RNA–Protein interactions for RNA: ENST00000296137.6

FYCO1-201, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FYCO1, Length 8,504 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-201ENST00000296137 MAP3K9P80192 1104 aa12.68□□□□□ -0.38
FYCO1-201ENST00000296137 ZSWIM4Q9H7M6 989 aa12.68□□□□□ -0.38
FYCO1-201ENST00000296137 U2AF2P26368 475 aaKnown RBP eCLIP12.68□□□□□ -0.38
FYCO1-201ENST00000296137 MYRIPQ8NFW9 859 aa12.68□□□□□ -0.38
FYCO1-201ENST00000296137 USH1CQ9Y6N9 552 aa12.68□□□□□ -0.38
FYCO1-201ENST00000296137 GBP5Q96PP8 586 aa12.67□□□□□ -0.38
FYCO1-201ENST00000296137 TRIM7Q9C029 511 aa12.67□□□□□ -0.38
FYCO1-201ENST00000296137 EVA1CP58658 441 aa12.67□□□□□ -0.38
FYCO1-201ENST00000296137 ANAPC15P60006 121 aa12.67□□□□□ -0.38
FYCO1-201ENST00000296137 GGT6Q6P531 493 aa12.67□□□□□ -0.38
FYCO1-201ENST00000296137 WHAMMQ8TF30 809 aa12.67□□□□□ -0.38
FYCO1-201ENST00000296137 L3MBTL2Q969R5 705 aa12.67□□□□□ -0.38
FYCO1-201ENST00000296137 CASQ2O14958 399 aaPredicted RBP12.67□□□□□ -0.38
FYCO1-201ENST00000296137 AIMP1Q12904 312 aaKnown RBP12.67□□□□□ -0.38
FYCO1-201ENST00000296137 LRRC23Q53EV4 343 aaPredicted RBP12.67□□□□□ -0.38
FYCO1-201ENST00000296137 MIER3Q7Z3K6 550 aa12.67□□□□□ -0.38
FYCO1-201ENST00000296137 YEATS4O95619 227 aa12.67□□□□□ -0.38
FYCO1-201ENST00000296137 ELL2O00472 640 aaPredicted RBP12.66□□□□□ -0.38
FYCO1-201ENST00000296137 ZC4H2Q9NQZ6 224 aa12.66□□□□□ -0.38
FYCO1-201ENST00000296137 TPX2Q9ULW0 747 aaKnown RBP12.66□□□□□ -0.38
FYCO1-201ENST00000296137 KRT18P05783 430 aaKnown RBP12.66□□□□□ -0.38
FYCO1-201ENST00000296137 FERP16591 822 aa12.66□□□□□ -0.38
FYCO1-201ENST00000296137 DESP17661 470 aa12.66□□□□□ -0.38
FYCO1-201ENST00000296137 GRIPAP1Q4V328 841 aa12.66□□□□□ -0.38
FYCO1-201ENST00000296137 NUTM1Q86Y26 1132 aa12.66□□□□□ -0.38
FYCO1-201ENST00000296137 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.66□□□□□ -0.38
FYCO1-201ENST00000296137 ANAPC4Q9UJX5 808 aa12.66□□□□□ -0.38
FYCO1-201ENST00000296137 CTAGE15A4D2H0 777 aa12.66□□□□□ -0.38
FYCO1-201ENST00000296137 CTAGE8P0CG41 777 aa12.66□□□□□ -0.38
FYCO1-201ENST00000296137 CTAGE4Q8IX94 777 aa12.66□□□□□ -0.38
FYCO1-201ENST00000296137 CCDC97Q96F63 343 aaPredicted RBP12.66□□□□□ -0.38
FYCO1-201ENST00000296137 ZNF830Q96NB3 372 aaPredicted RBP12.66□□□□□ -0.38
FYCO1-201ENST00000296137 CEP104O60308 925 aa12.66□□□□□ -0.38
FYCO1-201ENST00000296137 RUNDC1Q96C34 613 aa12.66□□□□□ -0.38
FYCO1-201ENST00000296137 ZSCAN26Q16670 478 aa12.66□□□□□ -0.38
FYCO1-201ENST00000296137 STMN1P16949 149 aa12.65□□□□□ -0.38
FYCO1-201ENST00000296137 AMPHP49418 695 aa12.65□□□□□ -0.38
FYCO1-201ENST00000296137 SETDB1Q15047 1291 aa12.65□□□□□ -0.38
FYCO1-201ENST00000296137 KIF1CO43896 1103 aaKnown RBP12.65□□□□□ -0.38
FYCO1-201ENST00000296137 SREK1Q8WXA9 508 aaKnown RBP12.65□□□□□ -0.38
FYCO1-201ENST00000296137 ZBTB16Q05516 673 aa12.65□□□□□ -0.38
FYCO1-201ENST00000296137 FKBP15Q5T1M5 1219 aa12.65□□□□□ -0.38
FYCO1-201ENST00000296137 ZSCAN31Q96LW9 406 aaPredicted RBP12.65□□□□□ -0.38
FYCO1-201ENST00000296137 SLC8A1P32418 973 aa12.65□□□□□ -0.38
FYCO1-201ENST00000296137 UBE2HP62256 183 aa12.65□□□□□ -0.38
FYCO1-201ENST00000296137 PHLDB2Q86SQ0 1253 aa12.65□□□□□ -0.38
FYCO1-201ENST00000296137 HOMER2Q9NSB8 354 aa12.65□□□□□ -0.38
FYCO1-201ENST00000296137 CFAP58Q5T655 872 aa12.65□□□□□ -0.39
FYCO1-201ENST00000296137 CCDC196A0A1B0GTZ2 297 aa12.64□□□□□ -0.39
FYCO1-201ENST00000296137 SKILP12757 684 aa12.64□□□□□ -0.39
FYCO1-201ENST00000296137 MRFAP1Q9Y605 127 aa12.64□□□□□ -0.39
FYCO1-201ENST00000296137 PPP2R5AQ15172 486 aa12.64□□□□□ -0.39
FYCO1-201ENST00000296137 RNF10Q8N5U6 811 aaKnown RBP12.64□□□□□ -0.39
FYCO1-201ENST00000296137 CDKL5O76039 1030 aa12.64□□□□□ -0.39
FYCO1-201ENST00000296137 STK3Q13188 491 aa12.64□□□□□ -0.39
FYCO1-201ENST00000296137 TBC1D2Q9BYX2 928 aa12.64□□□□□ -0.39
FYCO1-201ENST00000296137 VEZTQ9HBM0 779 aa12.64□□□□□ -0.39
FYCO1-201ENST00000296137 RAD21O60216 631 aa12.64□□□□□ -0.39
FYCO1-201ENST00000296137 TEX2Q8IWB9 1127 aa12.64□□□□□ -0.39
FYCO1-201ENST00000296137 NGDNQ8NEJ9 315 aaKnown RBP12.64□□□□□ -0.39
FYCO1-201ENST00000296137 PPP1R14CQ8TAE6 165 aa12.64□□□□□ -0.39
FYCO1-201ENST00000296137 PIK3R5Q8WYR1 880 aa12.64□□□□□ -0.39
FYCO1-201ENST00000296137 IKBKGQ9Y6K9 419 aa12.64□□□□□ -0.39
FYCO1-201ENST00000296137 NDUFAB1O14561 156 aa12.63□□□□□ -0.39
FYCO1-201ENST00000296137 DNAI1Q9UI46 699 aa12.63□□□□□ -0.39
FYCO1-201ENST00000296137 ATP2B1P20020 1258 aa12.63□□□□□ -0.39
FYCO1-201ENST00000296137 DIXDC1Q155Q3 683 aa12.63□□□□□ -0.39
FYCO1-201ENST00000296137 ZKSCAN8Q15776 578 aaPredicted RBP12.63□□□□□ -0.39
FYCO1-201ENST00000296137 CCDC30Q5VVM6 783 aa12.63□□□□□ -0.39
FYCO1-201ENST00000296137 TRIM22Q8IYM9 498 aa12.63□□□□□ -0.39
FYCO1-201ENST00000296137 ARFGAP2Q8N6H7 521 aa12.63□□□□□ -0.39
FYCO1-201ENST00000296137 WASHC2AQ641Q2 1341 aa12.63□□□□□ -0.39
FYCO1-201ENST00000296137 CETN3O15182 167 aa12.63□□□□□ -0.39
FYCO1-201ENST00000296137 PHACTR2O75167 634 aa12.63□□□□□ -0.39
FYCO1-201ENST00000296137 CIB2O75838 187 aa12.63□□□□□ -0.39
FYCO1-201ENST00000296137 DDX19AQ9NUU7 478 aaKnown RBP12.63□□□□□ -0.39
FYCO1-201ENST00000296137 SMIM24O75264 130 aa12.63□□□□□ -0.39
FYCO1-201ENST00000296137 CACNA2D4Q7Z3S7 1137 aa12.63□□□□□ -0.39
FYCO1-201ENST00000296137 CCDC110Q8TBZ0 833 aa12.63□□□□□ -0.39
FYCO1-201ENST00000296137 NOL7Q9UMY1 257 aaKnown RBP12.63□□□□□ -0.39
FYCO1-201ENST00000296137 CEP131Q9UPN4 1083 aa12.63□□□□□ -0.39
FYCO1-201ENST00000296137 TRIM35Q9UPQ4 493 aa12.63□□□□□ -0.39
FYCO1-201ENST00000296137 FSD1Q9BTV5 496 aa12.62□□□□□ -0.39
FYCO1-201ENST00000296137 RRAGDQ9NQL2 400 aaPredicted RBP12.62□□□□□ -0.39
FYCO1-201ENST00000296137 CCDC144AA2RUR9 1427 aa12.62□□□□□ -0.39
FYCO1-201ENST00000296137 HMGB1P1B2RPK0 211 aaPredicted RBP12.62□□□□□ -0.39
FYCO1-201ENST00000296137 PPFIA2O75334 1257 aa12.62□□□□□ -0.39
FYCO1-201ENST00000296137 PRR16Q569H4 304 aa12.62□□□□□ -0.39
FYCO1-201ENST00000296137 ZNF165P49910 485 aa12.62□□□□□ -0.39
FYCO1-201ENST00000296137 CEP85LQ5SZL2 805 aa12.62□□□□□ -0.39
FYCO1-201ENST00000296137 CTNNBL1Q8WYA6 563 aaPredicted RBP12.62□□□□□ -0.39
FYCO1-201ENST00000296137 MATR3P43243 847 aaKnown RBP eCLIP12.62□□□□□ -0.39
FYCO1-201ENST00000296137 CHD1LQ86WJ1 897 aa12.62□□□□□ -0.39
FYCO1-201ENST00000296137 MORC4Q8TE76 937 aa12.62□□□□□ -0.39
FYCO1-201ENST00000296137 FAM177BA6PVY3 158 aa12.62□□□□□ -0.39
FYCO1-201ENST00000296137 RNF8O76064 485 aa12.62□□□□□ -0.39
FYCO1-201ENST00000296137 BAG4O95429 457 aaKnown RBP12.62□□□□□ -0.39
FYCO1-201ENST00000296137 CCDC40Q4G0X9 1142 aa12.62□□□□□ -0.39
FYCO1-201ENST00000296137 CKAP2LQ8IYA6 745 aa12.62□□□□□ -0.39
FYCO1-201ENST00000296137 CCDC7Q96M83 1385 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms