RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 PEAK1Q9H792 1746 aa16.12■□□□□ 0.17
KCNIP3-201ENST00000295225 NBPF7P0C2Y1 421 aaPredicted RBP16.12■□□□□ 0.17
KCNIP3-201ENST00000295225 SKOR2Q2VWA4 1001 aaPredicted RBP16.12■□□□□ 0.17
KCNIP3-201ENST00000295225 ABTB2Q8N961 1025 aa16.12■□□□□ 0.17
KCNIP3-201ENST00000295225 CEP170BQ9Y4F5 1589 aaPredicted RBP16.11■□□□□ 0.17
KCNIP3-201ENST00000295225 PTPRCP08575 1304 aa16.11■□□□□ 0.17
KCNIP3-201ENST00000295225 HMMRO75330 724 aa16.11■□□□□ 0.17
KCNIP3-201ENST00000295225 SURF6O75683 361 aaKnown RBP16.11■□□□□ 0.17
KCNIP3-201ENST00000295225 REC8O95072 547 aa16.11■□□□□ 0.17
KCNIP3-201ENST00000295225 SPG7Q9UQ90 795 aa16.11■□□□□ 0.17
KCNIP3-201ENST00000295225 ADAMTS13Q76LX8 1427 aa16.1■□□□□ 0.17
KCNIP3-201ENST00000295225 GADD45BO75293 160 aaPredicted RBP16.1■□□□□ 0.17
KCNIP3-201ENST00000295225 LMOD2Q6P5Q4 547 aa16.1■□□□□ 0.17
KCNIP3-201ENST00000295225 ESYT1Q9BSJ8 1104 aa16.1■□□□□ 0.17
KCNIP3-201ENST00000295225 USP44Q9H0E7 712 aa16.1■□□□□ 0.17
KCNIP3-201ENST00000295225 CYP2E1P05181 493 aaPredicted RBP16.1■□□□□ 0.17
KCNIP3-201ENST00000295225 LRRC59Q96AG4 307 aaKnown RBP16.1■□□□□ 0.17
KCNIP3-201ENST00000295225 USP6P35125 1406 aa16.1■□□□□ 0.17
KCNIP3-201ENST00000295225 PRAMEF22A3QJZ6 481 aa16.09■□□□□ 0.17
KCNIP3-201ENST00000295225 TRHP20396 242 aaPredicted RBP16.09■□□□□ 0.17
KCNIP3-201ENST00000295225 CHMLP26374 656 aa16.09■□□□□ 0.17
KCNIP3-201ENST00000295225 AXDND1Q5T1B0 1012 aaPredicted RBP16.09■□□□□ 0.17
KCNIP3-201ENST00000295225 HDGFL1Q5TGJ6 251 aa16.09■□□□□ 0.17
KCNIP3-201ENST00000295225 KIF13AQ9H1H9 1805 aa16.09■□□□□ 0.17
KCNIP3-201ENST00000295225 PTPRUQ92729 1446 aa16.09■□□□□ 0.17
KCNIP3-201ENST00000295225 NUCB2P80303 420 aa16.08■□□□□ 0.17
KCNIP3-201ENST00000295225 OS9Q13438 667 aaPredicted RBP16.08■□□□□ 0.17
KCNIP3-201ENST00000295225 CWC22Q9HCG8 908 aaKnown RBP16.08■□□□□ 0.17
KCNIP3-201ENST00000295225 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.08■□□□□ 0.17
KCNIP3-201ENST00000295225 COL9A3Q14050 684 aaPredicted RBP16.08■□□□□ 0.16
KCNIP3-201ENST00000295225 CC2D2BQ6DHV5 1058 aa16.08■□□□□ 0.16
KCNIP3-201ENST00000295225 PPP1R42Q7Z4L9 355 aa16.08■□□□□ 0.16
KCNIP3-201ENST00000295225 GNAT3A8MTJ3 354 aa16.08■□□□□ 0.16
KCNIP3-201ENST00000295225 CCT4P50991 539 aaKnown RBP16.08■□□□□ 0.16
KCNIP3-201ENST00000295225 CWC27Q6UX04 472 aaKnown RBP16.08■□□□□ 0.16
KCNIP3-201ENST00000295225 OVOS2A0A0J9YW53 1432 aa16.07■□□□□ 0.16
KCNIP3-201ENST00000295225 OVOS2Q6IE36 1432 aa16.07■□□□□ 0.16
KCNIP3-201ENST00000295225 SRGAP3O43295 1099 aa16.07■□□□□ 0.16
KCNIP3-201ENST00000295225 UBTFL1P0CB47 393 aaPredicted RBP16.07■□□□□ 0.16
KCNIP3-201ENST00000295225 MPRIPQ6WCQ1 1025 aa16.07■□□□□ 0.16
KCNIP3-201ENST00000295225 PA2G4Q9UQ80 394 aaKnown RBP16.07■□□□□ 0.16
KCNIP3-201ENST00000295225 REREQ9P2R6 1566 aa16.07■□□□□ 0.16
KCNIP3-201ENST00000295225 PLEKHG3A1L390 1219 aa16.06■□□□□ 0.16
KCNIP3-201ENST00000295225 APPP05067 770 aa16.06■□□□□ 0.16
KCNIP3-201ENST00000295225 CHPF2Q9P2E5 772 aa16.06■□□□□ 0.16
KCNIP3-201ENST00000295225 SOS1Q07889 1333 aaPredicted RBP16.06■□□□□ 0.16
KCNIP3-201ENST00000295225 C3P01024 1663 aa16.06■□□□□ 0.16
KCNIP3-201ENST00000295225 KCNA6P17658 529 aa16.06■□□□□ 0.16
KCNIP3-201ENST00000295225 HOXC9P31274 260 aa16.06■□□□□ 0.16
KCNIP3-201ENST00000295225 TAF7Q15545 349 aaPredicted RBP16.06■□□□□ 0.16
KCNIP3-201ENST00000295225 JARID2Q92833 1246 aaPredicted RBP16.06■□□□□ 0.16
KCNIP3-201ENST00000295225 VGLL3A8MV65 326 aa16.05■□□□□ 0.16
KCNIP3-201ENST00000295225 CCDC30Q5VVM6 783 aa16.05■□□□□ 0.16
KCNIP3-201ENST00000295225 KIAA0232Q92628 1395 aa16.05■□□□□ 0.16
KCNIP3-201ENST00000295225 PI4KAP2A4QPH2 592 aa16.05■□□□□ 0.16
KCNIP3-201ENST00000295225 ATP8B2P98198 1209 aa16.05■□□□□ 0.16
KCNIP3-201ENST00000295225 PI4KAP1Q8N8J0 262 aa16.05■□□□□ 0.16
KCNIP3-201ENST00000295225 DNAJC2Q99543 621 aaKnown RBP16.05■□□□□ 0.16
KCNIP3-201ENST00000295225 KIAA1211Q6ZU35 1233 aa16.05■□□□□ 0.16
KCNIP3-201ENST00000295225 RASEFQ8IZ41 740 aa16.05■□□□□ 0.16
KCNIP3-201ENST00000295225 CHMP3Q9Y3E7 222 aa16.05■□□□□ 0.16
KCNIP3-201ENST00000295225 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.05■□□□□ 0.16
KCNIP3-201ENST00000295225 PIP4K2AP48426 406 aaPredicted RBP16.04■□□□□ 0.16
KCNIP3-201ENST00000295225 TCEANC2Q96MN5 208 aa16.04■□□□□ 0.16
KCNIP3-201ENST00000295225 ANAPC15P60006 121 aa16.04■□□□□ 0.16
KCNIP3-201ENST00000295225 MON2Q7Z3U7 1717 aa16.04■□□□□ 0.16
KCNIP3-201ENST00000295225 RGPD8O14715 1765 aaPredicted RBP16.03■□□□□ 0.16
KCNIP3-201ENST00000295225 AIMP1Q12904 312 aaKnown RBP16.03■□□□□ 0.16
KCNIP3-201ENST00000295225 ITSN1Q15811 1721 aa16.03■□□□□ 0.16
KCNIP3-201ENST00000295225 NBPF6Q5VWK0 638 aa16.03■□□□□ 0.16
KCNIP3-201ENST00000295225 NBPF4Q96M43 638 aa16.03■□□□□ 0.16
KCNIP3-201ENST00000295225 R3HCC1Q9Y3T6 440 aaKnown RBP16.03■□□□□ 0.16
KCNIP3-201ENST00000295225 FLT4P35916 1363 aa16.03■□□□□ 0.16
KCNIP3-201ENST00000295225 UBR1Q8IWV7 1749 aa16.03■□□□□ 0.16
KCNIP3-201ENST00000295225 MSNP26038 577 aaKnown RBP16.02■□□□□ 0.16
KCNIP3-201ENST00000295225 CCDC173Q0VFZ6 552 aa16.02■□□□□ 0.16
KCNIP3-201ENST00000295225 PROSER3Q2NL68 480 aa16.02■□□□□ 0.16
KCNIP3-201ENST00000295225 SIRT1Q96EB6 747 aa16.02■□□□□ 0.16
KCNIP3-201ENST00000295225 SALL3Q9BXA9 1300 aa16.02■□□□□ 0.16
KCNIP3-201ENST00000295225 TECPR2O15040 1411 aa16.02■□□□□ 0.16
KCNIP3-201ENST00000295225 CWF19L2Q2TBE0 894 aaKnown RBP16.02■□□□□ 0.15
KCNIP3-201ENST00000295225 LARGE1O95461 756 aa16.01■□□□□ 0.15
KCNIP3-201ENST00000295225 KLHDC4Q8TBB5 520 aa16.01■□□□□ 0.15
KCNIP3-201ENST00000295225 IGSF1Q8N6C5 1336 aa16.01■□□□□ 0.15
KCNIP3-201ENST00000295225 GPATCH11Q8N954 259 aa16.01■□□□□ 0.15
KCNIP3-201ENST00000295225 CNPY2Q9Y2B0 182 aa16.01■□□□□ 0.15
KCNIP3-201ENST00000295225 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.01■□□□□ 0.15
KCNIP3-201ENST00000295225 GNAI3P08754 354 aa16.01■□□□□ 0.15
KCNIP3-201ENST00000295225 SIL1Q9H173 461 aa16.01■□□□□ 0.15
KCNIP3-201ENST00000295225 PLEKHG1Q9ULL1 1385 aa16.01■□□□□ 0.15
KCNIP3-201ENST00000295225 NDUFB9Q9Y6M9 179 aa16.01■□□□□ 0.15
KCNIP3-201ENST00000295225 MYCNP04198 464 aaPredicted RBP16■□□□□ 0.15
KCNIP3-201ENST00000295225 C17orf53Q8N3J3 647 aaPredicted RBP16■□□□□ 0.15
KCNIP3-201ENST00000295225 RHPN1Q8TCX5 695 aa16■□□□□ 0.15
KCNIP3-201ENST00000295225 EIF2AK3Q9NZJ5 1116 aaKnown RBP16■□□□□ 0.15
KCNIP3-201ENST00000295225 IBTKQ9P2D0 1353 aaPredicted RBP16■□□□□ 0.15
KCNIP3-201ENST00000295225 USP48Q86UV5 1035 aa16■□□□□ 0.15
KCNIP3-201ENST00000295225 TCHHQ07283 1943 aa15.99■□□□□ 0.15
KCNIP3-201ENST00000295225 KIF24Q5T7B8 1368 aa15.99■□□□□ 0.15
KCNIP3-201ENST00000295225 CHGBP05060 677 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms