RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 FAM160A1Q05DH4 1040 aa18.16■□□□□ 0.5
UBR3-201ENST00000272793 TACC3Q9Y6A5 838 aa18.16■□□□□ 0.5
UBR3-201ENST00000272793 TRMT1LQ7Z2T5 733 aaKnown RBP18.16■□□□□ 0.5
UBR3-201ENST00000272793 KIAA0753Q2KHM9 967 aa18.16■□□□□ 0.5
UBR3-201ENST00000272793 CCDC83Q8IWF9 413 aa18.16■□□□□ 0.5
UBR3-201ENST00000272793 CCT6BQ92526 530 aa18.16■□□□□ 0.5
UBR3-201ENST00000272793 ZC4H2Q9NQZ6 224 aa18.16■□□□□ 0.5
UBR3-201ENST00000272793 TTC31Q49AM3 519 aaPredicted RBP18.15■□□□□ 0.5
UBR3-201ENST00000272793 ANKFY1Q9P2R3 1169 aa18.15■□□□□ 0.5
UBR3-201ENST00000272793 MINK1Q8N4C8 1332 aaPredicted RBP18.15■□□□□ 0.5
UBR3-201ENST00000272793 FKBP4Q02790 459 aaKnown RBP eCLIP18.15■□□□□ 0.5
UBR3-201ENST00000272793 CUL4BQ13620 913 aa18.15■□□□□ 0.5
UBR3-201ENST00000272793 RSRC1Q96IZ7 334 aaKnown RBP18.15■□□□□ 0.5
UBR3-201ENST00000272793 TSPYL2Q9H2G4 693 aaPredicted RBP18.15■□□□□ 0.5
UBR3-201ENST00000272793 PSMD6Q15008 389 aa18.15■□□□□ 0.5
UBR3-201ENST00000272793 DDX12PQ92771 950 aa18.15■□□□□ 0.5
UBR3-201ENST00000272793 KIF2AO00139 706 aaPredicted RBP18.15■□□□□ 0.5
UBR3-201ENST00000272793 TXNDC16Q9P2K2 825 aa18.14■□□□□ 0.5
UBR3-201ENST00000272793 STMN2Q93045 179 aa18.14■□□□□ 0.49
UBR3-201ENST00000272793 WDR33Q9C0J8 1336 aaKnown RBP18.14■□□□□ 0.49
UBR3-201ENST00000272793 WRNQ14191 1432 aaPredicted RBP eCLIP18.14■□□□□ 0.49
UBR3-201ENST00000272793 RSPH14Q9UHP6 348 aa18.14■□□□□ 0.49
UBR3-201ENST00000272793 GSTA5Q7RTV2 222 aa18.14■□□□□ 0.49
UBR3-201ENST00000272793 UBAC1Q9BSL1 405 aa18.14■□□□□ 0.49
UBR3-201ENST00000272793 TRIM7Q9C029 511 aa18.14■□□□□ 0.49
UBR3-201ENST00000272793 MAFGO15525 162 aa18.13■□□□□ 0.49
UBR3-201ENST00000272793 ATRIPQ8WXE1 791 aa18.13■□□□□ 0.49
UBR3-201ENST00000272793 C16orf45Q96MC5 204 aaPredicted RBP18.13■□□□□ 0.49
UBR3-201ENST00000272793 MMRN2Q9H8L6 949 aa18.13■□□□□ 0.49
UBR3-201ENST00000272793 CETN1Q12798 172 aa18.13■□□□□ 0.49
UBR3-201ENST00000272793 VPS52Q8N1B4 723 aa18.13■□□□□ 0.49
UBR3-201ENST00000272793 HAUS7Q99871 368 aa18.13■□□□□ 0.49
UBR3-201ENST00000272793 CCDC14Q49A88 953 aa18.12■□□□□ 0.49
UBR3-201ENST00000272793 SYCP3Q8IZU3 236 aa18.12■□□□□ 0.49
UBR3-201ENST00000272793 HNRNPMP52272 730 aaKnown RBP eCLIP18.12■□□□□ 0.496e-7■■■■■ 33.7
UBR3-201ENST00000272793 PDZRN3Q9UPQ7 1066 aa18.12■□□□□ 0.49
UBR3-201ENST00000272793 PPME1Q9Y570 386 aa18.12■□□□□ 0.49
UBR3-201ENST00000272793 K7ELQ4 463 aaPredicted RBP18.12■□□□□ 0.49
UBR3-201ENST00000272793 CPLX3Q8WVH0 158 aa18.12■□□□□ 0.49
UBR3-201ENST00000272793 SPINK5Q9NQ38 1064 aaPredicted RBP18.12■□□□□ 0.49
UBR3-201ENST00000272793 INPP1P49441 399 aa18.12■□□□□ 0.49
UBR3-201ENST00000272793 GSDMBQ8TAX9 411 aa18.12■□□□□ 0.49
UBR3-201ENST00000272793 MAP3K11Q16584 847 aa18.11■□□□□ 0.49
UBR3-201ENST00000272793 CCDC110Q8TBZ0 833 aa18.11■□□□□ 0.49
UBR3-201ENST00000272793 VCX3BQ9H321 246 aa18.11■□□□□ 0.49
UBR3-201ENST00000272793 ATP11AP98196 1134 aa18.11■□□□□ 0.49
UBR3-201ENST00000272793 SIRT1Q96EB6 747 aa18.11■□□□□ 0.49
UBR3-201ENST00000272793 NAA16Q6N069 864 aaPredicted RBP18.11■□□□□ 0.49
UBR3-201ENST00000272793 SELENOSQ9BQE4 189 aa18.11■□□□□ 0.49
UBR3-201ENST00000272793 PPP1R12CQ9BZL4 782 aa18.11■□□□□ 0.49
UBR3-201ENST00000272793 CCDC121Q6ZUS5 278 aa18.11■□□□□ 0.49
UBR3-201ENST00000272793 ZSCAN30Q86W11 494 aa18.11■□□□□ 0.49
UBR3-201ENST00000272793 ATICP31939 592 aa18.11■□□□□ 0.49
UBR3-201ENST00000272793 SIL1Q9H173 461 aa18.11■□□□□ 0.49
UBR3-201ENST00000272793 RUNDC1Q96C34 613 aa18.1■□□□□ 0.49
UBR3-201ENST00000272793 SEC62Q99442 399 aaKnown RBP18.1■□□□□ 0.49
UBR3-201ENST00000272793 SF3B2Q13435 895 aaKnown RBP18.1■□□□□ 0.49
UBR3-201ENST00000272793 CEP85LQ5SZL2 805 aa18.1■□□□□ 0.49
UBR3-201ENST00000272793 CXorf38Q8TB03 319 aa18.1■□□□□ 0.49
UBR3-201ENST00000272793 ZSWIM4Q9H7M6 989 aa18.1■□□□□ 0.49
UBR3-201ENST00000272793 C11orf95C9JLR9 678 aaPredicted RBP18.1■□□□□ 0.49
UBR3-201ENST00000272793 TCERG1LQ5VWI1 586 aa18.1■□□□□ 0.49
UBR3-201ENST00000272793 GBP6Q6ZN66 633 aa18.1■□□□□ 0.49
UBR3-201ENST00000272793 XAB2Q9HCS7 855 aaKnown RBP18.1■□□□□ 0.49
UBR3-201ENST00000272793 POTEB2H3BUK9 544 aa18.09■□□□□ 0.49
UBR3-201ENST00000272793 RNF168Q8IYW5 571 aaPredicted RBP18.09■□□□□ 0.49
UBR3-201ENST00000272793 CACYBPQ9HB71 228 aaKnown RBP18.09■□□□□ 0.49
UBR3-201ENST00000272793 MYO1BO43795 1136 aa18.09■□□□□ 0.49
UBR3-201ENST00000272793 WDHD1O75717 1129 aaPredicted RBP18.09■□□□□ 0.49
UBR3-201ENST00000272793 WASHC2CQ9Y4E1 1318 aa18.09■□□□□ 0.49
UBR3-201ENST00000272793 IVLP07476 585 aa18.09■□□□□ 0.49
UBR3-201ENST00000272793 TTLL12Q14166 644 aaPredicted RBP18.09■□□□□ 0.49
UBR3-201ENST00000272793 PCK1P35558 622 aa18.08■□□□□ 0.49
UBR3-201ENST00000272793 STAC3Q96MF2 364 aa18.08■□□□□ 0.49
UBR3-201ENST00000272793 DNAJC21Q5F1R6 531 aaKnown RBP18.08■□□□□ 0.49
UBR3-201ENST00000272793 CCDC65Q8IXS2 484 aa18.08■□□□□ 0.49
UBR3-201ENST00000272793 SMIM23A6NLE4 172 aa18.08■□□□□ 0.48
UBR3-201ENST00000272793 CIB2O75838 187 aa18.08■□□□□ 0.48
UBR3-201ENST00000272793 MAP3K7CLP57077 242 aa18.08■□□□□ 0.48
UBR3-201ENST00000272793 PPFIBP2Q8ND30 876 aa18.08■□□□□ 0.48
UBR3-201ENST00000272793 LUC7L2Q9Y383 392 aaKnown RBP18.08■□□□□ 0.48
UBR3-201ENST00000272793 MICAL3Q7RTP6 2002 aa18.08■□□□□ 0.48
UBR3-201ENST00000272793 BAG1Q99933 345 aaPredicted RBP18.07■□□□□ 0.48
UBR3-201ENST00000272793 EVC2Q86UK5 1308 aa18.07■□□□□ 0.48
UBR3-201ENST00000272793 RAD54L2Q9Y4B4 1467 aa18.07■□□□□ 0.48
UBR3-201ENST00000272793 GAS8O95995 478 aa18.07■□□□□ 0.48
UBR3-201ENST00000272793 KRT13P13646 458 aa18.07■□□□□ 0.48
UBR3-201ENST00000272793 MPHOSPH8Q99549 860 aa18.07■□□□□ 0.48
UBR3-201ENST00000272793 MAP7Q14244 749 aa18.07■□□□□ 0.48
UBR3-201ENST00000272793 RUFY3Q7L099 469 aa18.07■□□□□ 0.48
UBR3-201ENST00000272793 RAPGEF4Q8WZA2 1011 aa18.07■□□□□ 0.48
UBR3-201ENST00000272793 SETD1BQ9UPS6 1966 aaKnown RBP18.07■□□□□ 0.48
UBR3-201ENST00000272793 YEATS4O95619 227 aa18.06■□□□□ 0.48
UBR3-201ENST00000272793 CLIP2Q9UDT6 1046 aa18.06■□□□□ 0.48
UBR3-201ENST00000272793 MCM6Q14566 821 aa18.06■□□□□ 0.48
UBR3-201ENST00000272793 SH2D4BQ5SQS7 431 aa18.06■□□□□ 0.48
UBR3-201ENST00000272793 MTIF2P46199 727 aaKnown RBP18.06■□□□□ 0.48
UBR3-201ENST00000272793 NUTM2GQ5VZR2 741 aa18.06■□□□□ 0.48
UBR3-201ENST00000272793 PLVAPQ9BX97 442 aa18.06■□□□□ 0.48
UBR3-201ENST00000272793 AEBP2Q6ZN18 517 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms