RNA–Protein interactions for RNA: ENST00000278572.10

RPS3-201, Transcript of ribosomal protein S3, humanhuman

TSL 3 BASIC

Gene RPS3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-201ENST00000278572 PHACTR3Q96KR7 559 aa19.76■□□□□ 0.75
RPS3-201ENST00000278572 TEX13AQ9BXU3 409 aaPredicted RBP19.76■□□□□ 0.75
RPS3-201ENST00000278572 NARFQ9UHQ1 456 aa19.76■□□□□ 0.75
RPS3-201ENST00000278572 KIF13BQ9NQT8 1826 aa19.76■□□□□ 0.75
RPS3-201ENST00000278572 HEG1Q9ULI3 1381 aa19.75■□□□□ 0.75
RPS3-201ENST00000278572 POLRMTO00411 1230 aaKnown RBP19.75■□□□□ 0.75
RPS3-201ENST00000278572 FCHSD2O94868 740 aa19.75■□□□□ 0.75
RPS3-201ENST00000278572 ZNF496Q96IT1 587 aaPredicted RBP19.75■□□□□ 0.75
RPS3-201ENST00000278572 CANXP27824 592 aaKnown RBP19.74■□□□□ 0.75
RPS3-201ENST00000278572 RTF1Q92541 710 aaKnown RBP19.74■□□□□ 0.75
RPS3-201ENST00000278572 FMNL2Q96PY5 1086 aa19.74■□□□□ 0.75
RPS3-201ENST00000278572 GPBP1L1Q9HC44 474 aaPredicted RBP19.74■□□□□ 0.75
RPS3-201ENST00000278572 UBR2Q8IWV8 1755 aa19.73■□□□□ 0.75
RPS3-201ENST00000278572 A0A087WZG4 1122 aa19.73■□□□□ 0.75
RPS3-201ENST00000278572 TM4SF1P30408 202 aa19.73■□□□□ 0.75
RPS3-201ENST00000278572 SENP3-EIF4A1A0A087X0R7 540 aa19.72■□□□□ 0.75
RPS3-201ENST00000278572 BTBD11A6QL63 1104 aa19.72■□□□□ 0.75
RPS3-201ENST00000278572 KIAA1551Q9HCM1 1747 aa19.72■□□□□ 0.75
RPS3-201ENST00000278572 PIM2Q9P1W9 311 aa19.72■□□□□ 0.75
RPS3-201ENST00000278572 EIF5P55010 431 aaKnown RBP19.71■□□□□ 0.75
RPS3-201ENST00000278572 NFIXQ14938 502 aa19.71■□□□□ 0.75
RPS3-201ENST00000278572 NEFMP07197 916 aa19.7■□□□□ 0.74
RPS3-201ENST00000278572 NPM2Q86SE8 214 aaKnown RBP19.7■□□□□ 0.74
RPS3-201ENST00000278572 KCNA3P22001 575 aa19.69■□□□□ 0.74
RPS3-201ENST00000278572 DALRD3Q5D0E6 543 aaKnown RBP19.69■□□□□ 0.74
RPS3-201ENST00000278572 ARHGAP27Q6ZUM4 889 aa19.69■□□□□ 0.74
RPS3-201ENST00000278572 ZNF526Q8TF50 670 aaPredicted RBP19.69■□□□□ 0.74
RPS3-201ENST00000278572 BCL2L12Q9HB09 334 aa19.69■□□□□ 0.74
RPS3-201ENST00000278572 VIRMAQ69YN4 1812 aaKnown RBP19.69■□□□□ 0.74
RPS3-201ENST00000278572 HTATSF1O43719 755 aaKnown RBP19.68■□□□□ 0.74
RPS3-201ENST00000278572 IL6STP40189 918 aaPredicted RBP19.68■□□□□ 0.74
RPS3-201ENST00000278572 ZNF330Q9Y3S2 320 aaPredicted RBP19.68■□□□□ 0.74
RPS3-201ENST00000278572 N4BP2Q86UW6 1770 aaPredicted RBP19.67■□□□□ 0.74
RPS3-201ENST00000278572 MCM10Q7L590 875 aa19.67■□□□□ 0.74
RPS3-201ENST00000278572 SIPA1L3O60292 1781 aaPredicted RBP19.66■□□□□ 0.74
RPS3-201ENST00000278572 SERPINB2P05120 415 aa19.66■□□□□ 0.74
RPS3-201ENST00000278572 CHRNA5P30532 468 aa19.66■□□□□ 0.74
RPS3-201ENST00000278572 KCNQ3O43525 872 aa19.64■□□□□ 0.73
RPS3-201ENST00000278572 A1BGP04217 495 aa19.63■□□□□ 0.73
RPS3-201ENST00000278572 SNRPA1P09661 255 aaKnown RBP19.63■□□□□ 0.73
RPS3-201ENST00000278572 BICDL1Q6ZP65 573 aa19.63■□□□□ 0.73
RPS3-201ENST00000278572 CARMIL3Q8ND23 1372 aa19.62■□□□□ 0.73
RPS3-201ENST00000278572 DCTN1Q14203 1278 aa19.62■□□□□ 0.73
RPS3-201ENST00000278572 PNNQ9H307 717 aaKnown RBP19.62■□□□□ 0.73
RPS3-201ENST00000278572 TBC1D2BQ9UPU7 963 aa19.62■□□□□ 0.73
RPS3-201ENST00000278572 BRCA1P38398 1863 aaKnown RBP19.61■□□□□ 0.73
RPS3-201ENST00000278572 TAF7Q15545 349 aaPredicted RBP19.61■□□□□ 0.73
RPS3-201ENST00000278572 TBC1D9BQ66K14 1250 aa19.61■□□□□ 0.73
RPS3-201ENST00000278572 SCN7AQ01118 1682 aa19.61■□□□□ 0.73
RPS3-201ENST00000278572 NRXN2Q9P2S2 1712 aa19.6■□□□□ 0.73
RPS3-201ENST00000278572 MAPK8IP3Q9UPT6 1336 aa19.6■□□□□ 0.73
RPS3-201ENST00000278572 C9orf131Q5VYM1 1079 aa19.6■□□□□ 0.73
RPS3-201ENST00000278572 DZIP3Q86Y13 1208 aaKnown RBP19.6■□□□□ 0.73
RPS3-201ENST00000278572 PDZRN3Q9UPQ7 1066 aa19.6■□□□□ 0.73
RPS3-201ENST00000278572 USP16Q9Y5T5 823 aa19.6■□□□□ 0.73
RPS3-201ENST00000278572 H0YIN7 160 aa19.59■□□□□ 0.73
RPS3-201ENST00000278572 CAMTA2O94983 1202 aa19.59■□□□□ 0.73
RPS3-201ENST00000278572 RALBP1Q15311 655 aa19.59■□□□□ 0.73
RPS3-201ENST00000278572 C2CD5Q86YS7 1000 aa19.59■□□□□ 0.73
RPS3-201ENST00000278572 PNISRQ8TF01 805 aaKnown RBP19.59■□□□□ 0.73
RPS3-201ENST00000278572 SETDB2Q96T68 719 aa19.59■□□□□ 0.73
RPS3-201ENST00000278572 TTLL6Q8N841 843 aa19.58■□□□□ 0.72
RPS3-201ENST00000278572 PLEKHF1Q96S99 279 aa19.58■□□□□ 0.72
RPS3-201ENST00000278572 ARFGEF1Q9Y6D6 1849 aa19.58■□□□□ 0.72
RPS3-201ENST00000278572 PRAMEF22A3QJZ6 481 aa19.57■□□□□ 0.72
RPS3-201ENST00000278572 KIF3CO14782 793 aa19.57■□□□□ 0.72
RPS3-201ENST00000278572 NPHP1O15259 732 aa19.57■□□□□ 0.72
RPS3-201ENST00000278572 PDE6BP35913 854 aa19.57■□□□□ 0.72
RPS3-201ENST00000278572 NFE2L2Q16236 605 aa19.57■□□□□ 0.72
RPS3-201ENST00000278572 PRR5LQ6MZQ0 368 aa19.57■□□□□ 0.72
RPS3-201ENST00000278572 CNBD1Q8NA66 436 aa19.57■□□□□ 0.72
RPS3-201ENST00000278572 BRIP1Q9BX63 1249 aa19.57■□□□□ 0.72
RPS3-201ENST00000278572 RNF181Q9P0P0 153 aa19.57■□□□□ 0.72
RPS3-201ENST00000278572 ZNF652Q9Y2D9 606 aa19.57■□□□□ 0.72
RPS3-201ENST00000278572 CEP350Q5VT06 3117 aa19.57■□□□□ 0.72
RPS3-201ENST00000278572 CLEC4GQ6UXB4 293 aa19.56■□□□□ 0.72
RPS3-201ENST00000278572 RGL2O15211 777 aa19.55■□□□□ 0.72
RPS3-201ENST00000278572 PIP4K2AP48426 406 aaPredicted RBP19.55■□□□□ 0.72
RPS3-201ENST00000278572 ST5P78524 1137 aa19.55■□□□□ 0.72
RPS3-201ENST00000278572 AFDNP55196 1824 aaKnown RBP19.55■□□□□ 0.72
RPS3-201ENST00000278572 KDM2BQ8NHM5 1336 aa19.53■□□□□ 0.72
RPS3-201ENST00000278572 ZC3H4Q9UPT8 1303 aaKnown RBP19.53■□□□□ 0.72
RPS3-201ENST00000278572 HSPA6P17066 643 aa19.53■□□□□ 0.72
RPS3-201ENST00000278572 MIS18AQ9NYP9 233 aa19.53■□□□□ 0.72
RPS3-201ENST00000278572 NBPF26B4DH59 902 aa19.52■□□□□ 0.72
RPS3-201ENST00000278572 RASSF7Q02833 373 aa19.52■□□□□ 0.72
RPS3-201ENST00000278572 NBPF10Q6P3W6 841 aaKnown RBP19.52■□□□□ 0.72
RPS3-201ENST00000278572 NBPF15Q8N660 670 aa19.52■□□□□ 0.72
RPS3-201ENST00000278572 ZNF622Q969S3 477 aaKnown RBP eCLIP19.52■□□□□ 0.72
RPS3-201ENST00000278572 TOMM70O94826 608 aa19.51■□□□□ 0.71
RPS3-201ENST00000278572 LMNB1P20700 586 aa19.51■□□□□ 0.71
RPS3-201ENST00000278572 NBPF5PQ86XG9 351 aaPredicted RBP19.51■□□□□ 0.71
RPS3-201ENST00000278572 NMRK2Q9NPI5 230 aa19.51■□□□□ 0.71
RPS3-201ENST00000278572 MYBBP1AQ9BQG0 1328 aaKnown RBP19.51■□□□□ 0.71
RPS3-201ENST00000278572 DDX10Q13206 875 aaKnown RBP19.5■□□□□ 0.71
RPS3-201ENST00000278572 CCDC24Q8N4L8 307 aa19.5■□□□□ 0.71
RPS3-201ENST00000278572 THUMPD2Q9BTF0 503 aaKnown RBP19.5■□□□□ 0.71
RPS3-201ENST00000278572 BCORQ6W2J9 1755 aa19.49■□□□□ 0.71
RPS3-201ENST00000278572 DLEC1Q9Y238 1755 aa19.49■□□□□ 0.71
RPS3-201ENST00000278572 EIF4A1P60842 406 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms