RNA–Protein interactions for RNA: ENST00000269834.1

ZIM3-201, Transcript of zinc finger imprinted 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIM3, Length 2,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3-201ENST00000269834 PPP1R3GB7ZBB8 358 aa9.78□□□□□ -0.84
ZIM3-201ENST00000269834 CTDSPL2Q05D32 466 aa9.78□□□□□ -0.84
ZIM3-201ENST00000269834 RSBN1LQ6PCB5 846 aaPredicted RBP9.78□□□□□ -0.84
ZIM3-201ENST00000269834 SKAP1Q86WV1 359 aa9.78□□□□□ -0.84
ZIM3-201ENST00000269834 SLFNL1Q499Z3 407 aa9.77□□□□□ -0.85
ZIM3-201ENST00000269834 DNAJA1P31689 397 aaKnown RBP9.77□□□□□ -0.85
ZIM3-201ENST00000269834 PLCD4Q9BRC7 762 aa9.77□□□□□ -0.85
ZIM3-201ENST00000269834 CAPN10Q9HC96 672 aa9.77□□□□□ -0.85
ZIM3-201ENST00000269834 MRPL42Q9Y6G3 142 aaKnown RBP9.77□□□□□ -0.85
ZIM3-201ENST00000269834 ADGRB2O60241 1585 aa9.77□□□□□ -0.85
ZIM3-201ENST00000269834 NUTM2BA6NNL0 878 aaPredicted RBP9.76□□□□□ -0.85
ZIM3-201ENST00000269834 NUTM2EB1AL46 878 aaPredicted RBP9.76□□□□□ -0.85
ZIM3-201ENST00000269834 H3BRB1 525 aa9.76□□□□□ -0.85
ZIM3-201ENST00000269834 LILRB3O75022 631 aa9.76□□□□□ -0.85
ZIM3-201ENST00000269834 NUTM2DQ5VT03 806 aaPredicted RBP9.76□□□□□ -0.85
ZIM3-201ENST00000269834 NUTM2AQ8IVF1 878 aaPredicted RBP9.76□□□□□ -0.85
ZIM3-201ENST00000269834 MORC4Q8TE76 937 aa9.76□□□□□ -0.85
ZIM3-201ENST00000269834 LRRN4Q8WUT4 740 aa9.76□□□□□ -0.85
ZIM3-201ENST00000269834 L3MBTL3Q96JM7 780 aaPredicted RBP9.76□□□□□ -0.85
ZIM3-201ENST00000269834 TUT1Q9H6E5 874 aaKnown RBP9.76□□□□□ -0.85
ZIM3-201ENST00000269834 ATP9BO43861 1147 aa9.76□□□□□ -0.85
ZIM3-201ENST00000269834 MAPK1P28482 360 aa9.75□□□□□ -0.85
ZIM3-201ENST00000269834 METTL16Q86W50 562 aaKnown RBP9.75□□□□□ -0.85
ZIM3-201ENST00000269834 ACBD3Q9H3P7 528 aa9.75□□□□□ -0.85
ZIM3-201ENST00000269834 CFAP74Q9C0B2 1584 aa9.75□□□□□ -0.85
ZIM3-201ENST00000269834 APAF1O14727 1248 aa9.75□□□□□ -0.85
ZIM3-201ENST00000269834 PAX3P23760 479 aa9.75□□□□□ -0.85
ZIM3-201ENST00000269834 MTMR3Q13615 1198 aa9.75□□□□□ -0.85
ZIM3-201ENST00000269834 CENPJQ9HC77 1338 aaPredicted RBP9.74□□□□□ -0.85
ZIM3-201ENST00000269834 TSPOAP1O95153 1857 aa9.74□□□□□ -0.85
ZIM3-201ENST00000269834 KIDINS220Q9ULH0 1771 aa9.74□□□□□ -0.85
ZIM3-201ENST00000269834 UGGT1Q9NYU2 1555 aa9.74□□□□□ -0.85
ZIM3-201ENST00000269834 PPFIA4O75335 1185 aa9.74□□□□□ -0.85
ZIM3-201ENST00000269834 BMS1Q14692 1282 aaKnown RBP9.74□□□□□ -0.85
ZIM3-201ENST00000269834 TMTC2Q8N394 836 aa9.74□□□□□ -0.85
ZIM3-201ENST00000269834 RBM33Q96EV2 1170 aaKnown RBP9.74□□□□□ -0.85
ZIM3-201ENST00000269834 SPOCK3Q9BQ16 436 aa9.74□□□□□ -0.85
ZIM3-201ENST00000269834 METTL14Q9HCE5 456 aaKnown RBP9.74□□□□□ -0.85
ZIM3-201ENST00000269834 USP19O94966 1318 aa9.74□□□□□ -0.85
ZIM3-201ENST00000269834 ADGRB1O14514 1584 aa9.74□□□□□ -0.85
ZIM3-201ENST00000269834 U2SURPO15042 1029 aaKnown RBP9.73□□□□□ -0.85
ZIM3-201ENST00000269834 ATP2B1P20020 1258 aa9.73□□□□□ -0.85
ZIM3-201ENST00000269834 MRPL58Q14197 206 aaKnown RBP9.73□□□□□ -0.85
ZIM3-201ENST00000269834 NAP1L5Q96NT1 182 aaPredicted RBP9.73□□□□□ -0.85
ZIM3-201ENST00000269834 ANKRD26Q9UPS8 1709 aa9.73□□□□□ -0.85
ZIM3-201ENST00000269834 SPTLC1O15269 473 aa9.73□□□□□ -0.85
ZIM3-201ENST00000269834 CCDC146Q8IYE0 955 aa9.73□□□□□ -0.85
ZIM3-201ENST00000269834 FRAT1Q92837 279 aaPredicted RBP9.73□□□□□ -0.85
ZIM3-201ENST00000269834 SCAMP3O14828 347 aaKnown RBP9.72□□□□□ -0.85
ZIM3-201ENST00000269834 ATP2B4P23634 1241 aa9.72□□□□□ -0.85
ZIM3-201ENST00000269834 RGS3P49796 1198 aa9.72□□□□□ -0.85
ZIM3-201ENST00000269834 BECN1Q14457 450 aa9.72□□□□□ -0.85
ZIM3-201ENST00000269834 DPY19L2Q6NUT2 758 aa9.72□□□□□ -0.85
ZIM3-201ENST00000269834 CUEDC1Q9NWM3 386 aaPredicted RBP9.72□□□□□ -0.85
ZIM3-201ENST00000269834 TERF2IPQ9NYB0 399 aa9.72□□□□□ -0.85
ZIM3-201ENST00000269834 ZNF518AQ6AHZ1 1483 aa9.72□□□□□ -0.85
ZIM3-201ENST00000269834 ARHGEF28Q8N1W1 1705 aaKnown RBP9.72□□□□□ -0.85
ZIM3-201ENST00000269834 BCAR3O75815 825 aa9.72□□□□□ -0.85
ZIM3-201ENST00000269834 PTGER2P43116 358 aa9.72□□□□□ -0.85
ZIM3-201ENST00000269834 SEMA3FQ13275 785 aa9.72□□□□□ -0.85
ZIM3-201ENST00000269834 PRR12Q9ULL5 1215 aa9.72□□□□□ -0.85
ZIM3-201ENST00000269834 NSD2O96028 1365 aa9.71□□□□□ -0.85
ZIM3-201ENST00000269834 CREB3O43889 395 aa9.71□□□□□ -0.85
ZIM3-201ENST00000269834 ELOAQ14241 798 aaKnown RBP9.71□□□□□ -0.85
ZIM3-201ENST00000269834 MAFGO15525 162 aa9.71□□□□□ -0.86
ZIM3-201ENST00000269834 LGR5O75473 907 aa9.71□□□□□ -0.86
ZIM3-201ENST00000269834 SLC4A3P48751 1232 aa9.71□□□□□ -0.86
ZIM3-201ENST00000269834 PPP1R18Q6NYC8 613 aa9.71□□□□□ -0.86
ZIM3-201ENST00000269834 RPUSD2Q8IZ73 545 aaKnown RBP9.71□□□□□ -0.86
ZIM3-201ENST00000269834 PXYLP1Q8TE99 480 aa9.71□□□□□ -0.86
ZIM3-201ENST00000269834 STAG1Q8WVM7 1258 aa9.71□□□□□ -0.86
ZIM3-201ENST00000269834 TSC1Q92574 1164 aa9.71□□□□□ -0.86
ZIM3-201ENST00000269834 CARD14Q9BXL6 1004 aa9.71□□□□□ -0.86
ZIM3-201ENST00000269834 NSD3Q9BZ95 1437 aa9.71□□□□□ -0.86
ZIM3-201ENST00000269834 MAP3K7O43318 606 aa9.7□□□□□ -0.86
ZIM3-201ENST00000269834 IGHDP01880 384 aa9.7□□□□□ -0.86
ZIM3-201ENST00000269834 PDE6BP35913 854 aa9.7□□□□□ -0.86
ZIM3-201ENST00000269834 TMC2Q8TDI7 906 aa9.7□□□□□ -0.86
ZIM3-201ENST00000269834 PIK3C2BO00750 1634 aa9.7□□□□□ -0.86
ZIM3-201ENST00000269834 C2orf72A6NCS6 295 aa9.7□□□□□ -0.86
ZIM3-201ENST00000269834 WDR63Q8IWG1 891 aa9.7□□□□□ -0.86
ZIM3-201ENST00000269834 PNMA2Q9UL42 364 aa9.7□□□□□ -0.86
ZIM3-201ENST00000269834 FRAT2O75474 233 aaPredicted RBP9.69□□□□□ -0.86
ZIM3-201ENST00000269834 CNPY4Q8N129 248 aa9.69□□□□□ -0.86
ZIM3-201ENST00000269834 RUNDC1Q96C34 613 aa9.69□□□□□ -0.86
ZIM3-201ENST00000269834 COL4A3BPQ9Y5P4 624 aa9.69□□□□□ -0.86
ZIM3-201ENST00000269834 TMEM87AQ8NBN3 555 aa9.69□□□□□ -0.86
ZIM3-201ENST00000269834 CAMSAP1Q5T5Y3 1602 aa9.69□□□□□ -0.86
ZIM3-201ENST00000269834 USP17L3A6NCW0 530 aa9.69□□□□□ -0.86
ZIM3-201ENST00000269834 USP17L4A6NCW7 530 aa9.69□□□□□ -0.86
ZIM3-201ENST00000269834 FOXD4Q12950 439 aaPredicted RBP9.69□□□□□ -0.86
ZIM3-201ENST00000269834 USP17L2Q6R6M4 530 aa9.69□□□□□ -0.86
ZIM3-201ENST00000269834 USP17L1Q7RTZ2 530 aa9.69□□□□□ -0.86
ZIM3-201ENST00000269834 CD109Q6YHK3 1445 aa9.68□□□□□ -0.86
ZIM3-201ENST00000269834 NEO1Q92859 1461 aa9.68□□□□□ -0.86
ZIM3-201ENST00000269834 ADGRF5Q8IZF2 1346 aa9.68□□□□□ -0.86
ZIM3-201ENST00000269834 YEATS2Q9ULM3 1422 aa9.68□□□□□ -0.86
ZIM3-201ENST00000269834 USP17L15C9J2P7 530 aa9.68□□□□□ -0.86
ZIM3-201ENST00000269834 USP17L10C9JJH3 530 aa9.68□□□□□ -0.86
ZIM3-201ENST00000269834 USP17L13C9JLJ4 530 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms