RNA–Protein interactions for RNA: ENST00000268896.9

PCTP-201, Transcript of phosphatidylcholine transfer protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCTP, Length 2,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-201ENST00000268896 CENPQQ7L2Z9 268 aaPredicted RBP20.41■□□□□ 0.86
PCTP-201ENST00000268896 ACSBG1Q96GR2 724 aa20.41■□□□□ 0.86
PCTP-201ENST00000268896 DBF4Q9UBU7 674 aaPredicted RBP20.41■□□□□ 0.86
PCTP-201ENST00000268896 MYL6BP14649 208 aa20.41■□□□□ 0.86
PCTP-201ENST00000268896 INTS3Q68E01 1043 aaKnown RBP20.41■□□□□ 0.86
PCTP-201ENST00000268896 MARCH10Q8NA82 808 aaPredicted RBP20.41■□□□□ 0.86
PCTP-201ENST00000268896 CACNA1FO60840 1977 aa20.4■□□□□ 0.86
PCTP-201ENST00000268896 AAMPQ13685 434 aa20.4■□□□□ 0.86
PCTP-201ENST00000268896 CHMP4AQ9BY43 222 aa20.4■□□□□ 0.86
PCTP-201ENST00000268896 ASAP1Q9ULH1 1129 aa20.4■□□□□ 0.86
PCTP-201ENST00000268896 ITGB4P16144 1822 aa20.4■□□□□ 0.86
PCTP-201ENST00000268896 PRIM1P49642 420 aaKnown RBP20.39■□□□□ 0.85
PCTP-201ENST00000268896 AIMP1Q12904 312 aaKnown RBP20.39■□□□□ 0.85
PCTP-201ENST00000268896 PAPPAQ13219 1627 aa20.38■□□□□ 0.85
PCTP-201ENST00000268896 DOT1LQ8TEK3 1739 aa20.37■□□□□ 0.85
PCTP-201ENST00000268896 GLI3P10071 1580 aa20.37■□□□□ 0.85
PCTP-201ENST00000268896 KCPQ6ZWJ8 1503 aa20.37■□□□□ 0.85
PCTP-201ENST00000268896 PDIA6Q15084 440 aa20.37■□□□□ 0.85
PCTP-201ENST00000268896 PI4KAP2A4QPH2 592 aa20.36■□□□□ 0.85
PCTP-201ENST00000268896 PI4KAP1Q8N8J0 262 aa20.36■□□□□ 0.85
PCTP-201ENST00000268896 RBM42Q9BTD8 480 aaKnown RBP20.36■□□□□ 0.85
PCTP-201ENST00000268896 DDX21Q9NR30 783 aaKnown RBP eCLIP20.36■□□□□ 0.85
PCTP-201ENST00000268896 ATG3Q9NT62 314 aa20.36■□□□□ 0.85
PCTP-201ENST00000268896 UBR2Q8IWV8 1755 aa20.36■□□□□ 0.85
PCTP-201ENST00000268896 CCT4P50991 539 aaKnown RBP20.36■□□□□ 0.85
PCTP-201ENST00000268896 MEIS3Q99687 375 aa20.36■□□□□ 0.85
PCTP-201ENST00000268896 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.35■□□□□ 0.85
PCTP-201ENST00000268896 RWDD1Q9H446 243 aaPredicted RBP20.35■□□□□ 0.85
PCTP-201ENST00000268896 HYPKQ9NX55 129 aa20.35■□□□□ 0.85
PCTP-201ENST00000268896 CHMP4BQ9H444 224 aaKnown RBP20.34■□□□□ 0.85
PCTP-201ENST00000268896 BCL9O00512 1426 aa20.34■□□□□ 0.85
PCTP-201ENST00000268896 GJD4Q96KN9 370 aaPredicted RBP20.33■□□□□ 0.85
PCTP-201ENST00000268896 DNAAF4Q8WXU2 420 aa20.32■□□□□ 0.84
PCTP-201ENST00000268896 ADCY9O60503 1353 aa20.32■□□□□ 0.84
PCTP-201ENST00000268896 LAMB4A4D0S4 1761 aa20.32■□□□□ 0.84
PCTP-201ENST00000268896 A1BGP04217 495 aa20.32■□□□□ 0.84
PCTP-201ENST00000268896 XAGE3Q8WTP9 111 aa20.32■□□□□ 0.84
PCTP-201ENST00000268896 MAP3K2Q9Y2U5 619 aa20.32■□□□□ 0.84
PCTP-201ENST00000268896 FAM182BQ5T319 152 aa20.31■□□□□ 0.84
PCTP-201ENST00000268896 COPS6Q7L5N1 327 aa20.31■□□□□ 0.84
PCTP-201ENST00000268896 KCNQ2O43526 872 aa20.3■□□□□ 0.84
PCTP-201ENST00000268896 DNAJC10Q8IXB1 793 aa20.3■□□□□ 0.84
PCTP-201ENST00000268896 TRPC5Q9UL62 973 aaPredicted RBP20.3■□□□□ 0.84
PCTP-201ENST00000268896 KSR2Q6VAB6 950 aa20.29■□□□□ 0.84
PCTP-201ENST00000268896 SRCIN1Q9C0H9 1055 aa20.29■□□□□ 0.84
PCTP-201ENST00000268896 RGS3P49796 1198 aa20.29■□□□□ 0.84
PCTP-201ENST00000268896 RIC3Q7Z5B4 369 aa20.29■□□□□ 0.84
PCTP-201ENST00000268896 QTRT2Q9H974 415 aaKnown RBP20.29■□□□□ 0.84
PCTP-201ENST00000268896 NBPF26B4DH59 902 aa20.28■□□□□ 0.84
PCTP-201ENST00000268896 DDX58O95786 925 aaKnown RBP20.28■□□□□ 0.84
PCTP-201ENST00000268896 HDAC1Q13547 482 aaPredicted RBP20.28■□□□□ 0.84
PCTP-201ENST00000268896 NBPF14Q5TI25 921 aa20.28■□□□□ 0.84
PCTP-201ENST00000268896 NBPF10Q6P3W6 841 aaKnown RBP20.28■□□□□ 0.84
PCTP-201ENST00000268896 NBPF15Q8N660 670 aa20.28■□□□□ 0.84
PCTP-201ENST00000268896 ZNF330Q9Y3S2 320 aaPredicted RBP20.28■□□□□ 0.84
PCTP-201ENST00000268896 PXDNLA1KZ92 1463 aa20.28■□□□□ 0.84
PCTP-201ENST00000268896 ATRNO75882 1429 aa20.28■□□□□ 0.84
PCTP-201ENST00000268896 BEND3Q5T5X7 828 aa20.27■□□□□ 0.84
PCTP-201ENST00000268896 LRP10Q7Z4F1 713 aa20.27■□□□□ 0.84
PCTP-201ENST00000268896 SIRT2Q8IXJ6 389 aa20.27■□□□□ 0.84
PCTP-201ENST00000268896 SLC4A9Q96Q91 983 aa20.27■□□□□ 0.84
PCTP-201ENST00000268896 THSD7AQ9UPZ6 1657 aa20.26■□□□□ 0.83
PCTP-201ENST00000268896 CWF19L2Q2TBE0 894 aaKnown RBP20.26■□□□□ 0.83
PCTP-201ENST00000268896 PDZRN3Q9UPQ7 1066 aa20.25■□□□□ 0.83
PCTP-201ENST00000268896 N4BP2Q86UW6 1770 aaPredicted RBP20.25■□□□□ 0.83
PCTP-201ENST00000268896 SEPT12Q8IYM1 358 aa20.24■□□□□ 0.83
PCTP-201ENST00000268896 USP44Q9H0E7 712 aa20.24■□□□□ 0.83
PCTP-201ENST00000268896 CEP85Q6P2H3 762 aa20.24■□□□□ 0.83
PCTP-201ENST00000268896 PTF1AQ7RTS3 328 aa20.24■□□□□ 0.83
PCTP-201ENST00000268896 VSIG10Q8N0Z9 540 aa20.24■□□□□ 0.83
PCTP-201ENST00000268896 GNAI2P04899 355 aa20.23■□□□□ 0.83
PCTP-201ENST00000268896 GNAI3P08754 354 aa20.23■□□□□ 0.83
PCTP-201ENST00000268896 TTLL7Q6ZT98 887 aa20.23■□□□□ 0.83
PCTP-201ENST00000268896 ANKRD13DQ6ZTN6 518 aa20.23■□□□□ 0.83
PCTP-201ENST00000268896 MYD88Q99836 296 aa20.23■□□□□ 0.83
PCTP-201ENST00000268896 ATP10DQ9P241 1426 aa20.23■□□□□ 0.83
PCTP-201ENST00000268896 ERBB4Q15303 1308 aa20.22■□□□□ 0.83
PCTP-201ENST00000268896 UBTFL1P0CB47 393 aaPredicted RBP20.22■□□□□ 0.83
PCTP-201ENST00000268896 LRRFIP2Q9Y608 721 aaKnown RBP20.22■□□□□ 0.83
PCTP-201ENST00000268896 STARD3NLO95772 234 aa20.22■□□□□ 0.83
PCTP-201ENST00000268896 ANKRD44Q8N8A2 993 aa20.22■□□□□ 0.83
PCTP-201ENST00000268896 ARXQ96QS3 562 aa20.22■□□□□ 0.83
PCTP-201ENST00000268896 TEX13AQ9BXU3 409 aaPredicted RBP20.22■□□□□ 0.83
PCTP-201ENST00000268896 NBPF7P0C2Y1 421 aaPredicted RBP20.21■□□□□ 0.83
PCTP-201ENST00000268896 BCL11AQ9H165 835 aa20.21■□□□□ 0.83
PCTP-201ENST00000268896 RBM19Q9Y4C8 960 aaKnown RBP20.21■□□□□ 0.83
PCTP-201ENST00000268896 PALLDQ8WX93 1383 aa20.2■□□□□ 0.82
PCTP-201ENST00000268896 ATP6V1AP38606 617 aa20.2■□□□□ 0.82
PCTP-201ENST00000268896 ZBTB3Q9H5J0 574 aa20.2■□□□□ 0.82
PCTP-201ENST00000268896 IGKV5-2P06315 115 aa20.19■□□□□ 0.82
PCTP-201ENST00000268896 CYP19A1P11511 503 aaPredicted RBP20.19■□□□□ 0.82
PCTP-201ENST00000268896 NEXNQ0ZGT2 675 aa20.19■□□□□ 0.82
PCTP-201ENST00000268896 RPAP2Q8IXW5 612 aaPredicted RBP20.19■□□□□ 0.82
PCTP-201ENST00000268896 SMC5Q8IY18 1101 aa20.19■□□□□ 0.82
PCTP-201ENST00000268896 METTL22Q9BUU2 404 aaPredicted RBP20.19■□□□□ 0.82
PCTP-201ENST00000268896 C9orf78Q9NZ63 289 aaPredicted RBP20.19■□□□□ 0.82
PCTP-201ENST00000268896 LINS1Q8NG48 757 aa20.19■□□□□ 0.82
PCTP-201ENST00000268896 LOC102724428A0A0B4J2F2 783 aa20.18■□□□□ 0.82
PCTP-201ENST00000268896 ATP5J2-PTCD1G3V325 749 aa20.18■□□□□ 0.82
PCTP-201ENST00000268896 SIK1P57059 783 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms