RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 CHRNA5P30532 468 aa14.33□□□□□ -0.12
RFC4-201ENST00000296273 KLRG1Q96E93 195 aa14.33□□□□□ -0.12
RFC4-201ENST00000296273 TNRC6CQ9HCJ0 1690 aaKnown RBP14.32□□□□□ -0.12
RFC4-201ENST00000296273 USPL1Q5W0Q7 1092 aa14.32□□□□□ -0.12
RFC4-201ENST00000296273 DNAJC10Q8IXB1 793 aa14.32□□□□□ -0.12
RFC4-201ENST00000296273 RRAGCQ9HB90 399 aa14.32□□□□□ -0.12
RFC4-201ENST00000296273 NARFQ9UHQ1 456 aa14.32□□□□□ -0.12
RFC4-201ENST00000296273 VSIG10Q8N0Z9 540 aa14.31□□□□□ -0.12
RFC4-201ENST00000296273 JMYQ8N9B5 988 aa14.31□□□□□ -0.12
RFC4-201ENST00000296273 MRC1P22897 1456 aa14.31□□□□□ -0.12
RFC4-201ENST00000296273 COL15A1P39059 1388 aa14.3□□□□□ -0.12
RFC4-201ENST00000296273 RNMTO43148 476 aaKnown RBP14.3□□□□□ -0.12
RFC4-201ENST00000296273 CYP19A1P11511 503 aaPredicted RBP14.3□□□□□ -0.12
RFC4-201ENST00000296273 SMC1BQ8NDV3 1235 aa14.3□□□□□ -0.12
RFC4-201ENST00000296273 LMNB1P20700 586 aa14.29□□□□□ -0.12
RFC4-201ENST00000296273 NFIXQ14938 502 aa14.29□□□□□ -0.12
RFC4-201ENST00000296273 LGR6Q9HBX8 967 aa14.29□□□□□ -0.12
RFC4-201ENST00000296273 NRXN2Q9P2S2 1712 aa14.28□□□□□ -0.12
RFC4-201ENST00000296273 SBF1O95248 1867 aa14.28□□□□□ -0.12
RFC4-201ENST00000296273 ZBTB1Q9Y2K1 713 aa14.28□□□□□ -0.12
RFC4-201ENST00000296273 GLTPD2A6NH11 291 aa14.27□□□□□ -0.12
RFC4-201ENST00000296273 SERPINB2P05120 415 aa14.27□□□□□ -0.12
RFC4-201ENST00000296273 SLC39A6Q13433 755 aa14.27□□□□□ -0.12
RFC4-201ENST00000296273 TTLL6Q8N841 843 aa14.27□□□□□ -0.12
RFC4-201ENST00000296273 PDZRN3Q9UPQ7 1066 aa14.27□□□□□ -0.12
RFC4-201ENST00000296273 H0YIN7 160 aa14.26□□□□□ -0.13
RFC4-201ENST00000296273 VEGFAP15692 232 aaPredicted RBP14.26□□□□□ -0.13
RFC4-201ENST00000296273 HTRA3P83110 453 aa14.26□□□□□ -0.13
RFC4-201ENST00000296273 RASSF7Q02833 373 aa14.26□□□□□ -0.13
RFC4-201ENST00000296273 AMER1Q5JTC6 1135 aaPredicted RBP14.26□□□□□ -0.13
RFC4-201ENST00000296273 DLEC1Q9Y238 1755 aa14.25□□□□□ -0.13
RFC4-201ENST00000296273 A0A087WZG4 1122 aa14.25□□□□□ -0.13
RFC4-201ENST00000296273 STARD3NLO95772 234 aa14.25□□□□□ -0.13
RFC4-201ENST00000296273 HMOX1P09601 288 aa14.25□□□□□ -0.13
RFC4-201ENST00000296273 TTC5Q8N0Z6 440 aa14.25□□□□□ -0.13
RFC4-201ENST00000296273 BCL2L12Q9HB09 334 aa14.25□□□□□ -0.13
RFC4-201ENST00000296273 AFDNP55196 1824 aaKnown RBP14.25□□□□□ -0.13
RFC4-201ENST00000296273 DIAPH1O60610 1272 aaKnown RBP14.24□□□□□ -0.13
RFC4-201ENST00000296273 MTHFSDQ2M296 383 aaKnown RBP14.24□□□□□ -0.13
RFC4-201ENST00000296273 C2CD5Q86YS7 1000 aa14.24□□□□□ -0.13
RFC4-201ENST00000296273 DPY19L2Q6NUT2 758 aa14.23□□□□□ -0.13
RFC4-201ENST00000296273 TEX13AQ9BXU3 409 aaPredicted RBP14.23□□□□□ -0.13
RFC4-201ENST00000296273 CANXP27824 592 aaKnown RBP14.22□□□□□ -0.13
RFC4-201ENST00000296273 PDE6BP35913 854 aa14.22□□□□□ -0.13
RFC4-201ENST00000296273 EIF5P55010 431 aaKnown RBP14.22□□□□□ -0.13
RFC4-201ENST00000296273 UBR2Q8IWV8 1755 aa14.22□□□□□ -0.13
RFC4-201ENST00000296273 VIRMAQ69YN4 1812 aaKnown RBP14.22□□□□□ -0.13
RFC4-201ENST00000296273 COL13A1Q5TAT6 717 aaPredicted RBP14.22□□□□□ -0.13
RFC4-201ENST00000296273 TIAM2Q8IVF5 1701 aa14.21□□□□□ -0.14
RFC4-201ENST00000296273 NFKBIEO00221 500 aa14.21□□□□□ -0.14
RFC4-201ENST00000296273 CENPBP07199 599 aaPredicted RBP14.21□□□□□ -0.14
RFC4-201ENST00000296273 PRELPP51888 382 aa14.21□□□□□ -0.14
RFC4-201ENST00000296273 TEFQ10587 303 aa14.21□□□□□ -0.14
RFC4-201ENST00000296273 BICDL1Q6ZP65 573 aa14.21□□□□□ -0.14
RFC4-201ENST00000296273 NPM2Q86SE8 214 aaKnown RBP14.21□□□□□ -0.14
RFC4-201ENST00000296273 BRIP1Q9BX63 1249 aa14.21□□□□□ -0.14
RFC4-201ENST00000296273 CARMIL3Q8ND23 1372 aa14.2□□□□□ -0.14
RFC4-201ENST00000296273 IL6STP40189 918 aaPredicted RBP14.2□□□□□ -0.14
RFC4-201ENST00000296273 ZNF790Q6PG37 636 aa14.2□□□□□ -0.14
RFC4-201ENST00000296273 GAS2L2Q8NHY3 880 aa14.2□□□□□ -0.14
RFC4-201ENST00000296273 HEG1Q9ULI3 1381 aa14.2□□□□□ -0.14
RFC4-201ENST00000296273 TBC1D9BQ66K14 1250 aa14.19□□□□□ -0.14
RFC4-201ENST00000296273 ZNF622Q969S3 477 aaKnown RBP eCLIP14.19□□□□□ -0.144e-10■□□□□ 8.7
RFC4-201ENST00000296273 ZNF496Q96IT1 587 aaPredicted RBP14.19□□□□□ -0.14
RFC4-201ENST00000296273 SCN7AQ01118 1682 aa14.18□□□□□ -0.14
RFC4-201ENST00000296273 KIF7Q2M1P5 1343 aa14.18□□□□□ -0.14
RFC4-201ENST00000296273 LTBP3Q9NS15 1303 aa14.18□□□□□ -0.14
RFC4-201ENST00000296273 GNAT3A8MTJ3 354 aa14.18□□□□□ -0.14
RFC4-201ENST00000296273 PER1O15534 1290 aaPredicted RBP14.18□□□□□ -0.14
RFC4-201ENST00000296273 ERFEQ4G0M1 354 aa14.18□□□□□ -0.14
RFC4-201ENST00000296273 PRR5LQ6MZQ0 368 aa14.18□□□□□ -0.14
RFC4-201ENST00000296273 TNS4Q8IZW8 715 aa14.18□□□□□ -0.14
RFC4-201ENST00000296273 POTECB2RU33 542 aa14.17□□□□□ -0.14
RFC4-201ENST00000296273 SOGA3Q5TF21 947 aa14.17□□□□□ -0.14
RFC4-201ENST00000296273 CNKSR1Q969H4 720 aa14.17□□□□□ -0.14
RFC4-201ENST00000296273 FMNL2Q96PY5 1086 aa14.17□□□□□ -0.14
RFC4-201ENST00000296273 SETDB2Q96T68 719 aa14.17□□□□□ -0.14
RFC4-201ENST00000296273 NPHP1O15259 732 aa14.16□□□□□ -0.14
RFC4-201ENST00000296273 C21orf2O43822 256 aa14.16□□□□□ -0.14
RFC4-201ENST00000296273 ST5P78524 1137 aa14.16□□□□□ -0.14
RFC4-201ENST00000296273 CC2D1BQ5T0F9 858 aaKnown RBP14.16□□□□□ -0.14
RFC4-201ENST00000296273 CNBD1Q8NA66 436 aa14.16□□□□□ -0.14
RFC4-201ENST00000296273 IL17REQ8NFR9 667 aa14.16□□□□□ -0.14
RFC4-201ENST00000296273 TAOK3Q9H2K8 898 aa14.16□□□□□ -0.14
RFC4-201ENST00000296273 TBC1D2BQ9UPU7 963 aa14.16□□□□□ -0.14
RFC4-201ENST00000296273 ZNF330Q9Y3S2 320 aaPredicted RBP14.16□□□□□ -0.14
RFC4-201ENST00000296273 CCDC88AQ3V6T2 1871 aa14.16□□□□□ -0.14
RFC4-201ENST00000296273 NPC1L1Q9UHC9 1359 aa14.15□□□□□ -0.14
RFC4-201ENST00000296273 U2SURPO15042 1029 aaKnown RBP14.15□□□□□ -0.14
RFC4-201ENST00000296273 HSPA1AP0DMV8 641 aaKnown RBP14.15□□□□□ -0.14
RFC4-201ENST00000296273 HSPA1BP0DMV9 641 aaKnown RBP14.15□□□□□ -0.14
RFC4-201ENST00000296273 STYK1Q6J9G0 422 aa14.15□□□□□ -0.14
RFC4-201ENST00000296273 FER1L6Q2WGJ9 1857 aa14.15□□□□□ -0.14
RFC4-201ENST00000296273 ANKRD31Q8N7Z5 1873 aa14.15□□□□□ -0.14
RFC4-201ENST00000296273 MIER1Q8N108 512 aa14.14□□□□□ -0.15
RFC4-201ENST00000296273 COL3A1P02461 1466 aaPredicted RBP14.14□□□□□ -0.15
RFC4-201ENST00000296273 DICER1Q9UPY3 1922 aaKnown RBP14.14□□□□□ -0.15
RFC4-201ENST00000296273 CEMIPQ8WUJ3 1361 aa14.14□□□□□ -0.15
RFC4-201ENST00000296273 SIPA1L3O60292 1781 aaPredicted RBP14.13□□□□□ -0.15
RFC4-201ENST00000296273 CAMTA2O94983 1202 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms