RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 DDX21Q9NR30 783 aaKnown RBP eCLIP18.33■□□□□ 0.53
TRIM23-202ENST00000274327 C8orf37Q96NL8 207 aa18.33■□□□□ 0.52
TRIM23-202ENST00000274327 ANXA1P04083 346 aa18.32■□□□□ 0.52
TRIM23-202ENST00000274327 VPS72Q15906 364 aa18.32■□□□□ 0.52
TRIM23-202ENST00000274327 PROSER3Q2NL68 480 aa18.32■□□□□ 0.52
TRIM23-202ENST00000274327 SLC4A10Q6U841 1118 aa18.32■□□□□ 0.52
TRIM23-202ENST00000274327 SKAP1Q86WV1 359 aa18.32■□□□□ 0.52
TRIM23-202ENST00000274327 NGLY1Q96IV0 654 aa18.32■□□□□ 0.52
TRIM23-202ENST00000274327 HYPKQ9NX55 129 aa18.32■□□□□ 0.52
TRIM23-202ENST00000274327 C1orf115Q9H7X2 142 aa18.31■□□□□ 0.52
TRIM23-202ENST00000274327 TMOD3Q9NYL9 352 aa18.31■□□□□ 0.52
TRIM23-202ENST00000274327 DOT1LQ8TEK3 1739 aa18.31■□□□□ 0.52
TRIM23-202ENST00000274327 USP16Q9Y5T5 823 aa18.3■□□□□ 0.52
TRIM23-202ENST00000274327 ADCY9O60503 1353 aa18.3■□□□□ 0.52
TRIM23-202ENST00000274327 DDB1Q16531 1140 aa18.3■□□□□ 0.52
TRIM23-202ENST00000274327 MEIS3Q99687 375 aa18.3■□□□□ 0.52
TRIM23-202ENST00000274327 ATP10DQ9P241 1426 aa18.3■□□□□ 0.52
TRIM23-202ENST00000274327 SMC5Q8IY18 1101 aa18.29■□□□□ 0.52
TRIM23-202ENST00000274327 PIGBQ92521 554 aa18.29■□□□□ 0.52
TRIM23-202ENST00000274327 BCL9O00512 1426 aa18.28■□□□□ 0.52
TRIM23-202ENST00000274327 SIRT2Q8IXJ6 389 aa18.28■□□□□ 0.52
TRIM23-202ENST00000274327 CCDC9Q9Y3X0 531 aaKnown RBP18.28■□□□□ 0.52
TRIM23-202ENST00000274327 LRP10Q7Z4F1 713 aa18.28■□□□□ 0.52
TRIM23-202ENST00000274327 DNAAF4Q8WXU2 420 aa18.28■□□□□ 0.52
TRIM23-202ENST00000274327 ERBB4Q15303 1308 aa18.27■□□□□ 0.52
TRIM23-202ENST00000274327 PI4KAP2A4QPH2 592 aa18.27■□□□□ 0.52
TRIM23-202ENST00000274327 PI4KAP1Q8N8J0 262 aa18.27■□□□□ 0.52
TRIM23-202ENST00000274327 PDZRN3Q9UPQ7 1066 aa18.27■□□□□ 0.52
TRIM23-202ENST00000274327 KSR2Q6VAB6 950 aa18.26■□□□□ 0.51
TRIM23-202ENST00000274327 BEND3Q5T5X7 828 aa18.26■□□□□ 0.51
TRIM23-202ENST00000274327 RPAP2Q8IXW5 612 aaPredicted RBP18.26■□□□□ 0.51
TRIM23-202ENST00000274327 ANKRD44Q8N8A2 993 aa18.26■□□□□ 0.51
TRIM23-202ENST00000274327 MARCH10Q8NA82 808 aaPredicted RBP18.26■□□□□ 0.51
TRIM23-202ENST00000274327 ATG3Q9NT62 314 aa18.26■□□□□ 0.51
TRIM23-202ENST00000274327 CEP85Q6P2H3 762 aa18.25■□□□□ 0.51
TRIM23-202ENST00000274327 SRCIN1Q9C0H9 1055 aa18.25■□□□□ 0.51
TRIM23-202ENST00000274327 USP21Q9UK80 565 aa18.25■□□□□ 0.51
TRIM23-202ENST00000274327 GNAI3P08754 354 aa18.24■□□□□ 0.51
TRIM23-202ENST00000274327 ASAP1Q9ULH1 1129 aa18.24■□□□□ 0.51
TRIM23-202ENST00000274327 THSD7AQ9UPZ6 1657 aa18.24■□□□□ 0.51
TRIM23-202ENST00000274327 KAT6BQ8WYB5 2073 aa18.24■□□□□ 0.51
TRIM23-202ENST00000274327 DDX58O95786 925 aaKnown RBP18.23■□□□□ 0.51
TRIM23-202ENST00000274327 VSIG10Q8N0Z9 540 aa18.23■□□□□ 0.51
TRIM23-202ENST00000274327 MAP3K2Q9Y2U5 619 aa18.23■□□□□ 0.51
TRIM23-202ENST00000274327 PTCD1O75127 700 aaKnown RBP18.23■□□□□ 0.51
TRIM23-202ENST00000274327 MYL6BP14649 208 aa18.23■□□□□ 0.51
TRIM23-202ENST00000274327 GCC1Q96CN9 775 aa18.23■□□□□ 0.51
TRIM23-202ENST00000274327 USP44Q9H0E7 712 aa18.23■□□□□ 0.51
TRIM23-202ENST00000274327 GNAI2P04899 355 aa18.22■□□□□ 0.51
TRIM23-202ENST00000274327 FAM98CQ17RN3 349 aaKnown RBP18.22■□□□□ 0.51
TRIM23-202ENST00000274327 XAGE3Q8WTP9 111 aa18.22■□□□□ 0.51
TRIM23-202ENST00000274327 IBTKQ9P2D0 1353 aaPredicted RBP18.22■□□□□ 0.51
TRIM23-202ENST00000274327 ALDH1L1O75891 902 aa18.21■□□□□ 0.51
TRIM23-202ENST00000274327 RGS3P49796 1198 aa18.21■□□□□ 0.51
TRIM23-202ENST00000274327 COPS6Q7L5N1 327 aa18.21■□□□□ 0.51
TRIM23-202ENST00000274327 ARFGEF2Q9Y6D5 1785 aa18.21■□□□□ 0.51
TRIM23-202ENST00000274327 NBPF26B4DH59 902 aa18.21■□□□□ 0.51
TRIM23-202ENST00000274327 PRIM1P49642 420 aaKnown RBP18.21■□□□□ 0.51
TRIM23-202ENST00000274327 AIMP1Q12904 312 aaKnown RBP18.21■□□□□ 0.51
TRIM23-202ENST00000274327 NBPF14Q5TI25 921 aa18.21■□□□□ 0.51
TRIM23-202ENST00000274327 MEX3CQ5U5Q3 659 aaKnown RBP18.21■□□□□ 0.51
TRIM23-202ENST00000274327 NBPF10Q6P3W6 841 aaKnown RBP18.21■□□□□ 0.51
TRIM23-202ENST00000274327 NBPF15Q8N660 670 aa18.21■□□□□ 0.51
TRIM23-202ENST00000274327 NUCB1Q02818 461 aa18.2■□□□□ 0.5
TRIM23-202ENST00000274327 TEX13AQ9BXU3 409 aaPredicted RBP18.2■□□□□ 0.5
TRIM23-202ENST00000274327 PIP4K2AP48426 406 aaPredicted RBP18.19■□□□□ 0.5
TRIM23-202ENST00000274327 DCTPP1Q9H773 170 aa18.19■□□□□ 0.5
TRIM23-202ENST00000274327 TJP1Q07157 1748 aa18.19■□□□□ 0.5
TRIM23-202ENST00000274327 AFF2P51816 1311 aa18.19■□□□□ 0.5
TRIM23-202ENST00000274327 ATRNO75882 1429 aa18.19■□□□□ 0.5
TRIM23-202ENST00000274327 NUP188Q5SRE5 1749 aa18.19■□□□□ 0.5
TRIM23-202ENST00000274327 UBTFL1P0CB47 393 aaPredicted RBP18.18■□□□□ 0.5
TRIM23-202ENST00000274327 RIC3Q7Z5B4 369 aa18.18■□□□□ 0.5
TRIM23-202ENST00000274327 LINS1Q8NG48 757 aa18.18■□□□□ 0.5
TRIM23-202ENST00000274327 A1BGP04217 495 aa18.17■□□□□ 0.5
TRIM23-202ENST00000274327 PDE4AP27815 886 aa18.17■□□□□ 0.5
TRIM23-202ENST00000274327 ANKRD13DQ6ZTN6 518 aa18.17■□□□□ 0.5
TRIM23-202ENST00000274327 DNAJC10Q8IXB1 793 aa18.17■□□□□ 0.5
TRIM23-202ENST00000274327 SYTL4Q96C24 671 aaPredicted RBP18.17■□□□□ 0.5
TRIM23-202ENST00000274327 SLC4A9Q96Q91 983 aa18.17■□□□□ 0.5
TRIM23-202ENST00000274327 CICQ96RK0 1608 aaPredicted RBP18.17■□□□□ 0.5
TRIM23-202ENST00000274327 METTL22Q9BUU2 404 aaPredicted RBP18.17■□□□□ 0.5
TRIM23-202ENST00000274327 ATP8B2P98198 1209 aa18.16■□□□□ 0.5
TRIM23-202ENST00000274327 LRRFIP2Q9Y608 721 aaKnown RBP18.16■□□□□ 0.5
TRIM23-202ENST00000274327 HMMRO75330 724 aa18.16■□□□□ 0.5
TRIM23-202ENST00000274327 CHD1LQ86WJ1 897 aa18.16■□□□□ 0.5
TRIM23-202ENST00000274327 GJD4Q96KN9 370 aaPredicted RBP18.16■□□□□ 0.5
TRIM23-202ENST00000274327 RBM42Q9BTD8 480 aaKnown RBP18.16■□□□□ 0.5
TRIM23-202ENST00000274327 AFDNP55196 1824 aaKnown RBP18.15■□□□□ 0.5
TRIM23-202ENST00000274327 UTYO14607 1347 aa18.15■□□□□ 0.5
TRIM23-202ENST00000274327 IGKV5-2P06315 115 aa18.15■□□□□ 0.5
TRIM23-202ENST00000274327 NBPF7P0C2Y1 421 aaPredicted RBP18.15■□□□□ 0.5
TRIM23-202ENST00000274327 PLBD2Q8NHP8 589 aa18.15■□□□□ 0.5
TRIM23-202ENST00000274327 ACSBG1Q96GR2 724 aa18.15■□□□□ 0.5
TRIM23-202ENST00000274327 BACH2Q9BYV9 841 aa18.15■□□□□ 0.5
TRIM23-202ENST00000274327 CWF19L2Q2TBE0 894 aaKnown RBP18.14■□□□□ 0.5
TRIM23-202ENST00000274327 TRPC5Q9UL62 973 aaPredicted RBP18.14■□□□□ 0.49
TRIM23-202ENST00000274327 NEURL1BA8MQ27 555 aa18.13■□□□□ 0.49
TRIM23-202ENST00000274327 ONECUT3O60422 494 aaPredicted RBP18.13■□□□□ 0.49
TRIM23-202ENST00000274327 STARD3NLO95772 234 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms