
SPIDR-201ENST00000297423 SLC4A2P04920 1241 aa17.75■□□□□ 0.43
SPIDR-201ENST00000297423 CCDC83Q8IWF9 413 aa17.75■□□□□ 0.43
SPIDR-201ENST00000297423 ORAI2Q96SN7 254 aa17.75■□□□□ 0.43
SPIDR-201ENST00000297423 BICD2Q8TD16 824 aa17.74■□□□□ 0.43
SPIDR-201ENST00000297423 KDM4AO75164 1064 aa17.74■□□□□ 0.43
SPIDR-201ENST00000297423 NCBP3Q53F19 620 aaKnown RBP17.74■□□□□ 0.43
SPIDR-201ENST00000297423 UTP14CQ5TAP6 766 aaKnown RBP17.74■□□□□ 0.43
SPIDR-201ENST00000297423 ADGRL3Q9HAR2 1447 aa17.74■□□□□ 0.43
SPIDR-201ENST00000297423 FAM173BQ6P4H8 233 aa17.73■□□□□ 0.43
SPIDR-201ENST00000297423 SRCIN1Q9C0H9 1055 aa17.73■□□□□ 0.43
SPIDR-201ENST00000297423 LUZP1Q86V48 1076 aa17.73■□□□□ 0.43
SPIDR-201ENST00000297423 NUTM1Q86Y26 1132 aa17.73■□□□□ 0.43
SPIDR-201ENST00000297423 CDK12Q9NYV4 1490 aaPredicted RBP17.73■□□□□ 0.43
SPIDR-201ENST00000297423 SYTL4Q96C24 671 aaPredicted RBP17.73■□□□□ 0.43
SPIDR-201ENST00000297423 TFIP11Q9UBB9 837 aaKnown RBP17.73■□□□□ 0.43
SPIDR-201ENST00000297423 CCDC192P0DO97 292 aa17.72■□□□□ 0.43
SPIDR-201ENST00000297423 DNM1Q05193 864 aaKnown RBP17.72■□□□□ 0.43
SPIDR-201ENST00000297423 DCTPP1Q9H773 170 aa17.72■□□□□ 0.43
SPIDR-201ENST00000297423 GOLGA6L19H0YKK7 550 aa17.72■□□□□ 0.43
SPIDR-201ENST00000297423 BRD1O95696 1058 aa17.71■□□□□ 0.43
SPIDR-201ENST00000297423 MX1P20591 662 aa17.71■□□□□ 0.43
SPIDR-201ENST00000297423 FLT4P35916 1363 aa17.71■□□□□ 0.43
SPIDR-201ENST00000297423 MCM2P49736 904 aa17.71■□□□□ 0.43
SPIDR-201ENST00000297423 ATP6V1DQ9Y5K8 247 aa17.71■□□□□ 0.43
SPIDR-201ENST00000297423 MCM10Q7L590 875 aa17.71■□□□□ 0.42
SPIDR-201ENST00000297423 KRT28Q7Z3Y7 464 aa17.71■□□□□ 0.42
SPIDR-201ENST00000297423 KCNH5Q8NCM2 988 aa17.71■□□□□ 0.42
SPIDR-201ENST00000297423 PHF23Q9BUL5 403 aaPredicted RBP17.71■□□□□ 0.42
SPIDR-201ENST00000297423 ANKRD26Q9UPS8 1709 aa17.71■□□□□ 0.42
SPIDR-201ENST00000297423 CCDC66A2RUB6 948 aa17.7■□□□□ 0.42
SPIDR-201ENST00000297423 BECN2A8MW95 431 aa17.7■□□□□ 0.42
SPIDR-201ENST00000297423 CYP2E1P05181 493 aaPredicted RBP17.7■□□□□ 0.42
SPIDR-201ENST00000297423 STK3Q13188 491 aa17.7■□□□□ 0.42
SPIDR-201ENST00000297423 IL16Q14005 1332 aa17.69■□□□□ 0.42
SPIDR-201ENST00000297423 COL3A1P02461 1466 aaPredicted RBP17.69■□□□□ 0.42
SPIDR-201ENST00000297423 ZNF142P52746 1687 aaPredicted RBP17.69■□□□□ 0.42
SPIDR-201ENST00000297423 POLR3GO15318 223 aaPredicted RBP17.69■□□□□ 0.42
SPIDR-201ENST00000297423 FKBP5Q13451 457 aaPredicted RBP17.69■□□□□ 0.42
SPIDR-201ENST00000297423 ZRSR1Q15695 479 aaKnown RBP17.69■□□□□ 0.42
SPIDR-201ENST00000297423 CWC27Q6UX04 472 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms