RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 BEND3Q5T5X7 828 aa17.51■□□□□ 0.39
ABCF3-201ENST00000292808 PHLPP1O60346 1717 aa17.51■□□□□ 0.39
ABCF3-201ENST00000292808 DNAAF4Q8WXU2 420 aa17.5■□□□□ 0.39
ABCF3-201ENST00000292808 BTG4Q9NY30 223 aa17.5■□□□□ 0.39
ABCF3-201ENST00000292808 LAMB4A4D0S4 1761 aa17.5■□□□□ 0.39
ABCF3-201ENST00000292808 GNAI3P08754 354 aa17.5■□□□□ 0.39
ABCF3-201ENST00000292808 EVA1CP58658 441 aa17.5■□□□□ 0.39
ABCF3-201ENST00000292808 NKX1-1Q15270 411 aaPredicted RBP17.5■□□□□ 0.39
ABCF3-201ENST00000292808 BCL11AQ9H165 835 aa17.49■□□□□ 0.39
ABCF3-201ENST00000292808 CABP4P57796 275 aa17.49■□□□□ 0.39
ABCF3-201ENST00000292808 TBC1D32Q96NH3 1257 aa17.49■□□□□ 0.39
ABCF3-201ENST00000292808 SRCIN1Q9C0H9 1055 aa17.49■□□□□ 0.39
ABCF3-201ENST00000292808 MFAP1P55081 439 aaKnown RBP17.48■□□□□ 0.39
ABCF3-201ENST00000292808 DDX21Q9NR30 783 aaKnown RBP eCLIP17.48■□□□□ 0.39
ABCF3-201ENST00000292808 LRRFIP2Q9Y608 721 aaKnown RBP17.48■□□□□ 0.39
ABCF3-201ENST00000292808 DISP2A7MBM2 1401 aa17.48■□□□□ 0.39
ABCF3-201ENST00000292808 PLCH1Q4KWH8 1693 aa17.48■□□□□ 0.39
ABCF3-201ENST00000292808 PNMA6EA0A0J9YXQ4 647 aa17.47■□□□□ 0.39
ABCF3-201ENST00000292808 KCPQ6ZWJ8 1503 aa17.47■□□□□ 0.39
ABCF3-201ENST00000292808 WNK3Q9BYP7 1800 aa17.47■□□□□ 0.39
ABCF3-201ENST00000292808 BECN1Q14457 450 aa17.47■□□□□ 0.39
ABCF3-201ENST00000292808 LRP10Q7Z4F1 713 aa17.47■□□□□ 0.39
ABCF3-201ENST00000292808 HYPKQ9NX55 129 aa17.47■□□□□ 0.39
ABCF3-201ENST00000292808 ATP8B2P98198 1209 aa17.46■□□□□ 0.39
ABCF3-201ENST00000292808 KSR2Q6VAB6 950 aa17.46■□□□□ 0.39
ABCF3-201ENST00000292808 C16orf71Q8IYS4 520 aaPredicted RBP17.46■□□□□ 0.39
ABCF3-201ENST00000292808 MAP3K2Q9Y2U5 619 aa17.46■□□□□ 0.39
ABCF3-201ENST00000292808 USP16Q9Y5T5 823 aa17.46■□□□□ 0.39
ABCF3-201ENST00000292808 NFKBIBQ15653 356 aa17.46■□□□□ 0.39
ABCF3-201ENST00000292808 BMP2KLQ5H9B9 411 aa17.46■□□□□ 0.39
ABCF3-201ENST00000292808 PLEKHM2Q8IWE5 1019 aa17.46■□□□□ 0.39
ABCF3-201ENST00000292808 OTUD7AQ8TE49 926 aaPredicted RBP17.46■□□□□ 0.39
ABCF3-201ENST00000292808 NRAPQ86VF7 1730 aa17.45■□□□□ 0.38
ABCF3-201ENST00000292808 SMARCA5O60264 1052 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-201ENST00000292808 HMMRO75330 724 aa17.45■□□□□ 0.38
ABCF3-201ENST00000292808 NBPF7P0C2Y1 421 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-201ENST00000292808 UBTFL1P0CB47 393 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-201ENST00000292808 TTC5Q8N0Z6 440 aa17.45■□□□□ 0.38
ABCF3-201ENST00000292808 DDX54Q8TDD1 881 aaKnown RBP17.45■□□□□ 0.38
ABCF3-201ENST00000292808 ERVV-2B6SEH9 535 aa17.45■□□□□ 0.38
ABCF3-201ENST00000292808 SNRPA1P09661 255 aaKnown RBP17.45■□□□□ 0.38
ABCF3-201ENST00000292808 FMNL2Q96PY5 1086 aa17.45■□□□□ 0.38
ABCF3-201ENST00000292808 TNS2Q63HR2 1409 aa17.44■□□□□ 0.38
ABCF3-201ENST00000292808 APBB1O00213 710 aa17.43■□□□□ 0.38
ABCF3-201ENST00000292808 GSPT1P15170 499 aaKnown RBP17.43■□□□□ 0.38
ABCF3-201ENST00000292808 C22orf23Q9BZE7 217 aa17.43■□□□□ 0.38
ABCF3-201ENST00000292808 EXOC6BQ9Y2D4 811 aa17.43■□□□□ 0.38
ABCF3-201ENST00000292808 PIP4K2AP48426 406 aaPredicted RBP17.42■□□□□ 0.38
ABCF3-201ENST00000292808 MYL6BP14649 208 aa17.42■□□□□ 0.38
ABCF3-201ENST00000292808 AIMP1Q12904 312 aaKnown RBP17.42■□□□□ 0.38
ABCF3-201ENST00000292808 ALDH1L1O75891 902 aa17.41■□□□□ 0.38
ABCF3-201ENST00000292808 CWF19L2Q2TBE0 894 aaKnown RBP17.41■□□□□ 0.38
ABCF3-201ENST00000292808 SSH3Q8TE77 659 aa17.41■□□□□ 0.38
ABCF3-201ENST00000292808 XAGE3Q8WTP9 111 aa17.41■□□□□ 0.38
ABCF3-201ENST00000292808 ITGB4P16144 1822 aa17.41■□□□□ 0.38
ABCF3-201ENST00000292808 IBTKQ9P2D0 1353 aaPredicted RBP17.41■□□□□ 0.38
ABCF3-201ENST00000292808 POLA2Q14181 598 aa17.41■□□□□ 0.38
ABCF3-201ENST00000292808 ARFGEF2Q9Y6D5 1785 aa17.41■□□□□ 0.38
ABCF3-201ENST00000292808 TUBGCP6Q96RT7 1819 aa17.4■□□□□ 0.38
ABCF3-201ENST00000292808 COPS6Q7L5N1 327 aa17.4■□□□□ 0.38
ABCF3-201ENST00000292808 PPP1R42Q7Z4L9 355 aa17.4■□□□□ 0.38
ABCF3-201ENST00000292808 IGKV5-2P06315 115 aa17.39■□□□□ 0.37
ABCF3-201ENST00000292808 LINS1Q8NG48 757 aa17.39■□□□□ 0.37
ABCF3-201ENST00000292808 DDX58O95786 925 aaKnown RBP17.39■□□□□ 0.37
ABCF3-201ENST00000292808 TTC22Q5TAA0 569 aa17.39■□□□□ 0.37
ABCF3-201ENST00000292808 SALL3Q9BXA9 1300 aa17.38■□□□□ 0.37
ABCF3-201ENST00000292808 NBPF26B4DH59 902 aa17.38■□□□□ 0.37
ABCF3-201ENST00000292808 NBPF14Q5TI25 921 aa17.38■□□□□ 0.37
ABCF3-201ENST00000292808 NBPF10Q6P3W6 841 aaKnown RBP17.38■□□□□ 0.37
ABCF3-201ENST00000292808 NBPF15Q8N660 670 aa17.38■□□□□ 0.37
ABCF3-201ENST00000292808 LRP6O75581 1613 aa17.38■□□□□ 0.37
ABCF3-201ENST00000292808 ADAMTS2O95450 1211 aa17.38■□□□□ 0.37
ABCF3-201ENST00000292808 UTYO14607 1347 aa17.37■□□□□ 0.37
ABCF3-201ENST00000292808 PIP4K2BP78356 416 aa17.37■□□□□ 0.37
ABCF3-201ENST00000292808 TBC1D2Q9BYX2 928 aa17.37■□□□□ 0.37
ABCF3-201ENST00000292808 NUP188Q5SRE5 1749 aa17.37■□□□□ 0.37
ABCF3-201ENST00000292808 KAZALD1Q96I82 304 aa17.37■□□□□ 0.37
ABCF3-201ENST00000292808 AFDNP55196 1824 aaKnown RBP17.36■□□□□ 0.37
ABCF3-201ENST00000292808 MTX1Q13505 466 aa17.36■□□□□ 0.37
ABCF3-201ENST00000292808 TBC1D9Q6ZT07 1266 aa17.36■□□□□ 0.37
ABCF3-201ENST00000292808 RIC3Q7Z5B4 369 aa17.36■□□□□ 0.37
ABCF3-201ENST00000292808 LRRCC1Q9C099 1032 aa17.36■□□□□ 0.37
ABCF3-201ENST00000292808 SRGAP3O43295 1099 aa17.35■□□□□ 0.37
ABCF3-201ENST00000292808 METTL22Q9BUU2 404 aaPredicted RBP17.35■□□□□ 0.37
ABCF3-201ENST00000292808 SLKQ9H2G2 1235 aaPredicted RBP17.35■□□□□ 0.37
ABCF3-201ENST00000292808 NEURL1BA8MQ27 555 aa17.35■□□□□ 0.37
ABCF3-201ENST00000292808 GRM8O00222 908 aa17.35■□□□□ 0.37
ABCF3-201ENST00000292808 TOM1O60784 492 aa17.35■□□□□ 0.37
ABCF3-201ENST00000292808 PTCD1O75127 700 aaKnown RBP17.35■□□□□ 0.37
ABCF3-201ENST00000292808 PIGBQ92521 554 aa17.35■□□□□ 0.37
ABCF3-201ENST00000292808 C9orf78Q9NZ63 289 aaPredicted RBP17.35■□□□□ 0.37
ABCF3-201ENST00000292808 ERBB4Q15303 1308 aa17.35■□□□□ 0.37
ABCF3-201ENST00000292808 NWD2Q9ULI1 1742 aa17.34■□□□□ 0.37
ABCF3-201ENST00000292808 ANKRD13DQ6ZTN6 518 aa17.34■□□□□ 0.37
ABCF3-201ENST00000292808 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.34■□□□□ 0.37
ABCF3-201ENST00000292808 OSBPL3Q9H4L5 887 aa17.34■□□□□ 0.37
ABCF3-201ENST00000292808 TMOD3Q9NYL9 352 aa17.34■□□□□ 0.37
ABCF3-201ENST00000292808 SUCLG2Q96I99 432 aa17.33■□□□□ 0.37
ABCF3-201ENST00000292808 MYD88Q99836 296 aa17.33■□□□□ 0.37
ABCF3-201ENST00000292808 ANTXR1Q9H6X2 564 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms