RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 SHANK3Q9BYB0 1731 aa28.77■■■□□ 2.2
RAB40B-201ENST00000269347 TOM1L2Q6ZVM7 507 aa28.77■■■□□ 2.2
RAB40B-201ENST00000269347 TBC1D2Q9BYX2 928 aa28.77■■■□□ 2.2
RAB40B-201ENST00000269347 LARP1Q6PKG0 1096 aaKnown RBP28.75■■■□□ 2.19
RAB40B-201ENST00000269347 CWF19L2Q2TBE0 894 aaKnown RBP28.75■■■□□ 2.19
RAB40B-201ENST00000269347 DCAF5Q96JK2 942 aa28.75■■■□□ 2.19
RAB40B-201ENST00000269347 USP16Q9Y5T5 823 aa28.75■■■□□ 2.19
RAB40B-201ENST00000269347 SALL3Q9BXA9 1300 aa28.75■■■□□ 2.19
RAB40B-201ENST00000269347 PARP4Q9UKK3 1724 aaKnown RBP28.74■■■□□ 2.19
RAB40B-201ENST00000269347 AIMP1Q12904 312 aaKnown RBP28.74■■■□□ 2.19
RAB40B-201ENST00000269347 TUBGCP6Q96RT7 1819 aa28.73■■■□□ 2.19
RAB40B-201ENST00000269347 PPP1R42Q7Z4L9 355 aa28.73■■■□□ 2.19
RAB40B-201ENST00000269347 STRN4Q9NRL3 753 aa28.73■■■□□ 2.19
RAB40B-201ENST00000269347 IBTKQ9P2D0 1353 aaPredicted RBP28.73■■■□□ 2.19
RAB40B-201ENST00000269347 DAXXQ9UER7 740 aaPredicted RBP28.72■■■□□ 2.19
RAB40B-201ENST00000269347 SDSP20132 328 aa28.72■■■□□ 2.19
RAB40B-201ENST00000269347 SSH3Q8TE77 659 aa28.72■■■□□ 2.19
RAB40B-201ENST00000269347 KSR2Q6VAB6 950 aa28.71■■■□□ 2.19
RAB40B-201ENST00000269347 KIF2CQ99661 725 aa28.71■■■□□ 2.19
RAB40B-201ENST00000269347 DDX21Q9NR30 783 aaKnown RBP eCLIP28.71■■■□□ 2.19
RAB40B-201ENST00000269347 MYL6BP14649 208 aa28.71■■■□□ 2.19
RAB40B-201ENST00000269347 LRP10Q7Z4F1 713 aa28.71■■■□□ 2.19
RAB40B-201ENST00000269347 RBM25P49756 843 aaKnown RBP28.69■■■□□ 2.18
RAB40B-201ENST00000269347 POLA2Q14181 598 aa28.69■■■□□ 2.18
RAB40B-201ENST00000269347 PDE1AP54750 535 aa28.69■■■□□ 2.18
RAB40B-201ENST00000269347 CDC45O75419 566 aa28.68■■■□□ 2.18
RAB40B-201ENST00000269347 ZCRB1Q8TBF4 217 aaKnown RBP28.68■■■□□ 2.18
RAB40B-201ENST00000269347 LRRCC1Q9C099 1032 aa28.67■■■□□ 2.18
RAB40B-201ENST00000269347 HYPKQ9NX55 129 aa28.67■■■□□ 2.18
RAB40B-201ENST00000269347 CABP4P57796 275 aa28.66■■■□□ 2.18
RAB40B-201ENST00000269347 IL1RAPL2Q9NP60 686 aa28.66■■■□□ 2.18
RAB40B-201ENST00000269347 KAZALD1Q96I82 304 aa28.65■■■□□ 2.18
RAB40B-201ENST00000269347 USP35Q9P2H5 1018 aa28.65■■■□□ 2.18
RAB40B-201ENST00000269347 PLEKHG2Q9H7P9 1386 aa28.65■■■□□ 2.18
RAB40B-201ENST00000269347 IGKV5-2P06315 115 aa28.65■■■□□ 2.18
RAB40B-201ENST00000269347 XAGE3Q8WTP9 111 aa28.65■■■□□ 2.18
RAB40B-201ENST00000269347 CARD10Q9BWT7 1032 aa28.65■■■□□ 2.18
RAB40B-201ENST00000269347 OSBPL3Q9H4L5 887 aa28.65■■■□□ 2.18
RAB40B-201ENST00000269347 SRGAP3O43295 1099 aa28.64■■■□□ 2.18
RAB40B-201ENST00000269347 SLKQ9H2G2 1235 aaPredicted RBP28.64■■■□□ 2.18
RAB40B-201ENST00000269347 ROBO1Q9Y6N7 1651 aa28.64■■■□□ 2.18
RAB40B-201ENST00000269347 RTL5Q5HYW3 569 aaPredicted RBP28.64■■■□□ 2.17
RAB40B-201ENST00000269347 TOGARAM1Q9Y4F4 1720 aa28.64■■■□□ 2.17
RAB40B-201ENST00000269347 COPS6Q7L5N1 327 aa28.63■■■□□ 2.17
RAB40B-201ENST00000269347 SPRYD3Q8NCJ5 442 aa28.63■■■□□ 2.17
RAB40B-201ENST00000269347 DDX54Q8TDD1 881 aaKnown RBP28.62■■■□□ 2.17
RAB40B-201ENST00000269347 RBM42Q9BTD8 480 aaKnown RBP28.62■■■□□ 2.17
RAB40B-201ENST00000269347 CHMP4AQ9BY43 222 aa28.62■■■□□ 2.17
RAB40B-201ENST00000269347 PCDH11XQ9BZA7 1347 aa28.62■■■□□ 2.17
RAB40B-201ENST00000269347 PCDH11YQ9BZA8 1340 aa28.62■■■□□ 2.17
RAB40B-201ENST00000269347 IL2RBP14784 551 aa28.62■■■□□ 2.17
RAB40B-201ENST00000269347 ANTXR1Q9H6X2 564 aa28.62■■■□□ 2.17
RAB40B-201ENST00000269347 SURF6O75683 361 aaKnown RBP28.61■■■□□ 2.17
RAB40B-201ENST00000269347 SNRPA1P09661 255 aaKnown RBP28.61■■■□□ 2.17
RAB40B-201ENST00000269347 TTC5Q8N0Z6 440 aa28.61■■■□□ 2.17
RAB40B-201ENST00000269347 CD2BP2O95400 341 aaKnown RBP28.61■■■□□ 2.17
RAB40B-201ENST00000269347 BECN1Q14457 450 aa28.61■■■□□ 2.17
RAB40B-201ENST00000269347 UBR2Q8IWV8 1755 aa28.6■■■□□ 2.17
RAB40B-201ENST00000269347 ALDH1L1O75891 902 aa28.6■■■□□ 2.17
RAB40B-201ENST00000269347 HSP90AB1P08238 724 aaKnown RBP28.6■■■□□ 2.17
RAB40B-201ENST00000269347 NFKBIBQ15653 356 aa28.6■■■□□ 2.17
RAB40B-201ENST00000269347 SUCLG2Q96I99 432 aa28.6■■■□□ 2.17
RAB40B-201ENST00000269347 FMNL2Q96PY5 1086 aa28.6■■■□□ 2.17
RAB40B-201ENST00000269347 NUTM1Q86Y26 1132 aa28.59■■■□□ 2.17
RAB40B-201ENST00000269347 BTG4Q9NY30 223 aa28.59■■■□□ 2.17
RAB40B-201ENST00000269347 MX1P20591 662 aa28.58■■■□□ 2.17
RAB40B-201ENST00000269347 EVA1CP58658 441 aa28.58■■■□□ 2.17
RAB40B-201ENST00000269347 UNC5CLQ8IV45 518 aa28.58■■■□□ 2.17
RAB40B-201ENST00000269347 LINS1Q8NG48 757 aa28.58■■■□□ 2.17
RAB40B-201ENST00000269347 LAMB4A4D0S4 1761 aa28.58■■■□□ 2.17
RAB40B-201ENST00000269347 KCPQ6ZWJ8 1503 aa28.58■■■□□ 2.17
RAB40B-201ENST00000269347 C9orf78Q9NZ63 289 aaPredicted RBP28.58■■■□□ 2.17
RAB40B-201ENST00000269347 PA2G4Q9UQ80 394 aaKnown RBP28.58■■■□□ 2.17
RAB40B-201ENST00000269347 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.58■■■□□ 2.17
RAB40B-201ENST00000269347 PAPPAQ13219 1627 aa28.57■■■□□ 2.16
RAB40B-201ENST00000269347 JARID2Q92833 1246 aaPredicted RBP28.57■■■□□ 2.16
RAB40B-201ENST00000269347 NBPF26B4DH59 902 aa28.57■■■□□ 2.16
RAB40B-201ENST00000269347 NKX1-1Q15270 411 aaPredicted RBP28.57■■■□□ 2.16
RAB40B-201ENST00000269347 NBPF14Q5TI25 921 aa28.57■■■□□ 2.16
RAB40B-201ENST00000269347 NBPF10Q6P3W6 841 aaKnown RBP28.57■■■□□ 2.16
RAB40B-201ENST00000269347 RIC3Q7Z5B4 369 aa28.57■■■□□ 2.16
RAB40B-201ENST00000269347 NBPF15Q8N660 670 aa28.57■■■□□ 2.16
RAB40B-201ENST00000269347 RHPN1Q8TCX5 695 aa28.57■■■□□ 2.16
RAB40B-201ENST00000269347 COL16A1Q07092 1604 aaPredicted RBP28.56■■■□□ 2.16
RAB40B-201ENST00000269347 ARFGEF2Q9Y6D5 1785 aa28.55■■■□□ 2.16
RAB40B-201ENST00000269347 GRM8O00222 908 aa28.55■■■□□ 2.16
RAB40B-201ENST00000269347 MTX1Q13505 466 aa28.55■■■□□ 2.16
RAB40B-201ENST00000269347 UTYO14607 1347 aa28.54■■■□□ 2.16
RAB40B-201ENST00000269347 MYD88Q99836 296 aa28.54■■■□□ 2.16
RAB40B-201ENST00000269347 NEURL1BA8MQ27 555 aa28.54■■■□□ 2.16
RAB40B-201ENST00000269347 DEKP35659 375 aaKnown RBP28.54■■■□□ 2.16
RAB40B-201ENST00000269347 USP26Q9BXU7 913 aa28.54■■■□□ 2.16
RAB40B-201ENST00000269347 STAP2Q9UGK3 403 aa28.54■■■□□ 2.16
RAB40B-201ENST00000269347 EPHA10Q5JZY3 1008 aa28.53■■■□□ 2.16
RAB40B-201ENST00000269347 BICC1Q9H694 974 aaKnown RBP28.53■■■□□ 2.16
RAB40B-201ENST00000269347 LTBP4Q8N2S1 1624 aa28.53■■■□□ 2.16
RAB40B-201ENST00000269347 DDX58O95786 925 aaKnown RBP28.52■■■□□ 2.16
RAB40B-201ENST00000269347 FRAT2O75474 233 aaPredicted RBP28.52■■■□□ 2.16
RAB40B-201ENST00000269347 AFDNP55196 1824 aaKnown RBP28.52■■■□□ 2.16
RAB40B-201ENST00000269347 ERVV-2B6SEH9 535 aa28.51■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms