RNA–Protein interactions for RNA: ENST00000295984.7

PRRT3-201, Transcript of proline rich transmembrane protein 3, humanhuman

TSL 1 (best)

Gene PRRT3, Length 3,368 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRT3-201ENST00000295984 ATP10DQ9P241 1426 aa18.23■□□□□ 0.51
PRRT3-201ENST00000295984 USP27XA6NNY8 438 aa18.23■□□□□ 0.51
PRRT3-201ENST00000295984 RPAP1Q9BWH6 1393 aaPredicted RBP18.23■□□□□ 0.51
PRRT3-201ENST00000295984 STK3Q13188 491 aa18.23■□□□□ 0.51
PRRT3-201ENST00000295984 DACT1Q9NYF0 836 aa18.23■□□□□ 0.51
PRRT3-201ENST00000295984 CERS3Q8IU89 383 aa18.22■□□□□ 0.51
PRRT3-201ENST00000295984 DNAJC25Q9H1X3 360 aa18.22■□□□□ 0.51
PRRT3-201ENST00000295984 TAOK2Q9UL54 1235 aa18.22■□□□□ 0.51
PRRT3-201ENST00000295984 ZNF215Q9UL58 517 aaPredicted RBP18.22■□□□□ 0.51
PRRT3-201ENST00000295984 PIK3R4Q99570 1358 aa18.22■□□□□ 0.51
PRRT3-201ENST00000295984 TYRO3Q06418 890 aa18.22■□□□□ 0.51
PRRT3-201ENST00000295984 NUDT16Q96DE0 195 aaKnown RBP18.22■□□□□ 0.51
PRRT3-201ENST00000295984 LRRFIP2Q9Y608 721 aaKnown RBP18.22■□□□□ 0.51
PRRT3-201ENST00000295984 GNAI2P04899 355 aa18.21■□□□□ 0.51
PRRT3-201ENST00000295984 SLFN14P0C7P3 912 aa18.21■□□□□ 0.51
PRRT3-201ENST00000295984 CACTINQ8WUQ7 758 aaKnown RBP18.21■□□□□ 0.51
PRRT3-201ENST00000295984 EIF2S2P20042 333 aaKnown RBP18.21■□□□□ 0.51
PRRT3-201ENST00000295984 IL13P35225 146 aa18.21■□□□□ 0.51
PRRT3-201ENST00000295984 ERCC4Q92889 916 aaPredicted RBP18.21■□□□□ 0.51
PRRT3-201ENST00000295984 NUP62CLQ9H1M0 184 aa18.21■□□□□ 0.51
PRRT3-201ENST00000295984 TNMDQ9H2S6 317 aa18.21■□□□□ 0.51
PRRT3-201ENST00000295984 SNX14Q9Y5W7 946 aa18.21■□□□□ 0.51
PRRT3-201ENST00000295984 PPRC1Q5VV67 1664 aaKnown RBP18.21■□□□□ 0.5
PRRT3-201ENST00000295984 ELF2Q15723 593 aa18.21■□□□□ 0.5
PRRT3-201ENST00000295984 GORABQ5T7V8 394 aa18.21■□□□□ 0.5
PRRT3-201ENST00000295984 USHBP1Q8N6Y0 703 aa18.21■□□□□ 0.5
PRRT3-201ENST00000295984 GTF3C6Q969F1 213 aa18.21■□□□□ 0.5
PRRT3-201ENST00000295984 JAKMIP1Q96N16 626 aaKnown RBP18.21■□□□□ 0.5
PRRT3-201ENST00000295984 CBX8Q9HC52 389 aa18.21■□□□□ 0.5
PRRT3-201ENST00000295984 MROH2AA6NES4 1674 aa18.2■□□□□ 0.5
PRRT3-201ENST00000295984 LRRC7Q96NW7 1537 aa18.2■□□□□ 0.5
PRRT3-201ENST00000295984 POGZQ7Z3K3 1410 aa18.2■□□□□ 0.5
PRRT3-201ENST00000295984 CTIFO43310 598 aaKnown RBP18.2■□□□□ 0.5
PRRT3-201ENST00000295984 SURF6O75683 361 aaKnown RBP18.2■□□□□ 0.5
PRRT3-201ENST00000295984 IRX5P78411 483 aaPredicted RBP18.2■□□□□ 0.5
PRRT3-201ENST00000295984 ZFP91Q96JP5 570 aaPredicted RBP18.2■□□□□ 0.5
PRRT3-201ENST00000295984 FEZ1Q99689 392 aa18.2■□□□□ 0.5
PRRT3-201ENST00000295984 CLIP2Q9UDT6 1046 aa18.2■□□□□ 0.5
PRRT3-201ENST00000295984 TET3O43151 1660 aa18.2■□□□□ 0.5
PRRT3-201ENST00000295984 COL9A3Q14050 684 aaPredicted RBP18.2■□□□□ 0.5
PRRT3-201ENST00000295984 MAP3K11Q16584 847 aa18.2■□□□□ 0.5
PRRT3-201ENST00000295984 ADCK5Q3MIX3 580 aa18.2■□□□□ 0.5
PRRT3-201ENST00000295984 CCDC144BQ3MJ40 725 aa18.2■□□□□ 0.5
PRRT3-201ENST00000295984 CCDC144CPQ8IYA2 1237 aa18.2■□□□□ 0.5
PRRT3-201ENST00000295984 LIMCH1Q9UPQ0 1083 aa18.2■□□□□ 0.5
PRRT3-201ENST00000295984 ZSCAN25Q6NSZ9 544 aa18.19■□□□□ 0.5
PRRT3-201ENST00000295984 PRPF40BQ6NWY9 871 aaKnown RBP18.19■□□□□ 0.5
PRRT3-201ENST00000295984 TTC6Q86TZ1 520 aa18.19■□□□□ 0.5
PRRT3-201ENST00000295984 LARP1BQ659C4 914 aaKnown RBP18.19■□□□□ 0.5
PRRT3-201ENST00000295984 FUCA2Q9BTY2 467 aa18.19■□□□□ 0.5
PRRT3-201ENST00000295984 KMT5BQ4FZB7 885 aa18.19■□□□□ 0.5
PRRT3-201ENST00000295984 CEP135Q66GS9 1140 aa18.19■□□□□ 0.5
PRRT3-201ENST00000295984 NGDNQ8NEJ9 315 aaKnown RBP18.19■□□□□ 0.5
PRRT3-201ENST00000295984 FAM200AQ8TCP9 573 aa18.19■□□□□ 0.5
PRRT3-201ENST00000295984 MRVI1Q9Y6F6 885 aa18.19■□□□□ 0.5
PRRT3-201ENST00000295984 QRICH2Q9H0J4 1663 aa18.19■□□□□ 0.5
PRRT3-201ENST00000295984 TULP4Q9NRJ4 1543 aa18.18■□□□□ 0.5
PRRT3-201ENST00000295984 LMOD3Q0VAK6 560 aa18.18■□□□□ 0.5
PRRT3-201ENST00000295984 BICD2Q8TD16 824 aa18.18■□□□□ 0.5
PRRT3-201ENST00000295984 DDX11Q96FC9 970 aa18.18■□□□□ 0.5
PRRT3-201ENST00000295984 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.18■□□□□ 0.5
PRRT3-201ENST00000295984 TSPYL4Q9UJ04 414 aa18.18■□□□□ 0.5
PRRT3-201ENST00000295984 DDX41Q9UJV9 622 aaKnown RBP18.18■□□□□ 0.5
PRRT3-201ENST00000295984 KIF18AQ8NI77 898 aa18.17■□□□□ 0.5
PRRT3-201ENST00000295984 ATP6V1DQ9Y5K8 247 aa18.17■□□□□ 0.5
PRRT3-201ENST00000295984 COL3A1P02461 1466 aaPredicted RBP18.17■□□□□ 0.5
PRRT3-201ENST00000295984 MTMR6Q9Y217 621 aa18.17■□□□□ 0.5
PRRT3-201ENST00000295984 USP16Q9Y5T5 823 aa18.17■□□□□ 0.5
PRRT3-201ENST00000295984 RPGRIP1LQ68CZ1 1315 aa18.17■□□□□ 0.5
PRRT3-201ENST00000295984 EFCAB6Q5THR3 1501 aa18.17■□□□□ 0.5
PRRT3-201ENST00000295984 SMTNL1A8MU46 457 aa18.17■□□□□ 0.5
PRRT3-201ENST00000295984 AMPHP49418 695 aa18.17■□□□□ 0.5
PRRT3-201ENST00000295984 KNDC1Q76NI1 1749 aa18.17■□□□□ 0.5
PRRT3-201ENST00000295984 MYOM2P54296 1465 aa18.17■□□□□ 0.5
PRRT3-201ENST00000295984 ZNF165P49910 485 aa18.16■□□□□ 0.5
PRRT3-201ENST00000295984 TERF2Q15554 542 aa18.16■□□□□ 0.5
PRRT3-201ENST00000295984 CDC37L1Q7L3B6 337 aa18.16■□□□□ 0.5
PRRT3-201ENST00000295984 FAM135BQ49AJ0 1406 aa18.16■□□□□ 0.5
PRRT3-201ENST00000295984 POLR3GO15318 223 aaPredicted RBP18.16■□□□□ 0.5
PRRT3-201ENST00000295984 ANXA1P04083 346 aa18.16■□□□□ 0.5
PRRT3-201ENST00000295984 HSPA4P34932 840 aa18.16■□□□□ 0.5
PRRT3-201ENST00000295984 OS9Q13438 667 aaPredicted RBP18.16■□□□□ 0.5
PRRT3-201ENST00000295984 KIDINS220Q9ULH0 1771 aa18.16■□□□□ 0.5
PRRT3-201ENST00000295984 CCDC9Q9Y3X0 531 aaKnown RBP18.16■□□□□ 0.5
PRRT3-201ENST00000295984 RIMS2Q9UQ26 1411 aa18.15■□□□□ 0.5
PRRT3-201ENST00000295984 KIF1BO60333 1816 aa18.15■□□□□ 0.5
PRRT3-201ENST00000295984 KRT222Q8N1A0 295 aa18.15■□□□□ 0.5
PRRT3-201ENST00000295984 RGS12O14924 1447 aa18.15■□□□□ 0.5
PRRT3-201ENST00000295984 ANAPC15P60006 121 aa18.15■□□□□ 0.5
PRRT3-201ENST00000295984 FBXO38Q6PIJ6 1188 aa18.15■□□□□ 0.5
PRRT3-201ENST00000295984 PDRG1Q9NUG6 133 aa18.15■□□□□ 0.5
PRRT3-201ENST00000295984 ARHGEF40Q8TER5 1519 aa18.15■□□□□ 0.5
PRRT3-201ENST00000295984 MROH1Q8NDA8 1641 aa18.13■□□□□ 0.49
PRRT3-201ENST00000295984 PTH1RQ03431 593 aa18.13■□□□□ 0.49
PRRT3-201ENST00000295984 PTPN14Q15678 1187 aa18.13■□□□□ 0.49
PRRT3-201ENST00000295984 OSBPL3Q9H4L5 887 aa18.13■□□□□ 0.49
PRRT3-201ENST00000295984 NR1I2O75469 434 aa18.13■□□□□ 0.49
PRRT3-201ENST00000295984 ZNF75DP51815 510 aa18.13■□□□□ 0.49
PRRT3-201ENST00000295984 STK31Q9BXU1 1019 aa18.13■□□□□ 0.49
PRRT3-201ENST00000295984 INO80Q9ULG1 1556 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms