RNA–Protein interactions for RNA: ENST00000277480.6

LCN2-201, Transcript of lipocalin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene LCN2, Length 822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-201ENST00000277480 DNAJC10Q8IXB1 793 aa12.96□□□□□ -0.33
LCN2-201ENST00000277480 VSIG10Q8N0Z9 540 aa12.96□□□□□ -0.33
LCN2-201ENST00000277480 EXOC6Q8TAG9 804 aa12.96□□□□□ -0.33
LCN2-201ENST00000277480 STK31Q9BXU1 1019 aa12.96□□□□□ -0.33
LCN2-201ENST00000277480 PHAXQ9H814 394 aaKnown RBP12.96□□□□□ -0.33
LCN2-201ENST00000277480 PALLDQ8WX93 1383 aa12.95□□□□□ -0.34
LCN2-201ENST00000277480 PIP4K2AP48426 406 aaPredicted RBP12.95□□□□□ -0.34
LCN2-201ENST00000277480 PDE3AQ14432 1141 aa12.95□□□□□ -0.34
LCN2-201ENST00000277480 ARHGAP45Q92619 1136 aa12.95□□□□□ -0.34
LCN2-201ENST00000277480 CLUAP1Q96AJ1 413 aa12.95□□□□□ -0.34
LCN2-201ENST00000277480 LAMB4A4D0S4 1761 aa12.94□□□□□ -0.34
LCN2-201ENST00000277480 NBPF26B4DH59 902 aa12.94□□□□□ -0.34
LCN2-201ENST00000277480 FLIIQ13045 1269 aa12.94□□□□□ -0.34
LCN2-201ENST00000277480 ITPK1Q13572 414 aa12.94□□□□□ -0.34
LCN2-201ENST00000277480 NBPF14Q5TI25 921 aa12.94□□□□□ -0.34
LCN2-201ENST00000277480 NBPF10Q6P3W6 841 aaKnown RBP12.94□□□□□ -0.34
LCN2-201ENST00000277480 FAM196AQ6ZSG2 479 aa12.94□□□□□ -0.34
LCN2-201ENST00000277480 DZIP1LQ8IYY4 767 aaKnown RBP12.94□□□□□ -0.34
LCN2-201ENST00000277480 NBPF15Q8N660 670 aa12.94□□□□□ -0.34
LCN2-201ENST00000277480 DBF4Q9UBU7 674 aaPredicted RBP12.94□□□□□ -0.34
LCN2-201ENST00000277480 TJP1Q07157 1748 aa12.93□□□□□ -0.34
LCN2-201ENST00000277480 ABCC4O15439 1325 aa12.93□□□□□ -0.34
LCN2-201ENST00000277480 SBF2Q86WG5 1849 aa12.93□□□□□ -0.34
LCN2-201ENST00000277480 LOC102724428A0A0B4J2F2 783 aa12.93□□□□□ -0.34
LCN2-201ENST00000277480 IPO8O15397 1037 aaKnown RBP12.93□□□□□ -0.34
LCN2-201ENST00000277480 A1BGP04217 495 aa12.93□□□□□ -0.34
LCN2-201ENST00000277480 SIK1P57059 783 aa12.93□□□□□ -0.34
LCN2-201ENST00000277480 TMEM57Q8N5G2 664 aa12.93□□□□□ -0.34
LCN2-201ENST00000277480 SMARCC1Q92922 1105 aaPredicted RBP12.93□□□□□ -0.34
LCN2-201ENST00000277480 BCL11BQ9C0K0 894 aaPredicted RBP12.93□□□□□ -0.34
LCN2-201ENST00000277480 DDX21Q9NR30 783 aaKnown RBP eCLIP12.93□□□□□ -0.34
LCN2-201ENST00000277480 COG6Q9Y2V7 657 aa12.93□□□□□ -0.34
LCN2-201ENST00000277480 BTAF1O14981 1849 aa12.92□□□□□ -0.34
LCN2-201ENST00000277480 PTPRCP08575 1304 aa12.92□□□□□ -0.34
LCN2-201ENST00000277480 F6X3S4 739 aa12.92□□□□□ -0.34
LCN2-201ENST00000277480 CYP19A1P11511 503 aaPredicted RBP12.92□□□□□ -0.34
LCN2-201ENST00000277480 MYL6BP14649 208 aa12.92□□□□□ -0.34
LCN2-201ENST00000277480 API5Q9BZZ5 524 aaKnown RBP12.92□□□□□ -0.34
LCN2-201ENST00000277480 TRIM37O94972 964 aa12.91□□□□□ -0.34
LCN2-201ENST00000277480 ATP6V1AP38606 617 aa12.91□□□□□ -0.34
LCN2-201ENST00000277480 TEX13AQ9BXU3 409 aaPredicted RBP12.91□□□□□ -0.34
LCN2-201ENST00000277480 CHMP4AQ9BY43 222 aa12.91□□□□□ -0.34
LCN2-201ENST00000277480 HYPKQ9NX55 129 aa12.91□□□□□ -0.34
LCN2-201ENST00000277480 CICQ96RK0 1608 aaPredicted RBP12.91□□□□□ -0.34
LCN2-201ENST00000277480 ERBB4Q15303 1308 aa12.9□□□□□ -0.34
LCN2-201ENST00000277480 KCNQ4P56696 695 aa12.9□□□□□ -0.34
LCN2-201ENST00000277480 FKBP5Q13451 457 aaPredicted RBP12.9□□□□□ -0.34
LCN2-201ENST00000277480 FTSJ3Q8IY81 847 aaKnown RBP12.9□□□□□ -0.34
LCN2-201ENST00000277480 XAGE3Q8WTP9 111 aa12.9□□□□□ -0.34
LCN2-201ENST00000277480 ADCY9O60503 1353 aa12.9□□□□□ -0.34
LCN2-201ENST00000277480 MS4A1P11836 297 aa12.89□□□□□ -0.35
LCN2-201ENST00000277480 MVPQ14764 893 aaKnown RBP12.89□□□□□ -0.35
LCN2-201ENST00000277480 INTS5Q6P9B9 1019 aaKnown RBP12.89□□□□□ -0.35
LCN2-201ENST00000277480 LINC00116Q8NCU8 138 aa12.89□□□□□ -0.35
LCN2-201ENST00000277480 ZBTB1Q9Y2K1 713 aa12.89□□□□□ -0.35
LCN2-201ENST00000277480 STARD3NLO95772 234 aa12.88□□□□□ -0.35
LCN2-201ENST00000277480 AIMP1Q12904 312 aaKnown RBP12.88□□□□□ -0.35
LCN2-201ENST00000277480 ERICH6BQ5W0A0 696 aa12.88□□□□□ -0.35
LCN2-201ENST00000277480 INTS3Q68E01 1043 aaKnown RBP12.88□□□□□ -0.35
LCN2-201ENST00000277480 TTLL7Q6ZT98 887 aa12.88□□□□□ -0.35
LCN2-201ENST00000277480 COPS6Q7L5N1 327 aa12.88□□□□□ -0.35
LCN2-201ENST00000277480 ZNF831Q5JPB2 1677 aa12.88□□□□□ -0.35
LCN2-201ENST00000277480 PI4KAP2A4QPH2 592 aa12.87□□□□□ -0.35
LCN2-201ENST00000277480 ITPRIPQ8IWB1 547 aa12.87□□□□□ -0.35
LCN2-201ENST00000277480 PI4KAP1Q8N8J0 262 aa12.87□□□□□ -0.35
LCN2-201ENST00000277480 LRRC4BQ9NT99 713 aa12.87□□□□□ -0.35
LCN2-201ENST00000277480 RREB1Q92766 1687 aa12.86□□□□□ -0.35
LCN2-201ENST00000277480 LY75O60449 1722 aa12.86□□□□□ -0.35
LCN2-201ENST00000277480 COL5A3P25940 1745 aaPredicted RBP12.86□□□□□ -0.35
LCN2-201ENST00000277480 KAT6BQ8WYB5 2073 aa12.86□□□□□ -0.35
LCN2-201ENST00000277480 CRKLP46109 303 aaKnown RBP12.86□□□□□ -0.35
LCN2-201ENST00000277480 SLC4A10Q6U841 1118 aa12.86□□□□□ -0.35
LCN2-201ENST00000277480 KSR2Q6VAB6 950 aa12.86□□□□□ -0.35
LCN2-201ENST00000277480 CCDC87Q9NVE4 849 aa12.86□□□□□ -0.35
LCN2-201ENST00000277480 CCNL1Q9UK58 526 aaPredicted RBP12.86□□□□□ -0.35
LCN2-201ENST00000277480 MAP3K2Q9Y2U5 619 aa12.86□□□□□ -0.35
LCN2-201ENST00000277480 PXDNLA1KZ92 1463 aa12.85□□□□□ -0.35
LCN2-201ENST00000277480 ZBTB7BO15156 539 aaPredicted RBP12.85□□□□□ -0.35
LCN2-201ENST00000277480 PROM2Q8N271 834 aa12.85□□□□□ -0.35
LCN2-201ENST00000277480 DNAAF4Q8WXU2 420 aa12.85□□□□□ -0.35
LCN2-201ENST00000277480 EP400Q96L91 3159 aa12.85□□□□□ -0.35
LCN2-201ENST00000277480 EIF5P55010 431 aaKnown RBP12.84□□□□□ -0.35
LCN2-201ENST00000277480 BEND3Q5T5X7 828 aa12.84□□□□□ -0.35
LCN2-201ENST00000277480 ANKRD13DQ6ZTN6 518 aa12.84□□□□□ -0.35
LCN2-201ENST00000277480 PPP4R2Q9NY27 417 aa12.84□□□□□ -0.35
LCN2-201ENST00000277480 DDX19BQ9UMR2 479 aa12.84□□□□□ -0.35
LCN2-201ENST00000277480 ATP10DQ9P241 1426 aa12.84□□□□□ -0.35
LCN2-201ENST00000277480 CNTNAP4Q9C0A0 1308 aa12.84□□□□□ -0.35
LCN2-201ENST00000277480 CACNA1FO60840 1977 aa12.83□□□□□ -0.35
LCN2-201ENST00000277480 TNS1Q9HBL0 1735 aaKnown RBP12.83□□□□□ -0.36
LCN2-201ENST00000277480 DDX58O95786 925 aaKnown RBP12.83□□□□□ -0.36
LCN2-201ENST00000277480 APBA3O96018 575 aa12.83□□□□□ -0.36
LCN2-201ENST00000277480 IGKV5-2P06315 115 aa12.83□□□□□ -0.36
LCN2-201ENST00000277480 IL6STP40189 918 aaPredicted RBP12.83□□□□□ -0.36
LCN2-201ENST00000277480 CCT4P50991 539 aaKnown RBP12.83□□□□□ -0.36
LCN2-201ENST00000277480 SMIM5Q71RC9 77 aa12.83□□□□□ -0.36
LCN2-201ENST00000277480 AMIGO3Q86WK7 504 aa12.83□□□□□ -0.36
LCN2-201ENST00000277480 ZBTB40Q9NUA8 1239 aa12.83□□□□□ -0.36
LCN2-201ENST00000277480 ZNF330Q9Y3S2 320 aaPredicted RBP12.83□□□□□ -0.36
LCN2-201ENST00000277480 B4GALNT3Q6L9W6 998 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms