RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 SPG7Q9UQ90 795 aa16.92■□□□□ 0.3
MRPS28-201ENST00000276585 KIF7Q2M1P5 1343 aa16.92■□□□□ 0.3
MRPS28-201ENST00000276585 CNTNAP4Q9C0A0 1308 aa16.92■□□□□ 0.3
MRPS28-201ENST00000276585 PASKQ96RG2 1323 aa16.91■□□□□ 0.3
MRPS28-201ENST00000276585 KDRP35968 1356 aa16.9■□□□□ 0.3
MRPS28-201ENST00000276585 NFKBIEO00221 500 aa16.9■□□□□ 0.3
MRPS28-201ENST00000276585 PDE4DIPQ5VU43 2346 aa16.9■□□□□ 0.3
MRPS28-201ENST00000276585 VIRMAQ69YN4 1812 aaKnown RBP16.89■□□□□ 0.29
MRPS28-201ENST00000276585 ERFEQ4G0M1 354 aa16.89■□□□□ 0.29
MRPS28-201ENST00000276585 TTLL6Q8N841 843 aa16.89■□□□□ 0.29
MRPS28-201ENST00000276585 SLC4A9Q96Q91 983 aa16.89■□□□□ 0.29
MRPS28-201ENST00000276585 POLRMTO00411 1230 aaKnown RBP16.88■□□□□ 0.29
MRPS28-201ENST00000276585 DEFB115Q30KQ5 88 aa16.88■□□□□ 0.29
MRPS28-201ENST00000276585 LDHDQ86WU2 507 aa16.88■□□□□ 0.29
MRPS28-201ENST00000276585 BEGAINQ9BUH8 593 aa16.88■□□□□ 0.29
MRPS28-201ENST00000276585 USP42Q9H9J4 1324 aaKnown RBP16.88■□□□□ 0.29
MRPS28-201ENST00000276585 CCDC88AQ3V6T2 1871 aa16.88■□□□□ 0.29
MRPS28-201ENST00000276585 POLKQ9UBT6 870 aa16.87■□□□□ 0.29
MRPS28-201ENST00000276585 WASHC2AQ641Q2 1341 aa16.87■□□□□ 0.29
MRPS28-201ENST00000276585 WDR33Q9C0J8 1336 aaKnown RBP16.87■□□□□ 0.29
MRPS28-201ENST00000276585 DDNO94850 711 aaPredicted RBP16.86■□□□□ 0.29
MRPS28-201ENST00000276585 RASSF10A6NK89 507 aa16.85■□□□□ 0.29
MRPS28-201ENST00000276585 IFNL2Q8IZJ0 200 aa16.85■□□□□ 0.29
MRPS28-201ENST00000276585 TNRC18O15417 2968 aaPredicted RBP16.84■□□□□ 0.29
MRPS28-201ENST00000276585 IQCA1LA6NCM1 817 aa16.84■□□□□ 0.29
MRPS28-201ENST00000276585 PHKG2P15735 406 aa16.84■□□□□ 0.29
MRPS28-201ENST00000276585 EAPPQ56P03 285 aaPredicted RBP16.84■□□□□ 0.29
MRPS28-201ENST00000276585 ABT1Q9ULW3 272 aaKnown RBP16.84■□□□□ 0.29
MRPS28-201ENST00000276585 COL5A3P25940 1745 aaPredicted RBP16.83■□□□□ 0.28
MRPS28-201ENST00000276585 TM4SF1P30408 202 aa16.83■□□□□ 0.28
MRPS28-201ENST00000276585 MAPK8IP2Q13387 824 aaPredicted RBP16.83■□□□□ 0.28
MRPS28-201ENST00000276585 AMER1Q5JTC6 1135 aaPredicted RBP16.83■□□□□ 0.28
MRPS28-201ENST00000276585 C2CD5Q86YS7 1000 aa16.83■□□□□ 0.28
MRPS28-201ENST00000276585 MCOLN1Q9GZU1 580 aa16.83■□□□□ 0.28
MRPS28-201ENST00000276585 ZNF219Q9P2Y4 722 aaPredicted RBP16.83■□□□□ 0.28
MRPS28-201ENST00000276585 CLEC11AQ9Y240 323 aa16.83■□□□□ 0.28
MRPS28-201ENST00000276585 ITGBL1O95965 494 aaPredicted RBP16.82■□□□□ 0.28
MRPS28-201ENST00000276585 TNNT2P45379 298 aaPredicted RBP16.82■□□□□ 0.28
MRPS28-201ENST00000276585 CRKLP46109 303 aaKnown RBP16.82■□□□□ 0.28
MRPS28-201ENST00000276585 PAXIP1Q6ZW49 1069 aaPredicted RBP16.82■□□□□ 0.28
MRPS28-201ENST00000276585 H0YIN7 160 aa16.81■□□□□ 0.28
MRPS28-201ENST00000276585 PPM1GO15355 546 aaPredicted RBP16.81■□□□□ 0.28
MRPS28-201ENST00000276585 ZPR1O75312 459 aa16.81■□□□□ 0.28
MRPS28-201ENST00000276585 TAF1DQ9H5J8 278 aaPredicted RBP16.81■□□□□ 0.28
MRPS28-201ENST00000276585 TSKSQ9UJT2 592 aa16.81■□□□□ 0.28
MRPS28-201ENST00000276585 MYH14Q7Z406 1995 aaKnown RBP16.8■□□□□ 0.28
MRPS28-201ENST00000276585 PER1O15534 1290 aaPredicted RBP16.8■□□□□ 0.28
MRPS28-201ENST00000276585 GRM1Q13255 1194 aa16.8■□□□□ 0.28
MRPS28-201ENST00000276585 EIF4A2Q14240 407 aaKnown RBP16.8■□□□□ 0.28
MRPS28-201ENST00000276585 EYA1Q99502 592 aa16.8■□□□□ 0.28
MRPS28-201ENST00000276585 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.8■□□□□ 0.28
MRPS28-201ENST00000276585 ZNF831Q5JPB2 1677 aa16.8■□□□□ 0.28
MRPS28-201ENST00000276585 C21orf2O43822 256 aa16.79■□□□□ 0.28
MRPS28-201ENST00000276585 USPL1Q5W0Q7 1092 aa16.79■□□□□ 0.28
MRPS28-201ENST00000276585 PTCD1O75127 700 aaKnown RBP16.78■□□□□ 0.28
MRPS28-201ENST00000276585 ZNF622Q969S3 477 aaKnown RBP eCLIP16.78■□□□□ 0.286e-8■□□□□ 10.3
MRPS28-201ENST00000276585 TAOK3Q9H2K8 898 aa16.78■□□□□ 0.28
MRPS28-201ENST00000276585 DLEC1Q9Y238 1755 aa16.77■□□□□ 0.28
MRPS28-201ENST00000276585 ERVV-2B6SEH9 535 aa16.77■□□□□ 0.28
MRPS28-201ENST00000276585 NFIXQ14938 502 aa16.77■□□□□ 0.28
MRPS28-201ENST00000276585 KNSTRNQ9Y448 316 aa16.77■□□□□ 0.28
MRPS28-201ENST00000276585 DICER1Q9UPY3 1922 aaKnown RBP16.76■□□□□ 0.27
MRPS28-201ENST00000276585 SERPINB2P05120 415 aa16.76■□□□□ 0.27
MRPS28-201ENST00000276585 ECE1P42892 770 aa16.76■□□□□ 0.27
MRPS28-201ENST00000276585 PRPF38BQ5VTL8 546 aaKnown RBP16.76■□□□□ 0.27
MRPS28-201ENST00000276585 MORC1Q86VD1 984 aa16.76■□□□□ 0.27
MRPS28-201ENST00000276585 CNTROBQ8N137 903 aa16.76■□□□□ 0.27
MRPS28-201ENST00000276585 CAPNS2Q96L46 248 aa16.76■□□□□ 0.27
MRPS28-201ENST00000276585 GPR101Q96P66 508 aaPredicted RBP16.76■□□□□ 0.27
MRPS28-201ENST00000276585 CABP4P57796 275 aa16.75■□□□□ 0.27
MRPS28-201ENST00000276585 DGKZQ13574 1117 aa16.75■□□□□ 0.27
MRPS28-201ENST00000276585 MAP1SQ66K74 1059 aaPredicted RBP16.75■□□□□ 0.27
MRPS28-201ENST00000276585 L3MBTL3Q96JM7 780 aaPredicted RBP16.75■□□□□ 0.27
MRPS28-201ENST00000276585 HACL1Q9UJ83 578 aa16.74■□□□□ 0.27
MRPS28-201ENST00000276585 AFDNP55196 1824 aaKnown RBP16.74■□□□□ 0.27
MRPS28-201ENST00000276585 NPC1L1Q9UHC9 1359 aa16.74■□□□□ 0.27
MRPS28-201ENST00000276585 COL3A1P02461 1466 aaPredicted RBP16.73■□□□□ 0.27
MRPS28-201ENST00000276585 LTBP3Q9NS15 1303 aa16.73■□□□□ 0.27
MRPS28-201ENST00000276585 SCN4AP35499 1836 aa16.73■□□□□ 0.27
MRPS28-201ENST00000276585 CYP4F22Q6NT55 531 aa16.73■□□□□ 0.27
MRPS28-201ENST00000276585 CARMIL3Q8ND23 1372 aa16.73■□□□□ 0.27
MRPS28-201ENST00000276585 HSP90AB1P08238 724 aaKnown RBP16.72■□□□□ 0.27
MRPS28-201ENST00000276585 EPHX2P34913 555 aa16.72■□□□□ 0.27
MRPS28-201ENST00000276585 SOX10P56693 466 aa16.71■□□□□ 0.27
MRPS28-201ENST00000276585 INTS5Q6P9B9 1019 aaKnown RBP16.71■□□□□ 0.27
MRPS28-201ENST00000276585 FER1L6Q2WGJ9 1857 aa16.71■□□□□ 0.27
MRPS28-201ENST00000276585 THSD7BQ9C0I4 1608 aa16.7■□□□□ 0.26
MRPS28-201ENST00000276585 NRXN2Q9P2S2 1712 aa16.7■□□□□ 0.26
MRPS28-201ENST00000276585 SCN11AQ9UI33 1791 aa16.7■□□□□ 0.26
MRPS28-201ENST00000276585 PNMA8AQ86V59 439 aaPredicted RBP16.7■□□□□ 0.26
MRPS28-201ENST00000276585 AEBP1Q8IUX7 1158 aa16.7■□□□□ 0.26
MRPS28-201ENST00000276585 DDX21Q9NR30 783 aaKnown RBP eCLIP16.7■□□□□ 0.26
MRPS28-201ENST00000276585 IL13P35225 146 aa16.69■□□□□ 0.26
MRPS28-201ENST00000276585 BICDL1Q6ZP65 573 aa16.69■□□□□ 0.26
MRPS28-201ENST00000276585 NARFQ9UHQ1 456 aa16.69■□□□□ 0.26
MRPS28-201ENST00000276585 SOS1Q07889 1333 aaPredicted RBP16.69■□□□□ 0.26
MRPS28-201ENST00000276585 CA12O43570 354 aa16.68■□□□□ 0.26
MRPS28-201ENST00000276585 AOC2O75106 756 aa16.68■□□□□ 0.26
MRPS28-201ENST00000276585 CC2D1BQ5T0F9 858 aaKnown RBP16.68■□□□□ 0.26
MRPS28-201ENST00000276585 PDZRN3Q9UPQ7 1066 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms