RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 RBM42Q9BTD8 480 aaKnown RBP14.61□□□□□ -0.07
CHRNB3-201ENST00000289957 BABAM1Q9NWV8 329 aa14.61□□□□□ -0.07
CHRNB3-201ENST00000289957 CHPF2Q9P2E5 772 aa14.61□□□□□ -0.07
CHRNB3-201ENST00000289957 KDM2BQ8NHM5 1336 aa14.61□□□□□ -0.07
CHRNB3-201ENST00000289957 SLC4A2P04920 1241 aa14.61□□□□□ -0.07
CHRNB3-201ENST00000289957 KRT27Q7Z3Y8 459 aa14.61□□□□□ -0.07
CHRNB3-201ENST00000289957 PHAXQ9H814 394 aaKnown RBP14.61□□□□□ -0.07
CHRNB3-201ENST00000289957 CRBNQ96SW2 442 aa14.6□□□□□ -0.07
CHRNB3-201ENST00000289957 ZNF428Q96B54 188 aa14.59□□□□□ -0.07
CHRNB3-201ENST00000289957 SBF2Q86WG5 1849 aa14.59□□□□□ -0.07
CHRNB3-201ENST00000289957 TRIM27P14373 513 aa14.59□□□□□ -0.07
CHRNB3-201ENST00000289957 FMNL2Q96PY5 1086 aa14.58□□□□□ -0.08
CHRNB3-201ENST00000289957 CT47B1P0C2W7 299 aaPredicted RBP14.58□□□□□ -0.08
CHRNB3-201ENST00000289957 MYL6BP14649 208 aa14.58□□□□□ -0.08
CHRNB3-201ENST00000289957 PDIA6Q15084 440 aa14.58□□□□□ -0.08
CHRNB3-201ENST00000289957 DNAJC10Q8IXB1 793 aa14.58□□□□□ -0.08
CHRNB3-201ENST00000289957 BTAF1O14981 1849 aa14.57□□□□□ -0.08
CHRNB3-201ENST00000289957 F6X3S4 739 aa14.57□□□□□ -0.08
CHRNB3-201ENST00000289957 TRIM37O94972 964 aa14.57□□□□□ -0.08
CHRNB3-201ENST00000289957 A1BGP04217 495 aa14.57□□□□□ -0.08
CHRNB3-201ENST00000289957 CANXP27824 592 aaKnown RBP14.57□□□□□ -0.08
CHRNB3-201ENST00000289957 SMIM5Q71RC9 77 aa14.57□□□□□ -0.08
CHRNB3-201ENST00000289957 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.57□□□□□ -0.08
CHRNB3-201ENST00000289957 DEKP35659 375 aaKnown RBP14.57□□□□□ -0.08
CHRNB3-201ENST00000289957 ALDH1L2Q3SY69 923 aa14.57□□□□□ -0.08
CHRNB3-201ENST00000289957 CENPQQ7L2Z9 268 aaPredicted RBP14.57□□□□□ -0.08
CHRNB3-201ENST00000289957 SNRPA1P09661 255 aaKnown RBP14.56□□□□□ -0.08
CHRNB3-201ENST00000289957 COG6Q9Y2V7 657 aa14.56□□□□□ -0.08
CHRNB3-201ENST00000289957 PALLDQ8WX93 1383 aa14.56□□□□□ -0.08
CHRNB3-201ENST00000289957 NBPF26B4DH59 902 aa14.55□□□□□ -0.08
CHRNB3-201ENST00000289957 ITPK1Q13572 414 aa14.55□□□□□ -0.08
CHRNB3-201ENST00000289957 NBPF14Q5TI25 921 aa14.55□□□□□ -0.08
CHRNB3-201ENST00000289957 NBPF10Q6P3W6 841 aaKnown RBP14.55□□□□□ -0.08
CHRNB3-201ENST00000289957 NBPF15Q8N660 670 aa14.55□□□□□ -0.08
CHRNB3-201ENST00000289957 GOLGB1Q14789 3259 aaKnown RBP14.55□□□□□ -0.08
CHRNB3-201ENST00000289957 CCDC30Q5VVM6 783 aa14.55□□□□□ -0.08
CHRNB3-201ENST00000289957 NHSQ6T4R5 1651 aa14.55□□□□□ -0.08
CHRNB3-201ENST00000289957 DDRGK1Q96HY6 314 aa14.54□□□□□ -0.08
CHRNB3-201ENST00000289957 SRCAPQ6ZRS2 3230 aa14.54□□□□□ -0.08
CHRNB3-201ENST00000289957 AIMP1Q12904 312 aaKnown RBP14.54□□□□□ -0.08
CHRNB3-201ENST00000289957 ATF7IPQ6VMQ6 1270 aa14.54□□□□□ -0.08
CHRNB3-201ENST00000289957 LRP10Q7Z4F1 713 aa14.54□□□□□ -0.08
CHRNB3-201ENST00000289957 LOC102724428A0A0B4J2F2 783 aa14.53□□□□□ -0.08
CHRNB3-201ENST00000289957 SIK1P57059 783 aa14.53□□□□□ -0.08
CHRNB3-201ENST00000289957 FLIIQ13045 1269 aa14.53□□□□□ -0.08
CHRNB3-201ENST00000289957 ZKSCAN2Q63HK3 967 aa14.53□□□□□ -0.08
CHRNB3-201ENST00000289957 TJP1Q07157 1748 aa14.53□□□□□ -0.08
CHRNB3-201ENST00000289957 TMEM57Q8N5G2 664 aa14.53□□□□□ -0.08
CHRNB3-201ENST00000289957 STK31Q9BXU1 1019 aa14.53□□□□□ -0.08
CHRNB3-201ENST00000289957 ZNF330Q9Y3S2 320 aaPredicted RBP14.53□□□□□ -0.08
CHRNB3-201ENST00000289957 ATP6V1AP38606 617 aa14.52□□□□□ -0.08
CHRNB3-201ENST00000289957 RTL5Q5HYW3 569 aaPredicted RBP14.52□□□□□ -0.08
CHRNB3-201ENST00000289957 HOXB7P09629 217 aa14.52□□□□□ -0.09
CHRNB3-201ENST00000289957 LAMB4A4D0S4 1761 aa14.51□□□□□ -0.09
CHRNB3-201ENST00000289957 KIF16BQ96L93 1317 aa14.51□□□□□ -0.09
CHRNB3-201ENST00000289957 BRPF1P55201 1214 aaPredicted RBP14.51□□□□□ -0.09
CHRNB3-201ENST00000289957 FKBP5Q13451 457 aaPredicted RBP14.51□□□□□ -0.09
CHRNB3-201ENST00000289957 FAM196AQ6ZSG2 479 aa14.51□□□□□ -0.09
CHRNB3-201ENST00000289957 AMIGO3Q86WK7 504 aa14.51□□□□□ -0.09
CHRNB3-201ENST00000289957 MYH14Q7Z406 1995 aaKnown RBP14.51□□□□□ -0.09
CHRNB3-201ENST00000289957 CYP19A1P11511 503 aaPredicted RBP14.5□□□□□ -0.09
CHRNB3-201ENST00000289957 LRRC4BQ9NT99 713 aa14.5□□□□□ -0.09
CHRNB3-201ENST00000289957 ZBTB1Q9Y2K1 713 aa14.5□□□□□ -0.09
CHRNB3-201ENST00000289957 SLC4A10Q6U841 1118 aa14.5□□□□□ -0.09
CHRNB3-201ENST00000289957 FTSJ3Q8IY81 847 aaKnown RBP14.5□□□□□ -0.09
CHRNB3-201ENST00000289957 DZIP1LQ8IYY4 767 aaKnown RBP14.5□□□□□ -0.09
CHRNB3-201ENST00000289957 LINC00116Q8NCU8 138 aa14.5□□□□□ -0.09
CHRNB3-201ENST00000289957 XAGE3Q8WTP9 111 aa14.5□□□□□ -0.09
CHRNB3-201ENST00000289957 DBF4Q9UBU7 674 aaPredicted RBP14.5□□□□□ -0.09
CHRNB3-201ENST00000289957 TTLL7Q6ZT98 887 aa14.49□□□□□ -0.09
CHRNB3-201ENST00000289957 BCL11BQ9C0K0 894 aaPredicted RBP14.49□□□□□ -0.09
CHRNB3-201ENST00000289957 DDX21Q9NR30 783 aaKnown RBP eCLIP14.49□□□□□ -0.09
CHRNB3-201ENST00000289957 ADCY9O60503 1353 aa14.49□□□□□ -0.09
CHRNB3-201ENST00000289957 PI4KAP2A4QPH2 592 aa14.49□□□□□ -0.09
CHRNB3-201ENST00000289957 COPS6Q7L5N1 327 aa14.49□□□□□ -0.09
CHRNB3-201ENST00000289957 ITPRIPQ8IWB1 547 aa14.49□□□□□ -0.09
CHRNB3-201ENST00000289957 PI4KAP1Q8N8J0 262 aa14.49□□□□□ -0.09
CHRNB3-201ENST00000289957 ABCC4O15439 1325 aa14.48□□□□□ -0.09
CHRNB3-201ENST00000289957 PROM2Q8N271 834 aa14.48□□□□□ -0.09
CHRNB3-201ENST00000289957 CRKLP46109 303 aaKnown RBP14.47□□□□□ -0.09
CHRNB3-201ENST00000289957 NBR1Q14596 966 aa14.47□□□□□ -0.09
CHRNB3-201ENST00000289957 INTS5Q6P9B9 1019 aaKnown RBP14.47□□□□□ -0.09
CHRNB3-201ENST00000289957 PDE3AQ14432 1141 aa14.46□□□□□ -0.09
CHRNB3-201ENST00000289957 VSIG10Q8N0Z9 540 aa14.46□□□□□ -0.09
CHRNB3-201ENST00000289957 SOS1Q07889 1333 aaPredicted RBP14.46□□□□□ -0.09
CHRNB3-201ENST00000289957 ARXQ96QS3 562 aa14.46□□□□□ -0.09
CHRNB3-201ENST00000289957 C1orf115Q9H7X2 142 aa14.46□□□□□ -0.09
CHRNB3-201ENST00000289957 CCNL1Q9UK58 526 aaPredicted RBP14.46□□□□□ -0.09
CHRNB3-201ENST00000289957 MAP3K2Q9Y2U5 619 aa14.46□□□□□ -0.09
CHRNB3-201ENST00000289957 IPO8O15397 1037 aaKnown RBP14.45□□□□□ -0.1
CHRNB3-201ENST00000289957 MVPQ14764 893 aaKnown RBP14.45□□□□□ -0.1
CHRNB3-201ENST00000289957 ZBTB3Q9H5J0 574 aa14.45□□□□□ -0.1
CHRNB3-201ENST00000289957 LY75O60449 1722 aa14.45□□□□□ -0.1
CHRNB3-201ENST00000289957 COL5A3P25940 1745 aaPredicted RBP14.45□□□□□ -0.1
CHRNB3-201ENST00000289957 FAM161AQ3B820 660 aa14.45□□□□□ -0.1
CHRNB3-201ENST00000289957 ARHGAP45Q92619 1136 aa14.45□□□□□ -0.1
CHRNB3-201ENST00000289957 PTPRCP08575 1304 aa14.45□□□□□ -0.1
CHRNB3-201ENST00000289957 CACNA1FO60840 1977 aa14.45□□□□□ -0.1
CHRNB3-201ENST00000289957 STARD3NLO95772 234 aa14.44□□□□□ -0.1
CHRNB3-201ENST00000289957 APBA3O96018 575 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms