RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 ECHDC1Q9NTX5 307 aa17.42■□□□□ 0.38
CNOT9-201ENST00000273064 USP19O94966 1318 aa17.42■□□□□ 0.38
CNOT9-201ENST00000273064 LARP1Q6PKG0 1096 aaKnown RBP17.42■□□□□ 0.38
CNOT9-201ENST00000273064 CCDC82Q8N4S0 544 aa17.42■□□□□ 0.38
CNOT9-201ENST00000273064 USP26Q9BXU7 913 aa17.42■□□□□ 0.38
CNOT9-201ENST00000273064 NRDCO43847 1150 aa17.42■□□□□ 0.38
CNOT9-201ENST00000273064 HAND2P61296 217 aa17.42■□□□□ 0.38
CNOT9-201ENST00000273064 CCT2P78371 535 aaKnown RBP17.42■□□□□ 0.38
CNOT9-201ENST00000273064 SASS6Q6UVJ0 657 aa17.42■□□□□ 0.38
CNOT9-201ENST00000273064 CEP126Q9P2H0 1117 aa17.42■□□□□ 0.38
CNOT9-201ENST00000273064 TRPM2O94759 1503 aa17.41■□□□□ 0.38
CNOT9-201ENST00000273064 IDH1O75874 414 aaKnown RBP17.41■□□□□ 0.38
CNOT9-201ENST00000273064 BICDL1Q6ZP65 573 aa17.41■□□□□ 0.38
CNOT9-201ENST00000273064 SBNO2Q9Y2G9 1366 aa17.41■□□□□ 0.38
CNOT9-201ENST00000273064 VSIG10Q8N0Z9 540 aa17.41■□□□□ 0.38
CNOT9-201ENST00000273064 PES1O00541 588 aaKnown RBP17.4■□□□□ 0.38
CNOT9-201ENST00000273064 RAD21O60216 631 aa17.4■□□□□ 0.38
CNOT9-201ENST00000273064 ADAMTS2O95450 1211 aa17.4■□□□□ 0.38
CNOT9-201ENST00000273064 CKAP2LQ8IYA6 745 aa17.4■□□□□ 0.38
CNOT9-201ENST00000273064 TRIM5Q9C035 493 aa17.4■□□□□ 0.38
CNOT9-201ENST00000273064 AMOTQ4VCS5 1084 aa17.4■□□□□ 0.38
CNOT9-201ENST00000273064 GOLIM4O00461 696 aa17.4■□□□□ 0.38
CNOT9-201ENST00000273064 CLTCL1P53675 1640 aa17.39■□□□□ 0.37
CNOT9-201ENST00000273064 TTC39AQ5SRH9 613 aa17.39■□□□□ 0.37
CNOT9-201ENST00000273064 KDM5AP29375 1690 aaKnown RBP17.39■□□□□ 0.37
CNOT9-201ENST00000273064 ANKRD13DQ6ZTN6 518 aa17.39■□□□□ 0.37
CNOT9-201ENST00000273064 TRPM1Q7Z4N2 1603 aa17.39■□□□□ 0.37
CNOT9-201ENST00000273064 ZFYVE16Q7Z3T8 1539 aa17.39■□□□□ 0.37
CNOT9-201ENST00000273064 CCDC73Q6ZRK6 1079 aa17.38■□□□□ 0.37
CNOT9-201ENST00000273064 PIK3R4Q99570 1358 aa17.38■□□□□ 0.37
CNOT9-201ENST00000273064 HSP90AB3PQ58FF7 597 aa17.38■□□□□ 0.37
CNOT9-201ENST00000273064 TTC21AQ8NDW8 1320 aa17.38■□□□□ 0.37
CNOT9-201ENST00000273064 PIBF1Q8WXW3 757 aa17.38■□□□□ 0.37
CNOT9-201ENST00000273064 EDC3Q96F86 508 aaKnown RBP17.38■□□□□ 0.37
CNOT9-201ENST00000273064 USP25Q9UHP3 1055 aa17.38■□□□□ 0.37
CNOT9-201ENST00000273064 EDC4Q6P2E9 1401 aaKnown RBP17.38■□□□□ 0.37
CNOT9-201ENST00000273064 FAM173BQ6P4H8 233 aa17.37■□□□□ 0.37
CNOT9-201ENST00000273064 SYNE3Q6ZMZ3 975 aa17.37■□□□□ 0.37
CNOT9-201ENST00000273064 ME1P48163 572 aa17.37■□□□□ 0.37
CNOT9-201ENST00000273064 CHST3Q7LGC8 479 aa17.37■□□□□ 0.37
CNOT9-201ENST00000273064 SETD1BQ9UPS6 1966 aaKnown RBP17.37■□□□□ 0.37
CNOT9-201ENST00000273064 PRAMEF22A3QJZ6 481 aa17.37■□□□□ 0.37
CNOT9-201ENST00000273064 CHMLP26374 656 aa17.37■□□□□ 0.37
CNOT9-201ENST00000273064 ZNF830Q96NB3 372 aaPredicted RBP17.37■□□□□ 0.37
CNOT9-201ENST00000273064 CPLX2Q6PUV4 134 aaKnown RBP17.37■□□□□ 0.37
CNOT9-201ENST00000273064 LMBR1LQ6UX01 489 aa17.37■□□□□ 0.37
CNOT9-201ENST00000273064 LIMCH1Q9UPQ0 1083 aa17.37■□□□□ 0.37
CNOT9-201ENST00000273064 CCDC158Q5M9N0 1113 aa17.36■□□□□ 0.37
CNOT9-201ENST00000273064 KIF6Q6ZMV9 814 aa17.36■□□□□ 0.37
CNOT9-201ENST00000273064 ROBO2Q9HCK4 1378 aa17.36■□□□□ 0.37
CNOT9-201ENST00000273064 CCDC173Q0VFZ6 552 aa17.36■□□□□ 0.37
CNOT9-201ENST00000273064 TBX22Q9Y458 520 aa17.36■□□□□ 0.37
CNOT9-201ENST00000273064 GRM8O00222 908 aa17.36■□□□□ 0.37
CNOT9-201ENST00000273064 GJB2P29033 226 aa17.36■□□□□ 0.37
CNOT9-201ENST00000273064 PIP4K2BP78356 416 aa17.36■□□□□ 0.37
CNOT9-201ENST00000273064 KRT85P78386 507 aa17.36■□□□□ 0.37
CNOT9-201ENST00000273064 HYPKQ9NX55 129 aa17.36■□□□□ 0.37
CNOT9-201ENST00000273064 CNPY2Q9Y2B0 182 aa17.36■□□□□ 0.37
CNOT9-201ENST00000273064 PRIM1P49642 420 aaKnown RBP17.35■□□□□ 0.37
CNOT9-201ENST00000273064 AKAP17AQ02040 695 aaKnown RBP17.35■□□□□ 0.37
CNOT9-201ENST00000273064 SPATA32Q96LK8 384 aa17.35■□□□□ 0.37
CNOT9-201ENST00000273064 PALD1Q9ULE6 856 aa17.35■□□□□ 0.37
CNOT9-201ENST00000273064 ADCY10Q96PN6 1610 aa17.35■□□□□ 0.37
CNOT9-201ENST00000273064 GIMAP6Q6P9H5 292 aa17.35■□□□□ 0.37
CNOT9-201ENST00000273064 USP44Q9H0E7 712 aa17.35■□□□□ 0.37
CNOT9-201ENST00000273064 ZFYVE9O95405 1425 aa17.35■□□□□ 0.37
CNOT9-201ENST00000273064 RBM25P49756 843 aaKnown RBP17.34■□□□□ 0.37
CNOT9-201ENST00000273064 UNC5CLQ8IV45 518 aa17.34■□□□□ 0.37
CNOT9-201ENST00000273064 IFIT1P09914 478 aaKnown RBP17.34■□□□□ 0.37
CNOT9-201ENST00000273064 TRIM29Q14134 588 aa17.34■□□□□ 0.37
CNOT9-201ENST00000273064 ZSCAN23Q3MJ62 389 aa17.34■□□□□ 0.37
CNOT9-201ENST00000273064 IFNL2Q8IZJ0 200 aa17.34■□□□□ 0.37
CNOT9-201ENST00000273064 PDCP20941 246 aa17.34■□□□□ 0.37
CNOT9-201ENST00000273064 RAB3GAP1Q15042 981 aa17.34■□□□□ 0.37
CNOT9-201ENST00000273064 CCAR2Q8N163 923 aaKnown RBP17.34■□□□□ 0.37
CNOT9-201ENST00000273064 TNMDQ9H2S6 317 aa17.34■□□□□ 0.37
CNOT9-201ENST00000273064 ABCF2Q9UG63 623 aa17.34■□□□□ 0.37
CNOT9-201ENST00000273064 HCLS1P14317 486 aaPredicted RBP17.33■□□□□ 0.37
CNOT9-201ENST00000273064 SNX21Q969T3 373 aa17.33■□□□□ 0.37
CNOT9-201ENST00000273064 KSR2Q6VAB6 950 aa17.33■□□□□ 0.36
CNOT9-201ENST00000273064 BICC1Q9H694 974 aaKnown RBP17.33■□□□□ 0.36
CNOT9-201ENST00000273064 METTL24Q5JXM2 366 aa17.33■□□□□ 0.36
CNOT9-201ENST00000273064 IQSEC3Q9UPP2 1182 aaPredicted RBP17.33■□□□□ 0.36
CNOT9-201ENST00000273064 RBM8AQ9Y5S9 174 aaKnown RBP17.33■□□□□ 0.36
CNOT9-201ENST00000273064 TMEM2Q9UHN6 1383 aa17.33■□□□□ 0.36
CNOT9-201ENST00000273064 HIP1O00291 1037 aa17.32■□□□□ 0.36
CNOT9-201ENST00000273064 STX6O43752 255 aa17.32■□□□□ 0.36
CNOT9-201ENST00000273064 CCDC144CPQ8IYA2 1237 aa17.32■□□□□ 0.36
CNOT9-201ENST00000273064 TIMM10P62072 90 aa17.32■□□□□ 0.36
CNOT9-201ENST00000273064 LRRFIP1Q32MZ4 808 aaKnown RBP17.32■□□□□ 0.36
CNOT9-201ENST00000273064 AKAP4Q5JQC9 854 aa17.32■□□□□ 0.36
CNOT9-201ENST00000273064 IP6K1Q92551 441 aa17.32■□□□□ 0.36
CNOT9-201ENST00000273064 TSPOAP1O95153 1857 aa17.32■□□□□ 0.36
CNOT9-201ENST00000273064 MAP3K5Q99683 1374 aa17.32■□□□□ 0.36
CNOT9-201ENST00000273064 FILIP1Q7Z7B0 1213 aa17.32■□□□□ 0.36
CNOT9-201ENST00000273064 AK2P54819 239 aa17.32■□□□□ 0.36
CNOT9-201ENST00000273064 PROSER3Q2NL68 480 aa17.32■□□□□ 0.36
CNOT9-201ENST00000273064 ABCC4O15439 1325 aa17.31■□□□□ 0.36
CNOT9-201ENST00000273064 SYNMO15061 1565 aa17.31■□□□□ 0.36
CNOT9-201ENST00000273064 PLEKHG3A1L390 1219 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms