RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 GSPT1P15170 499 aaKnown RBP11.43□□□□□ -0.58
PRDM9-201ENST00000296682 CWF19L2Q2TBE0 894 aaKnown RBP11.43□□□□□ -0.58
PRDM9-201ENST00000296682 PPP1R42Q7Z4L9 355 aa11.42□□□□□ -0.58
PRDM9-201ENST00000296682 NBPF7P0C2Y1 421 aaPredicted RBP11.42□□□□□ -0.58
PRDM9-201ENST00000296682 PRKCSHP14314 528 aaPredicted RBP11.42□□□□□ -0.58
PRDM9-201ENST00000296682 NFATC2IPQ8NCF5 419 aa11.42□□□□□ -0.58
PRDM9-201ENST00000296682 CHMP5Q9NZZ3 219 aa11.42□□□□□ -0.58
PRDM9-201ENST00000296682 DDIT3P35638 169 aa11.42□□□□□ -0.58
PRDM9-201ENST00000296682 TTC5Q8N0Z6 440 aa11.42□□□□□ -0.58
PRDM9-201ENST00000296682 PTPRCP08575 1304 aa11.42□□□□□ -0.58
PRDM9-201ENST00000296682 KAT6BQ8WYB5 2073 aa11.42□□□□□ -0.58
PRDM9-201ENST00000296682 NEK4P51957 841 aa11.41□□□□□ -0.58
PRDM9-201ENST00000296682 EVA1CP58658 441 aa11.41□□□□□ -0.58
PRDM9-201ENST00000296682 UPF3BQ9BZI7 483 aaKnown RBP11.41□□□□□ -0.58
PRDM9-201ENST00000296682 GLI3P10071 1580 aa11.41□□□□□ -0.58
PRDM9-201ENST00000296682 CD2BP2O95400 341 aaKnown RBP11.41□□□□□ -0.58
PRDM9-201ENST00000296682 SYTL4Q96C24 671 aaPredicted RBP11.41□□□□□ -0.58
PRDM9-201ENST00000296682 PA2G4Q9UQ80 394 aaKnown RBP11.41□□□□□ -0.58
PRDM9-201ENST00000296682 TTC22Q5TAA0 569 aa11.41□□□□□ -0.58
PRDM9-201ENST00000296682 MAP3K2Q9Y2U5 619 aa11.41□□□□□ -0.58
PRDM9-201ENST00000296682 CEMIPQ8WUJ3 1361 aa11.4□□□□□ -0.58
PRDM9-201ENST00000296682 TOM1L2Q6ZVM7 507 aa11.4□□□□□ -0.58
PRDM9-201ENST00000296682 PROSER3Q2NL68 480 aa11.4□□□□□ -0.58
PRDM9-201ENST00000296682 CCDC85AQ96PX6 553 aaPredicted RBP11.4□□□□□ -0.58
PRDM9-201ENST00000296682 PRDM11Q9NQV5 511 aa11.4□□□□□ -0.58
PRDM9-201ENST00000296682 PAPPAQ13219 1627 aa11.4□□□□□ -0.58
PRDM9-201ENST00000296682 ATP5J2-PTCD1G3V325 749 aa11.4□□□□□ -0.58
PRDM9-201ENST00000296682 RBM25P49756 843 aaKnown RBP11.4□□□□□ -0.58
PRDM9-201ENST00000296682 DNAAF4Q8WXU2 420 aa11.4□□□□□ -0.58
PRDM9-201ENST00000296682 MAP3K5Q99683 1374 aa11.39□□□□□ -0.59
PRDM9-201ENST00000296682 RGPD5Q99666 1765 aa11.39□□□□□ -0.59
PRDM9-201ENST00000296682 TATP17735 454 aaPredicted RBP11.39□□□□□ -0.59
PRDM9-201ENST00000296682 IL17RAQ96F46 866 aa11.39□□□□□ -0.59
PRDM9-201ENST00000296682 MX1P20591 662 aa11.39□□□□□ -0.59
PRDM9-201ENST00000296682 PDE1AP54750 535 aa11.39□□□□□ -0.59
PRDM9-201ENST00000296682 KLHDC4Q8TBB5 520 aa11.39□□□□□ -0.59
PRDM9-201ENST00000296682 C19orf44Q9H6X5 657 aa11.39□□□□□ -0.59
PRDM9-201ENST00000296682 USP44Q9H0E7 712 aa11.38□□□□□ -0.59
PRDM9-201ENST00000296682 REC8O95072 547 aa11.38□□□□□ -0.59
PRDM9-201ENST00000296682 CWC27Q6UX04 472 aaKnown RBP11.38□□□□□ -0.59
PRDM9-201ENST00000296682 KIAA1211Q6ZU35 1233 aa11.38□□□□□ -0.59
PRDM9-201ENST00000296682 LAMB4A4D0S4 1761 aa11.38□□□□□ -0.59
PRDM9-201ENST00000296682 MRC1P22897 1456 aa11.38□□□□□ -0.59
PRDM9-201ENST00000296682 UBR2Q8IWV8 1755 aa11.38□□□□□ -0.59
PRDM9-201ENST00000296682 TRAK2O60296 914 aa11.38□□□□□ -0.59
PRDM9-201ENST00000296682 CCDC8Q9H0W5 538 aaPredicted RBP11.38□□□□□ -0.59
PRDM9-201ENST00000296682 IFIT2P09913 472 aaKnown RBP11.37□□□□□ -0.59
PRDM9-201ENST00000296682 MCM4P33991 863 aa11.37□□□□□ -0.59
PRDM9-201ENST00000296682 DCCP43146 1447 aa11.37□□□□□ -0.59
PRDM9-201ENST00000296682 ABCA3Q99758 1704 aa11.37□□□□□ -0.59
PRDM9-201ENST00000296682 ST18O60284 1047 aa11.37□□□□□ -0.59
PRDM9-201ENST00000296682 HEG1Q9ULI3 1381 aa11.37□□□□□ -0.59
PRDM9-201ENST00000296682 K7ELQ4 463 aaPredicted RBP11.37□□□□□ -0.59
PRDM9-201ENST00000296682 CABP4P57796 275 aa11.37□□□□□ -0.59
PRDM9-201ENST00000296682 EIF4A1P60842 406 aaKnown RBP11.37□□□□□ -0.59
PRDM9-201ENST00000296682 CHAMP1Q96JM3 812 aa11.37□□□□□ -0.59
PRDM9-201ENST00000296682 GOLGA6L22H0YM25 854 aa11.36□□□□□ -0.59
PRDM9-201ENST00000296682 ERC2O15083 957 aa11.36□□□□□ -0.59
PRDM9-201ENST00000296682 RNMTO43148 476 aaKnown RBP11.36□□□□□ -0.59
PRDM9-201ENST00000296682 SSFA2P28290 1259 aa11.36□□□□□ -0.59
PRDM9-201ENST00000296682 NEXNQ0ZGT2 675 aa11.36□□□□□ -0.59
PRDM9-201ENST00000296682 SPG7Q9UQ90 795 aa11.36□□□□□ -0.59
PRDM9-201ENST00000296682 AKAP4Q5JQC9 854 aa11.36□□□□□ -0.59
PRDM9-201ENST00000296682 MCTP1Q6DN14 999 aa11.36□□□□□ -0.59
PRDM9-201ENST00000296682 MYD88Q99836 296 aa11.36□□□□□ -0.59
PRDM9-201ENST00000296682 DBF4Q9UBU7 674 aaPredicted RBP11.36□□□□□ -0.59
PRDM9-201ENST00000296682 NAP1L2Q9ULW6 460 aaPredicted RBP11.36□□□□□ -0.59
PRDM9-201ENST00000296682 MCCP23508 829 aa11.36□□□□□ -0.59
PRDM9-201ENST00000296682 ATP8B2P98198 1209 aa11.36□□□□□ -0.59
PRDM9-201ENST00000296682 EIF5BO60841 1220 aaKnown RBP11.35□□□□□ -0.59
PRDM9-201ENST00000296682 G3BP1Q13283 466 aaKnown RBP eCLIP11.35□□□□□ -0.59
PRDM9-201ENST00000296682 COPS6Q7L5N1 327 aa11.35□□□□□ -0.59
PRDM9-201ENST00000296682 GBP4Q96PP9 640 aa11.35□□□□□ -0.59
PRDM9-201ENST00000296682 SHANK3Q9BYB0 1731 aa11.35□□□□□ -0.59
PRDM9-201ENST00000296682 ARHGEF25Q86VW2 580 aa11.35□□□□□ -0.59
PRDM9-201ENST00000296682 UNC5CLQ8IV45 518 aa11.35□□□□□ -0.59
PRDM9-201ENST00000296682 CLASRPQ8N2M8 674 aaKnown RBP11.35□□□□□ -0.59
PRDM9-201ENST00000296682 FAM177BA6PVY3 158 aa11.34□□□□□ -0.59
PRDM9-201ENST00000296682 AMOTQ4VCS5 1084 aa11.34□□□□□ -0.59
PRDM9-201ENST00000296682 TNPO1Q92973 898 aaKnown RBP11.34□□□□□ -0.59
PRDM9-201ENST00000296682 SNX21Q969T3 373 aa11.34□□□□□ -0.59
PRDM9-201ENST00000296682 DIAPH3Q9NSV4 1193 aa11.34□□□□□ -0.59
PRDM9-201ENST00000296682 DDX49Q9Y6V7 483 aaKnown RBP11.34□□□□□ -0.59
PRDM9-201ENST00000296682 C5P01031 1676 aa11.34□□□□□ -0.59
PRDM9-201ENST00000296682 DDX58O95786 925 aaKnown RBP11.34□□□□□ -0.59
PRDM9-201ENST00000296682 AACSQ86V21 672 aa11.34□□□□□ -0.59
PRDM9-201ENST00000296682 RHPN1Q8TCX5 695 aa11.34□□□□□ -0.59
PRDM9-201ENST00000296682 XAGE3Q8WTP9 111 aa11.34□□□□□ -0.59
PRDM9-201ENST00000296682 NEUROD6Q96NK8 337 aa11.34□□□□□ -0.59
PRDM9-201ENST00000296682 GOLGA6L3A6NEY3 463 aa11.33□□□□□ -0.59
PRDM9-201ENST00000296682 ZGPATQ8N5A5 531 aaKnown RBP11.33□□□□□ -0.59
PRDM9-201ENST00000296682 BOLA2Q9H3K6 86 aa11.33□□□□□ -0.59
PRDM9-201ENST00000296682 USP16Q9Y5T5 823 aa11.33□□□□□ -0.59
PRDM9-201ENST00000296682 SALL3Q9BXA9 1300 aa11.33□□□□□ -0.6
PRDM9-201ENST00000296682 NDUFB9Q9Y6M9 179 aa11.33□□□□□ -0.6
PRDM9-201ENST00000296682 ZBTB3Q9H5J0 574 aa11.33□□□□□ -0.6
PRDM9-201ENST00000296682 AK9Q5TCS8 1911 aa11.32□□□□□ -0.6
PRDM9-201ENST00000296682 ZNF496Q96IT1 587 aaPredicted RBP11.32□□□□□ -0.6
PRDM9-201ENST00000296682 CPA1P15085 419 aa11.32□□□□□ -0.6
PRDM9-201ENST00000296682 KIF2CQ99661 725 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms