RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 KDM4FA0A1W2PPD8 638 aa23.52■■□□□ 1.35
SHF-201ENST00000290894 CYP27B1O15528 508 aa23.52■■□□□ 1.35
SHF-201ENST00000290894 MYL6BP14649 208 aa23.52■■□□□ 1.35
SHF-201ENST00000290894 N4BP2Q86UW6 1770 aaPredicted RBP23.51■■□□□ 1.35
SHF-201ENST00000290894 MX1P20591 662 aa23.51■■□□□ 1.35
SHF-201ENST00000290894 NUTM1Q86Y26 1132 aa23.51■■□□□ 1.35
SHF-201ENST00000290894 SSH3Q8TE77 659 aa23.51■■□□□ 1.35
SHF-201ENST00000290894 HEG1Q9ULI3 1381 aa23.51■■□□□ 1.35
SHF-201ENST00000290894 NCOA3Q9Y6Q9 1424 aa23.5■■□□□ 1.35
SHF-201ENST00000290894 SIPA1L3O60292 1781 aaPredicted RBP23.5■■□□□ 1.35
SHF-201ENST00000290894 IFNL2Q8IZJ0 200 aa23.5■■□□□ 1.35
SHF-201ENST00000290894 PRDM11Q9NQV5 511 aa23.5■■□□□ 1.35
SHF-201ENST00000290894 OVOS2A0A0G2JMS6 1433 aa23.49■■□□□ 1.35
SHF-201ENST00000290894 ZNF496Q96IT1 587 aaPredicted RBP23.49■■□□□ 1.35
SHF-201ENST00000290894 C9orf78Q9NZ63 289 aaPredicted RBP23.49■■□□□ 1.35
SHF-201ENST00000290894 SLAIN2Q9P270 581 aa23.49■■□□□ 1.35
SHF-201ENST00000290894 SALL3Q9BXA9 1300 aa23.48■■□□□ 1.35
SHF-201ENST00000290894 TRIM6-TRIM34B2RNG4 842 aa23.48■■□□□ 1.35
SHF-201ENST00000290894 HSP90AB1P08238 724 aaKnown RBP23.48■■□□□ 1.35
SHF-201ENST00000290894 RILPL2Q969X0 211 aa23.48■■□□□ 1.35
SHF-201ENST00000290894 USP26Q9BXU7 913 aa23.48■■□□□ 1.35
SHF-201ENST00000290894 CHMP4AQ9BY43 222 aa23.48■■□□□ 1.35
SHF-201ENST00000290894 CRYBG1Q9Y4K1 1723 aa23.48■■□□□ 1.35
SHF-201ENST00000290894 CASC1Q6TDU7 716 aa23.48■■□□□ 1.35
SHF-201ENST00000290894 KSR2Q6VAB6 950 aa23.48■■□□□ 1.35
SHF-201ENST00000290894 OSBPL3Q9H4L5 887 aa23.48■■□□□ 1.35
SHF-201ENST00000290894 PDIA6Q15084 440 aa23.47■■□□□ 1.35
SHF-201ENST00000290894 LMTK3Q96Q04 1460 aa23.47■■□□□ 1.35
SHF-201ENST00000290894 STRCQ7RTU9 1775 aa23.46■■□□□ 1.35
SHF-201ENST00000290894 SNX21Q969T3 373 aa23.46■■□□□ 1.35
SHF-201ENST00000290894 MAP4K4O95819 1239 aaPredicted RBP23.46■■□□□ 1.35
SHF-201ENST00000290894 UNC5CLQ8IV45 518 aa23.46■■□□□ 1.35
SHF-201ENST00000290894 SCN11AQ9UI33 1791 aa23.45■■□□□ 1.34
SHF-201ENST00000290894 POLA2Q14181 598 aa23.45■■□□□ 1.34
SHF-201ENST00000290894 TOM1L2Q6ZVM7 507 aa23.45■■□□□ 1.34
SHF-201ENST00000290894 DDX21Q9NR30 783 aaKnown RBP eCLIP23.45■■□□□ 1.34
SHF-201ENST00000290894 HYPKQ9NX55 129 aa23.45■■□□□ 1.34
SHF-201ENST00000290894 USP16Q9Y5T5 823 aa23.45■■□□□ 1.34
SHF-201ENST00000290894 HSP90AA1P07900 732 aaKnown RBP23.43■■□□□ 1.34
SHF-201ENST00000290894 RHPN1Q8TCX5 695 aa23.43■■□□□ 1.34
SHF-201ENST00000290894 GSE1Q14687 1217 aa23.43■■□□□ 1.34
SHF-201ENST00000290894 TTC5Q8N0Z6 440 aa23.43■■□□□ 1.34
SHF-201ENST00000290894 DCAF5Q96JK2 942 aa23.43■■□□□ 1.34
SHF-201ENST00000290894 PA2G4Q9UQ80 394 aaKnown RBP23.43■■□□□ 1.34
SHF-201ENST00000290894 ADAMTS7Q9UKP4 1686 aa23.43■■□□□ 1.34
SHF-201ENST00000290894 C5P01031 1676 aa23.42■■□□□ 1.34
SHF-201ENST00000290894 OS9Q13438 667 aaPredicted RBP23.42■■□□□ 1.34
SHF-201ENST00000290894 RIC3Q7Z5B4 369 aa23.42■■□□□ 1.34
SHF-201ENST00000290894 STRN4Q9NRL3 753 aa23.42■■□□□ 1.34
SHF-201ENST00000290894 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.42■■□□□ 1.34
SHF-201ENST00000290894 CHMP5Q9NZZ3 219 aa23.42■■□□□ 1.34
SHF-201ENST00000290894 CABP4P57796 275 aa23.41■■□□□ 1.34
SHF-201ENST00000290894 XAGE3Q8WTP9 111 aa23.41■■□□□ 1.34
SHF-201ENST00000290894 ERC2O15083 957 aa23.41■■□□□ 1.34
SHF-201ENST00000290894 COPS6Q7L5N1 327 aa23.41■■□□□ 1.34
SHF-201ENST00000290894 CPDO75976 1380 aa23.41■■□□□ 1.34
SHF-201ENST00000290894 JARID2Q92833 1246 aaPredicted RBP23.4■■□□□ 1.34
SHF-201ENST00000290894 K7ELQ4 463 aaPredicted RBP23.39■■□□□ 1.34
SHF-201ENST00000290894 DDX58O95786 925 aaKnown RBP23.39■■□□□ 1.33
SHF-201ENST00000290894 ALDH1L1O75891 902 aa23.38■■□□□ 1.33
SHF-201ENST00000290894 REC8O95072 547 aa23.38■■□□□ 1.33
SHF-201ENST00000290894 IGKV5-2P06315 115 aa23.38■■□□□ 1.33
SHF-201ENST00000290894 SOS2Q07890 1332 aaPredicted RBP23.38■■□□□ 1.33
SHF-201ENST00000290894 LINS1Q8NG48 757 aa23.38■■□□□ 1.33
SHF-201ENST00000290894 KIF1BPQ96EK5 621 aa23.38■■□□□ 1.33
SHF-201ENST00000290894 SUCLG2Q96I99 432 aa23.38■■□□□ 1.33
SHF-201ENST00000290894 STAP2Q9UGK3 403 aa23.38■■□□□ 1.33
SHF-201ENST00000290894 GRM8O00222 908 aa23.37■■□□□ 1.33
SHF-201ENST00000290894 RAB11FIP3O75154 756 aa23.37■■□□□ 1.33
SHF-201ENST00000290894 DDX54Q8TDD1 881 aaKnown RBP23.37■■□□□ 1.33
SHF-201ENST00000290894 WDR17Q8IZU2 1322 aa23.37■■□□□ 1.33
SHF-201ENST00000290894 SNRPA1P09661 255 aaKnown RBP23.36■■□□□ 1.33
SHF-201ENST00000290894 KAZALD1Q96I82 304 aa23.36■■□□□ 1.33
SHF-201ENST00000290894 MYD88Q99836 296 aa23.36■■□□□ 1.33
SHF-201ENST00000290894 BICC1Q9H694 974 aaKnown RBP23.36■■□□□ 1.33
SHF-201ENST00000290894 CHMLP26374 656 aa23.36■■□□□ 1.33
SHF-201ENST00000290894 ESYT1Q9BSJ8 1104 aa23.36■■□□□ 1.33
SHF-201ENST00000290894 IL25Q9H293 177 aa23.36■■□□□ 1.33
SHF-201ENST00000290894 RABEP1Q15276 862 aa23.35■■□□□ 1.33
SHF-201ENST00000290894 FMNL2Q96PY5 1086 aa23.35■■□□□ 1.33
SHF-201ENST00000290894 TUBGCP6Q96RT7 1819 aa23.35■■□□□ 1.33
SHF-201ENST00000290894 LARP1Q6PKG0 1096 aaKnown RBP23.35■■□□□ 1.33
SHF-201ENST00000290894 ZCRB1Q8TBF4 217 aaKnown RBP23.35■■□□□ 1.33
SHF-201ENST00000290894 ANO2Q9NQ90 1003 aa23.35■■□□□ 1.33
SHF-201ENST00000290894 DDIT3P35638 169 aa23.34■■□□□ 1.33
SHF-201ENST00000290894 KLHDC4Q8TBB5 520 aa23.34■■□□□ 1.33
SHF-201ENST00000290894 PI4K2BQ8TCG2 481 aa23.34■■□□□ 1.33
SHF-201ENST00000290894 SIL1Q9H173 461 aa23.34■■□□□ 1.33
SHF-201ENST00000290894 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.34■■□□□ 1.33
SHF-201ENST00000290894 MCM4P33991 863 aa23.32■■□□□ 1.32
SHF-201ENST00000290894 NEXNQ0ZGT2 675 aa23.32■■□□□ 1.32
SHF-201ENST00000290894 ANKRD13DQ6ZTN6 518 aa23.32■■□□□ 1.32
SHF-201ENST00000290894 PKD1L3Q7Z443 1732 aa23.32■■□□□ 1.32
SHF-201ENST00000290894 NEURL1BA8MQ27 555 aa23.32■■□□□ 1.32
SHF-201ENST00000290894 ATP5J2-PTCD1G3V325 749 aa23.32■■□□□ 1.32
SHF-201ENST00000290894 PTCD1O75127 700 aaKnown RBP23.32■■□□□ 1.32
SHF-201ENST00000290894 EVA1CP58658 441 aa23.32■■□□□ 1.32
SHF-201ENST00000290894 MTX1Q13505 466 aa23.32■■□□□ 1.32
SHF-201ENST00000290894 COL5A2P05997 1499 aaPredicted RBP23.32■■□□□ 1.32
SHF-201ENST00000290894 EIF5BO60841 1220 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms