RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 MAP3K2Q9Y2U5 619 aa20.87■□□□□ 0.93
HIF3A-203ENST00000291300 COL22A1Q8NFW1 1626 aaPredicted RBP20.87■□□□□ 0.93
HIF3A-203ENST00000291300 GNAI3P08754 354 aa20.87■□□□□ 0.93
HIF3A-203ENST00000291300 AIMP1Q12904 312 aaKnown RBP20.87■□□□□ 0.93
HIF3A-203ENST00000291300 MYL6BP14649 208 aa20.86■□□□□ 0.93
HIF3A-203ENST00000291300 DDX21Q9NR30 783 aaKnown RBP eCLIP20.86■□□□□ 0.93
HIF3A-203ENST00000291300 TTC5Q8N0Z6 440 aa20.86■□□□□ 0.93
HIF3A-203ENST00000291300 PLEKHM2Q8IWE5 1019 aa20.85■□□□□ 0.93
HIF3A-203ENST00000291300 EXOC6BQ9Y2D4 811 aa20.85■□□□□ 0.93
HIF3A-203ENST00000291300 TOGARAM1Q9Y4F4 1720 aa20.85■□□□□ 0.93
HIF3A-203ENST00000291300 COL14A1Q05707 1796 aaKnown RBP20.85■□□□□ 0.93
HIF3A-203ENST00000291300 UBTFL1P0CB47 393 aaPredicted RBP20.84■□□□□ 0.93
HIF3A-203ENST00000291300 ATP8B2P98198 1209 aa20.84■□□□□ 0.93
HIF3A-203ENST00000291300 NKX1-1Q15270 411 aaPredicted RBP20.84■□□□□ 0.93
HIF3A-203ENST00000291300 PHLPP1O60346 1717 aa20.84■□□□□ 0.93
HIF3A-203ENST00000291300 CWF19L2Q2TBE0 894 aaKnown RBP20.84■□□□□ 0.93
HIF3A-203ENST00000291300 KSR2Q6VAB6 950 aa20.84■□□□□ 0.93
HIF3A-203ENST00000291300 CHMP4AQ9BY43 222 aa20.84■□□□□ 0.93
HIF3A-203ENST00000291300 HYPKQ9NX55 129 aa20.84■□□□□ 0.93
HIF3A-203ENST00000291300 ZBTB47Q9UFB7 747 aaPredicted RBP20.84■□□□□ 0.93
HIF3A-203ENST00000291300 SNRPA1P09661 255 aaKnown RBP20.83■□□□□ 0.93
HIF3A-203ENST00000291300 PIP4K2BP78356 416 aa20.83■□□□□ 0.93
HIF3A-203ENST00000291300 LRP10Q7Z4F1 713 aa20.83■□□□□ 0.93
HIF3A-203ENST00000291300 FMNL2Q96PY5 1086 aa20.83■□□□□ 0.93
HIF3A-203ENST00000291300 SLC4A3P48751 1232 aa20.83■□□□□ 0.92
HIF3A-203ENST00000291300 HMMRO75330 724 aa20.82■□□□□ 0.92
HIF3A-203ENST00000291300 ADAMTS2O95450 1211 aa20.82■□□□□ 0.92
HIF3A-203ENST00000291300 GSPT1P15170 499 aaKnown RBP20.82■□□□□ 0.92
HIF3A-203ENST00000291300 BMP2KLQ5H9B9 411 aa20.81■□□□□ 0.92
HIF3A-203ENST00000291300 ERVV-2B6SEH9 535 aa20.81■□□□□ 0.92
HIF3A-203ENST00000291300 XAGE3Q8WTP9 111 aa20.81■□□□□ 0.92
HIF3A-203ENST00000291300 UBR2Q8IWV8 1755 aa20.8■□□□□ 0.92
HIF3A-203ENST00000291300 COPS6Q7L5N1 327 aa20.8■□□□□ 0.92
HIF3A-203ENST00000291300 KCPQ6ZWJ8 1503 aa20.79■□□□□ 0.92
HIF3A-203ENST00000291300 PAPPAQ13219 1627 aa20.79■□□□□ 0.92
HIF3A-203ENST00000291300 DISP2A7MBM2 1401 aa20.79■□□□□ 0.92
HIF3A-203ENST00000291300 MFAP1P55081 439 aaKnown RBP20.78■□□□□ 0.92
HIF3A-203ENST00000291300 PPP1R42Q7Z4L9 355 aa20.78■□□□□ 0.92
HIF3A-203ENST00000291300 PTCD1O75127 700 aaKnown RBP20.78■□□□□ 0.92
HIF3A-203ENST00000291300 IGKV5-2P06315 115 aa20.77■□□□□ 0.92
HIF3A-203ENST00000291300 ERICH6Q7L0X2 663 aa20.77■□□□□ 0.92
HIF3A-203ENST00000291300 TBC1D32Q96NH3 1257 aa20.77■□□□□ 0.92
HIF3A-203ENST00000291300 PLCH1Q4KWH8 1693 aa20.77■□□□□ 0.92
HIF3A-203ENST00000291300 LAMB4A4D0S4 1761 aa20.77■□□□□ 0.92
HIF3A-203ENST00000291300 NUTM2BA6NNL0 878 aaPredicted RBP20.77■□□□□ 0.91
HIF3A-203ENST00000291300 NUTM2EB1AL46 878 aaPredicted RBP20.77■□□□□ 0.91
HIF3A-203ENST00000291300 NBPF26B4DH59 902 aa20.77■□□□□ 0.91
HIF3A-203ENST00000291300 NBPF14Q5TI25 921 aa20.77■□□□□ 0.91
HIF3A-203ENST00000291300 NBPF10Q6P3W6 841 aaKnown RBP20.77■□□□□ 0.91
HIF3A-203ENST00000291300 NUTM2AQ8IVF1 878 aaPredicted RBP20.77■□□□□ 0.91
HIF3A-203ENST00000291300 NBPF15Q8N660 670 aa20.77■□□□□ 0.91
HIF3A-203ENST00000291300 SSH3Q8TE77 659 aa20.77■□□□□ 0.91
HIF3A-203ENST00000291300 RIC3Q7Z5B4 369 aa20.76■□□□□ 0.91
HIF3A-203ENST00000291300 IBTKQ9P2D0 1353 aaPredicted RBP20.76■□□□□ 0.91
HIF3A-203ENST00000291300 POLA2Q14181 598 aa20.75■□□□□ 0.91
HIF3A-203ENST00000291300 TTC22Q5TAA0 569 aa20.75■□□□□ 0.91
HIF3A-203ENST00000291300 ALDH1L1O75891 902 aa20.75■□□□□ 0.91
HIF3A-203ENST00000291300 TSHZ3Q63HK5 1081 aa20.75■□□□□ 0.91
HIF3A-203ENST00000291300 ANP32EQ9BTT0 268 aa20.75■□□□□ 0.91
HIF3A-203ENST00000291300 DDX58O95786 925 aaKnown RBP20.74■□□□□ 0.91
HIF3A-203ENST00000291300 LINS1Q8NG48 757 aa20.74■□□□□ 0.91
HIF3A-203ENST00000291300 DDRGK1Q96HY6 314 aa20.74■□□□□ 0.91
HIF3A-203ENST00000291300 KAZALD1Q96I82 304 aa20.74■□□□□ 0.91
HIF3A-203ENST00000291300 SRGAP3O43295 1099 aa20.74■□□□□ 0.91
HIF3A-203ENST00000291300 A1BGP04217 495 aa20.74■□□□□ 0.91
HIF3A-203ENST00000291300 TBC1D9Q6ZT07 1266 aa20.74■□□□□ 0.91
HIF3A-203ENST00000291300 PIGBQ92521 554 aa20.74■□□□□ 0.91
HIF3A-203ENST00000291300 C9orf78Q9NZ63 289 aaPredicted RBP20.74■□□□□ 0.91
HIF3A-203ENST00000291300 TNS2Q63HR2 1409 aa20.73■□□□□ 0.91
HIF3A-203ENST00000291300 ASAP1Q9ULH1 1129 aa20.73■□□□□ 0.91
HIF3A-203ENST00000291300 ITGB4P16144 1822 aa20.72■□□□□ 0.91
HIF3A-203ENST00000291300 MYD88Q99836 296 aa20.72■□□□□ 0.91
HIF3A-203ENST00000291300 LRRCC1Q9C099 1032 aa20.72■□□□□ 0.91
HIF3A-203ENST00000291300 NRAPQ86VF7 1730 aa20.72■□□□□ 0.91
HIF3A-203ENST00000291300 ANKRD13DQ6ZTN6 518 aa20.72■□□□□ 0.91
HIF3A-203ENST00000291300 JARID2Q92833 1246 aaPredicted RBP20.72■□□□□ 0.91
HIF3A-203ENST00000291300 SUCLG2Q96I99 432 aa20.72■□□□□ 0.91
HIF3A-203ENST00000291300 TMOD3Q9NYL9 352 aa20.72■□□□□ 0.91
HIF3A-203ENST00000291300 WNK3Q9BYP7 1800 aa20.72■□□□□ 0.91
HIF3A-203ENST00000291300 SALL3Q9BXA9 1300 aa20.72■□□□□ 0.91
HIF3A-203ENST00000291300 NEURL1BA8MQ27 555 aa20.71■□□□□ 0.91
HIF3A-203ENST00000291300 IL1RAPL2Q9NP60 686 aa20.71■□□□□ 0.91
HIF3A-203ENST00000291300 GRM8O00222 908 aa20.71■□□□□ 0.91
HIF3A-203ENST00000291300 TOM1O60784 492 aa20.71■□□□□ 0.91
HIF3A-203ENST00000291300 SURF6O75683 361 aaKnown RBP20.71■□□□□ 0.91
HIF3A-203ENST00000291300 METTL22Q9BUU2 404 aaPredicted RBP20.71■□□□□ 0.91
HIF3A-203ENST00000291300 UPF2Q9HAU5 1272 aaKnown RBP20.71■□□□□ 0.91
HIF3A-203ENST00000291300 KAT6BQ8WYB5 2073 aa20.7■□□□□ 0.91
HIF3A-203ENST00000291300 ARFGEF2Q9Y6D5 1785 aa20.7■□□□□ 0.91
HIF3A-203ENST00000291300 PDE1AP54750 535 aa20.7■□□□□ 0.9
HIF3A-203ENST00000291300 C22orf23Q9BZE7 217 aa20.7■□□□□ 0.9
HIF3A-203ENST00000291300 SDSP20132 328 aa20.69■□□□□ 0.9
HIF3A-203ENST00000291300 TTLL7Q6ZT98 887 aa20.69■□□□□ 0.9
HIF3A-203ENST00000291300 ATG3Q9NT62 314 aa20.69■□□□□ 0.9
HIF3A-203ENST00000291300 UTYO14607 1347 aa20.69■□□□□ 0.9
HIF3A-203ENST00000291300 ATP5J2-PTCD1G3V325 749 aa20.68■□□□□ 0.9
HIF3A-203ENST00000291300 UBAP1LF5GYI3 381 aa20.68■□□□□ 0.9
HIF3A-203ENST00000291300 GCKRQ14397 625 aa20.68■□□□□ 0.9
HIF3A-203ENST00000291300 PA2G4Q9UQ80 394 aaKnown RBP20.68■□□□□ 0.9
HIF3A-203ENST00000291300 SPATA31A1Q5TZJ5 1347 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms