RNA–Protein interactions for RNA: ENST00000276105.3

SNX12-201, Transcript of sorting nexin 12, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene SNX12, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-201ENST00000276105 ZNF790Q6PG37 636 aa13.52□□□□□ -0.25
SNX12-201ENST00000276105 SRP68Q9UHB9 627 aaKnown RBP13.52□□□□□ -0.25
SNX12-201ENST00000276105 NARFQ9UHQ1 456 aa13.52□□□□□ -0.25
SNX12-201ENST00000276105 ADCY9O60503 1353 aa13.51□□□□□ -0.25
SNX12-201ENST00000276105 COL15A1P39059 1388 aa13.51□□□□□ -0.25
SNX12-201ENST00000276105 GIGYF1O75420 1035 aaPredicted RBP13.51□□□□□ -0.25
SNX12-201ENST00000276105 U2AF1L5P0DN76 240 aaPredicted RBP13.51□□□□□ -0.25
SNX12-201ENST00000276105 TM4SF1P30408 202 aa13.51□□□□□ -0.25
SNX12-201ENST00000276105 U2AF1Q01081 240 aaKnown RBP eCLIP13.51□□□□□ -0.25
SNX12-201ENST00000276105 HEG1Q9ULI3 1381 aa13.5□□□□□ -0.25
SNX12-201ENST00000276105 A0A087WZG4 1122 aa13.5□□□□□ -0.25
SNX12-201ENST00000276105 HTATSF1O43719 755 aaKnown RBP13.5□□□□□ -0.25
SNX12-201ENST00000276105 PHACTR3Q96KR7 559 aa13.5□□□□□ -0.25
SNX12-201ENST00000276105 FMNL2Q96PY5 1086 aa13.5□□□□□ -0.25
SNX12-201ENST00000276105 ZBTB1Q9Y2K1 713 aa13.5□□□□□ -0.25
SNX12-201ENST00000276105 N4BP2Q86UW6 1770 aaPredicted RBP13.5□□□□□ -0.25
SNX12-201ENST00000276105 GOLGB1Q14789 3259 aaKnown RBP13.49□□□□□ -0.25
SNX12-201ENST00000276105 ATP10DQ9P241 1426 aa13.49□□□□□ -0.25
SNX12-201ENST00000276105 BRCA1P38398 1863 aaKnown RBP13.49□□□□□ -0.25
SNX12-201ENST00000276105 A0A0G2JLW4 131 aa13.49□□□□□ -0.25
SNX12-201ENST00000276105 POLRMTO00411 1230 aaKnown RBP13.49□□□□□ -0.25
SNX12-201ENST00000276105 DPEP1P16444 411 aa13.49□□□□□ -0.25
SNX12-201ENST00000276105 DDR1Q08345 913 aa13.49□□□□□ -0.25
SNX12-201ENST00000276105 USPL1Q5W0Q7 1092 aa13.49□□□□□ -0.25
SNX12-201ENST00000276105 RTF1Q92541 710 aaKnown RBP13.49□□□□□ -0.25
SNX12-201ENST00000276105 ZNF496Q96IT1 587 aaPredicted RBP13.49□□□□□ -0.25
SNX12-201ENST00000276105 BTBD11A6QL63 1104 aa13.48□□□□□ -0.25
SNX12-201ENST00000276105 EIF5P55010 431 aaKnown RBP13.48□□□□□ -0.25
SNX12-201ENST00000276105 PIM2Q9P1W9 311 aa13.48□□□□□ -0.25
SNX12-201ENST00000276105 BCS1LQ9Y276 419 aa13.48□□□□□ -0.25
SNX12-201ENST00000276105 NEFMP07197 916 aa13.47□□□□□ -0.25
SNX12-201ENST00000276105 CANXP27824 592 aaKnown RBP13.47□□□□□ -0.25
SNX12-201ENST00000276105 IL6STP40189 918 aaPredicted RBP13.47□□□□□ -0.25
SNX12-201ENST00000276105 COL13A1Q5TAT6 717 aaPredicted RBP13.47□□□□□ -0.25
SNX12-201ENST00000276105 GPBP1L1Q9HC44 474 aaPredicted RBP13.47□□□□□ -0.25
SNX12-201ENST00000276105 ARFGEF1Q9Y6D6 1849 aa13.47□□□□□ -0.25
SNX12-201ENST00000276105 NRXN2Q9P2S2 1712 aa13.47□□□□□ -0.25
SNX12-201ENST00000276105 KCNA3P22001 575 aa13.46□□□□□ -0.25
SNX12-201ENST00000276105 NFIXQ14938 502 aa13.46□□□□□ -0.25
SNX12-201ENST00000276105 BCL2L12Q9HB09 334 aa13.46□□□□□ -0.25
SNX12-201ENST00000276105 WWC3Q9ULE0 1092 aa13.46□□□□□ -0.25
SNX12-201ENST00000276105 DALRD3Q5D0E6 543 aaKnown RBP13.45□□□□□ -0.26
SNX12-201ENST00000276105 NPM2Q86SE8 214 aaKnown RBP13.45□□□□□ -0.26
SNX12-201ENST00000276105 PNNQ9H307 717 aaKnown RBP13.45□□□□□ -0.26
SNX12-201ENST00000276105 AFDNP55196 1824 aaKnown RBP13.44□□□□□ -0.26
SNX12-201ENST00000276105 SERPINB2P05120 415 aa13.44□□□□□ -0.26
SNX12-201ENST00000276105 ARHGAP27Q6ZUM4 889 aa13.44□□□□□ -0.26
SNX12-201ENST00000276105 PDZRN3Q9UPQ7 1066 aa13.44□□□□□ -0.26
SNX12-201ENST00000276105 SNRPA1P09661 255 aaKnown RBP13.43□□□□□ -0.26
SNX12-201ENST00000276105 SCN7AQ01118 1682 aa13.43□□□□□ -0.26
SNX12-201ENST00000276105 RGL2O15211 777 aa13.42□□□□□ -0.26
SNX12-201ENST00000276105 RALBP1Q15311 655 aa13.42□□□□□ -0.26
SNX12-201ENST00000276105 TAF7Q15545 349 aaPredicted RBP13.42□□□□□ -0.26
SNX12-201ENST00000276105 MCM10Q7L590 875 aa13.42□□□□□ -0.26
SNX12-201ENST00000276105 PNISRQ8TF01 805 aaKnown RBP13.42□□□□□ -0.26
SNX12-201ENST00000276105 KCNQ3O43525 872 aa13.41□□□□□ -0.26
SNX12-201ENST00000276105 A1BGP04217 495 aa13.41□□□□□ -0.26
SNX12-201ENST00000276105 CHRNA5P30532 468 aa13.41□□□□□ -0.26
SNX12-201ENST00000276105 DDX10Q13206 875 aaKnown RBP13.41□□□□□ -0.26
SNX12-201ENST00000276105 PLEKHF1Q96S99 279 aa13.41□□□□□ -0.26
SNX12-201ENST00000276105 DLEC1Q9Y238 1755 aa13.4□□□□□ -0.26
SNX12-201ENST00000276105 CLEC4GQ6UXB4 293 aa13.4□□□□□ -0.26
SNX12-201ENST00000276105 USP16Q9Y5T5 823 aa13.4□□□□□ -0.26
SNX12-201ENST00000276105 CARMIL3Q8ND23 1372 aa13.4□□□□□ -0.26
SNX12-201ENST00000276105 H0YIN7 160 aa13.39□□□□□ -0.27
SNX12-201ENST00000276105 CAMTA2O94983 1202 aa13.39□□□□□ -0.27
SNX12-201ENST00000276105 NFE2L2Q16236 605 aa13.39□□□□□ -0.27
SNX12-201ENST00000276105 TBC1D9BQ66K14 1250 aa13.39□□□□□ -0.27
SNX12-201ENST00000276105 DZIP3Q86Y13 1208 aaKnown RBP13.39□□□□□ -0.27
SNX12-201ENST00000276105 SETDB2Q96T68 719 aa13.39□□□□□ -0.27
SNX12-201ENST00000276105 TBC1D2BQ9UPU7 963 aa13.39□□□□□ -0.27
SNX12-201ENST00000276105 ZNF330Q9Y3S2 320 aaPredicted RBP13.39□□□□□ -0.27
SNX12-201ENST00000276105 DLG5Q8TDM6 1919 aa13.39□□□□□ -0.27
SNX12-201ENST00000276105 MAPK8IP3Q9UPT6 1336 aa13.39□□□□□ -0.27
SNX12-201ENST00000276105 BCORQ6W2J9 1755 aa13.38□□□□□ -0.27
SNX12-201ENST00000276105 PDE6BP35913 854 aa13.38□□□□□ -0.27
SNX12-201ENST00000276105 DCTN1Q14203 1278 aa13.38□□□□□ -0.27
SNX12-201ENST00000276105 TTLL6Q8N841 843 aa13.38□□□□□ -0.27
SNX12-201ENST00000276105 ZNF526Q8TF50 670 aaPredicted RBP13.38□□□□□ -0.27
SNX12-201ENST00000276105 BRIP1Q9BX63 1249 aa13.38□□□□□ -0.27
SNX12-201ENST00000276105 ZNF652Q9Y2D9 606 aa13.38□□□□□ -0.27
SNX12-201ENST00000276105 ZC3H4Q9UPT8 1303 aaKnown RBP13.38□□□□□ -0.27
SNX12-201ENST00000276105 C9orf131Q5VYM1 1079 aa13.37□□□□□ -0.27
SNX12-201ENST00000276105 BICDL1Q6ZP65 573 aa13.37□□□□□ -0.27
SNX12-201ENST00000276105 C2CD5Q86YS7 1000 aa13.37□□□□□ -0.27
SNX12-201ENST00000276105 KDM3BQ7LBC6 1761 aa13.36□□□□□ -0.27
SNX12-201ENST00000276105 KIF3CO14782 793 aa13.36□□□□□ -0.27
SNX12-201ENST00000276105 PRR5LQ6MZQ0 368 aa13.36□□□□□ -0.27
SNX12-201ENST00000276105 SBF1O95248 1867 aa13.36□□□□□ -0.27
SNX12-201ENST00000276105 LAMB4A4D0S4 1761 aa13.35□□□□□ -0.27
SNX12-201ENST00000276105 PRAMEF22A3QJZ6 481 aa13.35□□□□□ -0.27
SNX12-201ENST00000276105 HSPA6P17066 643 aa13.35□□□□□ -0.27
SNX12-201ENST00000276105 ST5P78524 1137 aa13.35□□□□□ -0.27
SNX12-201ENST00000276105 TNS4Q8IZW8 715 aa13.35□□□□□ -0.27
SNX12-201ENST00000276105 CNBD1Q8NA66 436 aa13.35□□□□□ -0.27
SNX12-201ENST00000276105 ANKRD31Q8N7Z5 1873 aa13.35□□□□□ -0.27
SNX12-201ENST00000276105 KDM2BQ8NHM5 1336 aa13.35□□□□□ -0.27
SNX12-201ENST00000276105 MYBBP1AQ9BQG0 1328 aaKnown RBP13.35□□□□□ -0.27
SNX12-201ENST00000276105 NBPF26B4DH59 902 aa13.34□□□□□ -0.27
SNX12-201ENST00000276105 NPHP1O15259 732 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms