RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 FAM135BQ49AJ0 1406 aa15.96■□□□□ 0.15
TNFRSF21-201ENST00000296861 STX6O43752 255 aa15.96■□□□□ 0.14
TNFRSF21-201ENST00000296861 GJB2P29033 226 aa15.96■□□□□ 0.14
TNFRSF21-201ENST00000296861 LARP1BQ659C4 914 aaKnown RBP15.96■□□□□ 0.14
TNFRSF21-201ENST00000296861 RASEFQ8IZ41 740 aa15.96■□□□□ 0.14
TNFRSF21-201ENST00000296861 RHPN1Q8TCX5 695 aa15.96■□□□□ 0.14
TNFRSF21-201ENST00000296861 GNAT3A8MTJ3 354 aa15.95■□□□□ 0.14
TNFRSF21-201ENST00000296861 AACSQ86V21 672 aa15.95■□□□□ 0.14
TNFRSF21-201ENST00000296861 NDUFB9Q9Y6M9 179 aa15.95■□□□□ 0.14
TNFRSF21-201ENST00000296861 ZKSCAN1P17029 563 aaPredicted RBP15.95■□□□□ 0.14
TNFRSF21-201ENST00000296861 PDRG1Q9NUG6 133 aa15.95■□□□□ 0.14
TNFRSF21-201ENST00000296861 SYT1P21579 422 aa15.95■□□□□ 0.14
TNFRSF21-201ENST00000296861 CHPF2Q9P2E5 772 aa15.95■□□□□ 0.14
TNFRSF21-201ENST00000296861 PIK3C2BO00750 1634 aa15.94■□□□□ 0.14
TNFRSF21-201ENST00000296861 FSD1Q9BTV5 496 aa15.94■□□□□ 0.14
TNFRSF21-201ENST00000296861 LRRC2Q9BYS8 371 aa15.94■□□□□ 0.14
TNFRSF21-201ENST00000296861 PPP6R1Q9UPN7 881 aa15.94■□□□□ 0.14
TNFRSF21-201ENST00000296861 AMOTL2Q9Y2J4 779 aa15.94■□□□□ 0.14
TNFRSF21-201ENST00000296861 PRR36Q9H6K5 1346 aa15.94■□□□□ 0.14
TNFRSF21-201ENST00000296861 BRD1O95696 1058 aa15.94■□□□□ 0.14
TNFRSF21-201ENST00000296861 MYL6BP14649 208 aa15.94■□□□□ 0.14
TNFRSF21-201ENST00000296861 ATP8B2P98198 1209 aa15.94■□□□□ 0.14
TNFRSF21-201ENST00000296861 TRIM5Q9C035 493 aa15.93■□□□□ 0.14
TNFRSF21-201ENST00000296861 KCNQ3O43525 872 aa15.93■□□□□ 0.14
TNFRSF21-201ENST00000296861 KLHDC4Q8TBB5 520 aa15.93■□□□□ 0.14
TNFRSF21-201ENST00000296861 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.93■□□□□ 0.14
TNFRSF21-201ENST00000296861 MAP7D2Q96T17 732 aa15.93■□□□□ 0.14
TNFRSF21-201ENST00000296861 SHPRHQ149N8 1683 aa15.92■□□□□ 0.14
TNFRSF21-201ENST00000296861 PPLO60437 1756 aa15.92■□□□□ 0.14
TNFRSF21-201ENST00000296861 CWF19L2Q2TBE0 894 aaKnown RBP15.92■□□□□ 0.14
TNFRSF21-201ENST00000296861 H3BQV1 296 aa15.92■□□□□ 0.14
TNFRSF21-201ENST00000296861 IFFO2Q5TF58 517 aa15.92■□□□□ 0.14
TNFRSF21-201ENST00000296861 SASS6Q6UVJ0 657 aa15.92■□□□□ 0.14
TNFRSF21-201ENST00000296861 DNAJC2Q99543 621 aaKnown RBP15.92■□□□□ 0.14
TNFRSF21-201ENST00000296861 NCOA3Q9Y6Q9 1424 aa15.92■□□□□ 0.14
TNFRSF21-201ENST00000296861 USP44Q9H0E7 712 aa15.92■□□□□ 0.14
TNFRSF21-201ENST00000296861 CYP46A1Q9Y6A2 500 aa15.92■□□□□ 0.14
TNFRSF21-201ENST00000296861 ZFYVE9O95405 1425 aa15.92■□□□□ 0.14
TNFRSF21-201ENST00000296861 RAB11FIP3O75154 756 aa15.91■□□□□ 0.14
TNFRSF21-201ENST00000296861 NOLC1Q14978 699 aaKnown RBP eCLIP15.91■□□□□ 0.14
TNFRSF21-201ENST00000296861 LIMCH1Q9UPQ0 1083 aa15.91■□□□□ 0.14
TNFRSF21-201ENST00000296861 ATP6V1DQ9Y5K8 247 aa15.91■□□□□ 0.14
TNFRSF21-201ENST00000296861 RICTORQ6R327 1708 aa15.91■□□□□ 0.14
TNFRSF21-201ENST00000296861 PTCH1Q13635 1447 aa15.91■□□□□ 0.14
TNFRSF21-201ENST00000296861 LARGE1O95461 756 aa15.91■□□□□ 0.14
TNFRSF21-201ENST00000296861 BRPF1P55201 1214 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF21-201ENST00000296861 NCBP3Q53F19 620 aaKnown RBP15.91■□□□□ 0.14
TNFRSF21-201ENST00000296861 CCDC183Q5T5S1 534 aa15.91■□□□□ 0.14
TNFRSF21-201ENST00000296861 KIAA1210Q9ULL0 1709 aa15.91■□□□□ 0.14
TNFRSF21-201ENST00000296861 A2ML1A8K2U0 1454 aa15.91■□□□□ 0.14
TNFRSF21-201ENST00000296861 ZSCAN22P10073 491 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF21-201ENST00000296861 C16orf45Q96MC5 204 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF21-201ENST00000296861 PNPLA6Q8IY17 1366 aa15.9■□□□□ 0.14
TNFRSF21-201ENST00000296861 A0A0G2JS52 829 aa15.9■□□□□ 0.14
TNFRSF21-201ENST00000296861 GUCY1B3Q02153 619 aa15.9■□□□□ 0.14
TNFRSF21-201ENST00000296861 G3BP1Q13283 466 aaKnown RBP eCLIP15.9■□□□□ 0.14
TNFRSF21-201ENST00000296861 FMNL2Q96PY5 1086 aa15.9■□□□□ 0.14
TNFRSF21-201ENST00000296861 LGR6Q9HBX8 967 aa15.9■□□□□ 0.14
TNFRSF21-201ENST00000296861 SETBP1Q9Y6X0 1596 aa15.9■□□□□ 0.14
TNFRSF21-201ENST00000296861 MYO5BQ9ULV0 1848 aa15.9■□□□□ 0.14
TNFRSF21-201ENST00000296861 DIP2BQ9P265 1576 aa15.9■□□□□ 0.14
TNFRSF21-201ENST00000296861 CYP2E1P05181 493 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF21-201ENST00000296861 LRRC59Q96AG4 307 aaKnown RBP15.9■□□□□ 0.14
TNFRSF21-201ENST00000296861 EDC3Q96F86 508 aaKnown RBP15.9■□□□□ 0.14
TNFRSF21-201ENST00000296861 GPATCH3Q96I76 525 aa15.9■□□□□ 0.14
TNFRSF21-201ENST00000296861 SNX14Q9Y5W7 946 aa15.9■□□□□ 0.14
TNFRSF21-201ENST00000296861 ADCK5Q3MIX3 580 aa15.9■□□□□ 0.14
TNFRSF21-201ENST00000296861 ZNF530Q6P9A1 599 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF21-201ENST00000296861 RUFY2Q8WXA3 655 aa15.89■□□□□ 0.13
TNFRSF21-201ENST00000296861 KIF1BPQ96EK5 621 aa15.89■□□□□ 0.13
TNFRSF21-201ENST00000296861 LUZP1Q86V48 1076 aa15.89■□□□□ 0.13
TNFRSF21-201ENST00000296861 SOS1Q07889 1333 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF21-201ENST00000296861 A0A087WWV3 80 aa15.88■□□□□ 0.13
TNFRSF21-201ENST00000296861 PTH1RQ03431 593 aa15.88■□□□□ 0.13
TNFRSF21-201ENST00000296861 FAM184AQ8NB25 1140 aa15.88■□□□□ 0.13
TNFRSF21-201ENST00000296861 IL17REQ8NFR9 667 aa15.88■□□□□ 0.13
TNFRSF21-201ENST00000296861 ALKQ9UM73 1620 aa15.88■□□□□ 0.13
TNFRSF21-201ENST00000296861 ZRSR1Q15695 479 aaKnown RBP15.88■□□□□ 0.13
TNFRSF21-201ENST00000296861 FILIP1Q7Z7B0 1213 aa15.88■□□□□ 0.13
TNFRSF21-201ENST00000296861 STK11IPQ8N1F8 1099 aa15.88■□□□□ 0.13
TNFRSF21-201ENST00000296861 FAM227BQ96M60 508 aa15.88■□□□□ 0.13
TNFRSF21-201ENST00000296861 CLTCQ00610 1675 aaKnown RBP15.88■□□□□ 0.13
TNFRSF21-201ENST00000296861 BTBD11A6QL63 1104 aa15.87■□□□□ 0.13
TNFRSF21-201ENST00000296861 DNAAF4Q8WXU2 420 aa15.87■□□□□ 0.13
TNFRSF21-201ENST00000296861 ZBTB9Q96C00 473 aa15.87■□□□□ 0.13
TNFRSF21-201ENST00000296861 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.87■□□□□ 0.13
TNFRSF21-201ENST00000296861 VIRMAQ69YN4 1812 aaKnown RBP15.87■□□□□ 0.13
TNFRSF21-201ENST00000296861 PIK3R4Q99570 1358 aa15.87■□□□□ 0.13
TNFRSF21-201ENST00000296861 PTPRMP28827 1452 aa15.87■□□□□ 0.13
TNFRSF21-201ENST00000296861 HS1BP3Q53T59 392 aa15.87■□□□□ 0.13
TNFRSF21-201ENST00000296861 RIC3Q7Z5B4 369 aa15.87■□□□□ 0.13
TNFRSF21-201ENST00000296861 TNMDQ9H2S6 317 aa15.87■□□□□ 0.13
TNFRSF21-201ENST00000296861 F13A1P00488 732 aa15.87■□□□□ 0.13
TNFRSF21-201ENST00000296861 RUFY3Q7L099 469 aa15.87■□□□□ 0.13
TNFRSF21-201ENST00000296861 ERCC4Q92889 916 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF21-201ENST00000296861 NEUROD6Q96NK8 337 aa15.87■□□□□ 0.13
TNFRSF21-201ENST00000296861 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.87■□□□□ 0.13
TNFRSF21-201ENST00000296861 V9GYY5 206 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF21-201ENST00000296861 PPP4R3BQ5MIZ7 849 aa15.86■□□□□ 0.13
TNFRSF21-201ENST00000296861 C1orf141Q5JVX7 400 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms