RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 STARD3NLO95772 234 aa23.46■■□□□ 1.35
CSNK1D-201ENST00000269361 PPP2R1AP30153 589 aa23.46■■□□□ 1.35
CSNK1D-201ENST00000269361 PRKAR2BP31323 418 aa23.46■■□□□ 1.35
CSNK1D-201ENST00000269361 RSPH6AQ9H0K4 717 aa23.46■■□□□ 1.35
CSNK1D-201ENST00000269361 NUDCQ9Y266 331 aa23.46■■□□□ 1.35
CSNK1D-201ENST00000269361 COL15A1P39059 1388 aa23.45■■□□□ 1.34
CSNK1D-201ENST00000269361 ZNF790Q6PG37 636 aa23.45■■□□□ 1.34
CSNK1D-201ENST00000269361 ARHGAP27Q6ZUM4 889 aa23.45■■□□□ 1.34
CSNK1D-201ENST00000269361 ZNF496Q96IT1 587 aaPredicted RBP23.45■■□□□ 1.34
CSNK1D-201ENST00000269361 PIM2Q9P1W9 311 aa23.45■■□□□ 1.34
CSNK1D-201ENST00000269361 KIAA1551Q9HCM1 1747 aa23.45■■□□□ 1.34
CSNK1D-201ENST00000269361 CANXP27824 592 aaKnown RBP23.44■■□□□ 1.34
CSNK1D-201ENST00000269361 NFIXQ14938 502 aa23.43■■□□□ 1.34
CSNK1D-201ENST00000269361 U2AF1L5P0DN76 240 aaPredicted RBP23.42■■□□□ 1.34
CSNK1D-201ENST00000269361 U2AF1Q01081 240 aaKnown RBP eCLIP23.42■■□□□ 1.346e-7■□□□□ 10.7
CSNK1D-201ENST00000269361 TEX13AQ9BXU3 409 aaPredicted RBP23.42■■□□□ 1.34
CSNK1D-201ENST00000269361 BCL2L12Q9HB09 334 aa23.42■■□□□ 1.34
CSNK1D-201ENST00000269361 CEMIPQ8WUJ3 1361 aa23.41■■□□□ 1.34
CSNK1D-201ENST00000269361 EIF5P55010 431 aaKnown RBP23.41■■□□□ 1.34
CSNK1D-201ENST00000269361 DALRD3Q5D0E6 543 aaKnown RBP23.41■■□□□ 1.34
CSNK1D-201ENST00000269361 N4BP2Q86UW6 1770 aaPredicted RBP23.41■■□□□ 1.34
CSNK1D-201ENST00000269361 HEG1Q9ULI3 1381 aa23.4■■□□□ 1.34
CSNK1D-201ENST00000269361 CHRNA5P30532 468 aa23.4■■□□□ 1.34
CSNK1D-201ENST00000269361 FMNL2Q96PY5 1086 aa23.4■■□□□ 1.34
CSNK1D-201ENST00000269361 A0A087WZG4 1122 aa23.39■■□□□ 1.33
CSNK1D-201ENST00000269361 BTBD11A6QL63 1104 aa23.38■■□□□ 1.33
CSNK1D-201ENST00000269361 SERPINB2P05120 415 aa23.37■■□□□ 1.33
CSNK1D-201ENST00000269361 KCNQ3O43525 872 aa23.36■■□□□ 1.33
CSNK1D-201ENST00000269361 UBR2Q8IWV8 1755 aa23.36■■□□□ 1.33
CSNK1D-201ENST00000269361 RTF1Q92541 710 aaKnown RBP23.35■■□□□ 1.33
CSNK1D-201ENST00000269361 IL6STP40189 918 aaPredicted RBP23.34■■□□□ 1.33
CSNK1D-201ENST00000269361 BICDL1Q6ZP65 573 aa23.34■■□□□ 1.33
CSNK1D-201ENST00000269361 MCM10Q7L590 875 aa23.34■■□□□ 1.33
CSNK1D-201ENST00000269361 ZNF330Q9Y3S2 320 aaPredicted RBP23.34■■□□□ 1.33
CSNK1D-201ENST00000269361 KIF3CO14782 793 aa23.33■■□□□ 1.33
CSNK1D-201ENST00000269361 A1BGP04217 495 aa23.33■■□□□ 1.33
CSNK1D-201ENST00000269361 C9orf131Q5VYM1 1079 aa23.33■■□□□ 1.33
CSNK1D-201ENST00000269361 TBC1D2BQ9UPU7 963 aa23.33■■□□□ 1.33
CSNK1D-201ENST00000269361 VIRMAQ69YN4 1812 aaKnown RBP23.33■■□□□ 1.32
CSNK1D-201ENST00000269361 HTATSF1O43719 755 aaKnown RBP23.31■■□□□ 1.32
CSNK1D-201ENST00000269361 TBC1D9BQ66K14 1250 aa23.31■■□□□ 1.32
CSNK1D-201ENST00000269361 DCTN1Q14203 1278 aa23.3■■□□□ 1.32
CSNK1D-201ENST00000269361 NPM2Q86SE8 214 aaKnown RBP23.3■■□□□ 1.32
CSNK1D-201ENST00000269361 USP16Q9Y5T5 823 aa23.3■■□□□ 1.32
CSNK1D-201ENST00000269361 BRCA1P38398 1863 aaKnown RBP23.29■■□□□ 1.32
CSNK1D-201ENST00000269361 C2CD5Q86YS7 1000 aa23.29■■□□□ 1.32
CSNK1D-201ENST00000269361 SIPA1L3O60292 1781 aaPredicted RBP23.29■■□□□ 1.32
CSNK1D-201ENST00000269361 H0YIN7 160 aa23.28■■□□□ 1.32
CSNK1D-201ENST00000269361 CEP350Q5VT06 3117 aa23.27■■□□□ 1.32
CSNK1D-201ENST00000269361 CAMTA2O94983 1202 aa23.27■■□□□ 1.32
CSNK1D-201ENST00000269361 SNRPA1P09661 255 aaKnown RBP23.27■■□□□ 1.32
CSNK1D-201ENST00000269361 HSPA6P17066 643 aa23.27■■□□□ 1.32
CSNK1D-201ENST00000269361 TTLL6Q8N841 843 aa23.27■■□□□ 1.32
CSNK1D-201ENST00000269361 RNF181Q9P0P0 153 aa23.27■■□□□ 1.32
CSNK1D-201ENST00000269361 CARMIL3Q8ND23 1372 aa23.27■■□□□ 1.31
CSNK1D-201ENST00000269361 PRAMEF22A3QJZ6 481 aa23.26■■□□□ 1.31
CSNK1D-201ENST00000269361 TAF7Q15545 349 aaPredicted RBP23.26■■□□□ 1.31
CSNK1D-201ENST00000269361 NMRK2Q9NPI5 230 aa23.26■■□□□ 1.31
CSNK1D-201ENST00000269361 NRXN2Q9P2S2 1712 aa23.25■■□□□ 1.31
CSNK1D-201ENST00000269361 NEFMP07197 916 aa23.25■■□□□ 1.31
CSNK1D-201ENST00000269361 DZIP3Q86Y13 1208 aaKnown RBP23.25■■□□□ 1.31
CSNK1D-201ENST00000269361 SETDB2Q96T68 719 aa23.25■■□□□ 1.31
CSNK1D-201ENST00000269361 BRIP1Q9BX63 1249 aa23.25■■□□□ 1.31
CSNK1D-201ENST00000269361 PIP4K2AP48426 406 aaPredicted RBP23.24■■□□□ 1.31
CSNK1D-201ENST00000269361 PRR5LQ6MZQ0 368 aa23.24■■□□□ 1.31
CSNK1D-201ENST00000269361 ARFGEF1Q9Y6D6 1849 aa23.24■■□□□ 1.31
CSNK1D-201ENST00000269361 TOMM70O94826 608 aa23.23■■□□□ 1.31
CSNK1D-201ENST00000269361 PDE6BP35913 854 aa23.23■■□□□ 1.31
CSNK1D-201ENST00000269361 PDZRN3Q9UPQ7 1066 aa23.23■■□□□ 1.31
CSNK1D-201ENST00000269361 CCDC24Q8N4L8 307 aa23.22■■□□□ 1.31
CSNK1D-201ENST00000269361 PLEKHF1Q96S99 279 aa23.22■■□□□ 1.31
CSNK1D-201ENST00000269361 MIS18AQ9NYP9 233 aa23.22■■□□□ 1.31
CSNK1D-201ENST00000269361 AFDNP55196 1824 aaKnown RBP23.22■■□□□ 1.31
CSNK1D-201ENST00000269361 RASSF7Q02833 373 aa23.21■■□□□ 1.31
CSNK1D-201ENST00000269361 KDM2BQ8NHM5 1336 aa23.2■■□□□ 1.3
CSNK1D-201ENST00000269361 NBPF26B4DH59 902 aa23.2■■□□□ 1.3
CSNK1D-201ENST00000269361 NBPF10Q6P3W6 841 aaKnown RBP23.2■■□□□ 1.3
CSNK1D-201ENST00000269361 CLEC4GQ6UXB4 293 aa23.2■■□□□ 1.3
CSNK1D-201ENST00000269361 NBPF15Q8N660 670 aa23.2■■□□□ 1.3
CSNK1D-201ENST00000269361 CNBD1Q8NA66 436 aa23.2■■□□□ 1.3
CSNK1D-201ENST00000269361 ZNF622Q969S3 477 aaKnown RBP eCLIP23.2■■□□□ 1.3
CSNK1D-201ENST00000269361 NPHP1O15259 732 aa23.19■■□□□ 1.3
CSNK1D-201ENST00000269361 LMNB1P20700 586 aa23.19■■□□□ 1.3
CSNK1D-201ENST00000269361 NFE2L2Q16236 605 aa23.18■■□□□ 1.3
CSNK1D-201ENST00000269361 PNISRQ8TF01 805 aaKnown RBP23.18■■□□□ 1.3
CSNK1D-201ENST00000269361 PNNQ9H307 717 aaKnown RBP23.18■■□□□ 1.3
CSNK1D-201ENST00000269361 SCN7AQ01118 1682 aa23.18■■□□□ 1.3
CSNK1D-201ENST00000269361 PRELPP51888 382 aa23.17■■□□□ 1.3
CSNK1D-201ENST00000269361 ST5P78524 1137 aa23.17■■□□□ 1.3
CSNK1D-201ENST00000269361 ZNF652Q9Y2D9 606 aa23.17■■□□□ 1.3
CSNK1D-201ENST00000269361 ZC3H4Q9UPT8 1303 aaKnown RBP23.16■■□□□ 1.3
CSNK1D-201ENST00000269361 C16orf71Q8IYS4 520 aaPredicted RBP23.16■■□□□ 1.3
CSNK1D-201ENST00000269361 RRAGCQ9HB90 399 aa23.16■■□□□ 1.3
CSNK1D-201ENST00000269361 NFKBIEO00221 500 aa23.15■■□□□ 1.3
CSNK1D-201ENST00000269361 RGL2O15211 777 aa23.15■■□□□ 1.3
CSNK1D-201ENST00000269361 NBPF5PQ86XG9 351 aaPredicted RBP23.15■■□□□ 1.3
CSNK1D-201ENST00000269361 RBM46Q8TBY0 533 aaKnown RBP23.15■■□□□ 1.3
CSNK1D-201ENST00000269361 C21orf2O43822 256 aa23.14■■□□□ 1.29
CSNK1D-201ENST00000269361 RALBP1Q15311 655 aa23.14■■□□□ 1.29
CSNK1D-201ENST00000269361 THUMPD2Q9BTF0 503 aaKnown RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms