RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 ADAMTS13Q76LX8 1427 aa20.63■□□□□ 0.89
SPG7-201ENST00000268704 CPA1P15085 419 aa20.63■□□□□ 0.89
SPG7-201ENST00000268704 ZNF830Q96NB3 372 aaPredicted RBP20.63■□□□□ 0.89
SPG7-201ENST00000268704 IGSF1Q8N6C5 1336 aa20.63■□□□□ 0.89
SPG7-201ENST00000268704 SURF6O75683 361 aaKnown RBP20.62■□□□□ 0.89
SPG7-201ENST00000268704 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.62■□□□□ 0.89
SPG7-201ENST00000268704 HSPA4P34932 840 aa20.62■□□□□ 0.89
SPG7-201ENST00000268704 SOS1Q07889 1333 aaPredicted RBP20.62■□□□□ 0.89
SPG7-201ENST00000268704 SBNO1A3KN83 1393 aa20.62■□□□□ 0.89
SPG7-201ENST00000268704 SSH2Q76I76 1423 aa20.62■□□□□ 0.89
SPG7-201ENST00000268704 PPP1R42Q7Z4L9 355 aa20.62■□□□□ 0.89
SPG7-201ENST00000268704 IL17REQ8NFR9 667 aa20.62■□□□□ 0.89
SPG7-201ENST00000268704 TMEM2Q9UHN6 1383 aa20.61■□□□□ 0.89
SPG7-201ENST00000268704 LTKP29376 864 aa20.61■□□□□ 0.89
SPG7-201ENST00000268704 RASEFQ8IZ41 740 aa20.61■□□□□ 0.89
SPG7-201ENST00000268704 GNAT3A8MTJ3 354 aa20.61■□□□□ 0.89
SPG7-201ENST00000268704 WDR33Q9C0J8 1336 aaKnown RBP20.6■□□□□ 0.89
SPG7-201ENST00000268704 SYAP1Q96A49 352 aaPredicted RBP20.6■□□□□ 0.89
SPG7-201ENST00000268704 USP25Q9UHP3 1055 aa20.6■□□□□ 0.89
SPG7-201ENST00000268704 NGDNQ8NEJ9 315 aaKnown RBP20.6■□□□□ 0.89
SPG7-201ENST00000268704 TERF1P54274 439 aa20.59■□□□□ 0.89
SPG7-201ENST00000268704 USHBP1Q8N6Y0 703 aa20.59■□□□□ 0.89
SPG7-201ENST00000268704 PI4K2BQ8TCG2 481 aa20.59■□□□□ 0.89
SPG7-201ENST00000268704 SPG7Q9UQ90 795 aa20.59■□□□□ 0.89
SPG7-201ENST00000268704 SNX14Q9Y5W7 946 aa20.59■□□□□ 0.89
SPG7-201ENST00000268704 HDGFP51858 240 aaKnown RBP20.59■□□□□ 0.89
SPG7-201ENST00000268704 JARID2Q92833 1246 aaPredicted RBP20.59■□□□□ 0.89
SPG7-201ENST00000268704 AK2P54819 239 aa20.59■□□□□ 0.89
SPG7-201ENST00000268704 RGPD8O14715 1765 aaPredicted RBP20.59■□□□□ 0.89
SPG7-201ENST00000268704 HDGFL1Q5TGJ6 251 aa20.58■□□□□ 0.89
SPG7-201ENST00000268704 CWC27Q6UX04 472 aaKnown RBP20.58■□□□□ 0.89
SPG7-201ENST00000268704 SSH3Q8TE77 659 aa20.58■□□□□ 0.89
SPG7-201ENST00000268704 NBPF7P0C2Y1 421 aaPredicted RBP20.58■□□□□ 0.88
SPG7-201ENST00000268704 EIF2S2P20042 333 aaKnown RBP20.58■□□□□ 0.88
SPG7-201ENST00000268704 C17orf53Q8N3J3 647 aaPredicted RBP20.58■□□□□ 0.88
SPG7-201ENST00000268704 RHPN1Q8TCX5 695 aa20.58■□□□□ 0.88
SPG7-201ENST00000268704 TNRQ92752 1358 aa20.58■□□□□ 0.88
SPG7-201ENST00000268704 RAD50Q92878 1312 aa20.58■□□□□ 0.88
SPG7-201ENST00000268704 SRGAP3O43295 1099 aa20.57■□□□□ 0.88
SPG7-201ENST00000268704 HCLS1P14317 486 aaPredicted RBP20.57■□□□□ 0.88
SPG7-201ENST00000268704 MCM5P33992 734 aa20.57■□□□□ 0.88
SPG7-201ENST00000268704 PRDM10Q9NQV6 1147 aa20.57■□□□□ 0.88
SPG7-201ENST00000268704 PTPRUQ92729 1446 aa20.57■□□□□ 0.88
SPG7-201ENST00000268704 LRRC37A3O60309 1634 aa20.57■□□□□ 0.88
SPG7-201ENST00000268704 SGSM2O43147 1006 aa20.57■□□□□ 0.88
SPG7-201ENST00000268704 LARGE1O95461 756 aa20.57■□□□□ 0.88
SPG7-201ENST00000268704 RUFY3Q7L099 469 aa20.57■□□□□ 0.88
SPG7-201ENST00000268704 FIBPO43427 364 aa20.57■□□□□ 0.88
SPG7-201ENST00000268704 CSPP1Q1MSJ5 1256 aa20.56■□□□□ 0.88
SPG7-201ENST00000268704 DDX54Q8TDD1 881 aaKnown RBP20.56■□□□□ 0.88
SPG7-201ENST00000268704 UBR1Q8IWV7 1749 aa20.56■□□□□ 0.88
SPG7-201ENST00000268704 ANXA1P04083 346 aa20.56■□□□□ 0.88
SPG7-201ENST00000268704 NLRP6P59044 892 aa20.56■□□□□ 0.88
SPG7-201ENST00000268704 IL17RAQ96F46 866 aa20.56■□□□□ 0.88
SPG7-201ENST00000268704 TTC14Q96N46 770 aa20.55■□□□□ 0.88
SPG7-201ENST00000268704 LSG1Q9H089 658 aaKnown RBP20.55■□□□□ 0.88
SPG7-201ENST00000268704 SYT1P21579 422 aa20.55■□□□□ 0.88
SPG7-201ENST00000268704 TTC12Q9H892 705 aaPredicted RBP20.55■□□□□ 0.88
SPG7-201ENST00000268704 PHF14O94880 888 aa20.55■□□□□ 0.88
SPG7-201ENST00000268704 KIAA2012Q0VF49 1180 aa20.55■□□□□ 0.88
SPG7-201ENST00000268704 ZSCAN22P10073 491 aaPredicted RBP20.54■□□□□ 0.88
SPG7-201ENST00000268704 MAP3K5Q99683 1374 aa20.54■□□□□ 0.88
SPG7-201ENST00000268704 PIK3C2AO00443 1686 aa20.54■□□□□ 0.88
SPG7-201ENST00000268704 TAF7Q15545 349 aaPredicted RBP20.54■□□□□ 0.88
SPG7-201ENST00000268704 PLPPR3Q6T4P5 718 aa20.54■□□□□ 0.88
SPG7-201ENST00000268704 AOX1Q06278 1338 aa20.54■□□□□ 0.88
SPG7-201ENST00000268704 TTC21AQ8NDW8 1320 aa20.54■□□□□ 0.88
SPG7-201ENST00000268704 STX6O43752 255 aa20.53■□□□□ 0.88
SPG7-201ENST00000268704 DNTTIP2Q5QJE6 756 aaKnown RBP20.53■□□□□ 0.88
SPG7-201ENST00000268704 SASS6Q6UVJ0 657 aa20.53■□□□□ 0.88
SPG7-201ENST00000268704 TSC1Q92574 1164 aa20.53■□□□□ 0.88
SPG7-201ENST00000268704 CASTP20810 708 aaKnown RBP20.53■□□□□ 0.88
SPG7-201ENST00000268704 HOXC9P31274 260 aa20.53■□□□□ 0.88
SPG7-201ENST00000268704 PLCB2Q00722 1185 aa20.53■□□□□ 0.88
SPG7-201ENST00000268704 CCDC183Q5T5S1 534 aa20.53■□□□□ 0.88
SPG7-201ENST00000268704 ADCY5O95622 1261 aa20.52■□□□□ 0.88
SPG7-201ENST00000268704 POLA2Q14181 598 aa20.52■□□□□ 0.88
SPG7-201ENST00000268704 AMOTL2Q9Y2J4 779 aa20.52■□□□□ 0.88
SPG7-201ENST00000268704 CACNA1FO60840 1977 aa20.52■□□□□ 0.88
SPG7-201ENST00000268704 CCDC83Q8IWF9 413 aa20.52■□□□□ 0.87
SPG7-201ENST00000268704 ADCK5Q3MIX3 580 aa20.51■□□□□ 0.87
SPG7-201ENST00000268704 GIMAP6Q6P9H5 292 aa20.51■□□□□ 0.87
SPG7-201ENST00000268704 N4BP2Q86UW6 1770 aaPredicted RBP20.51■□□□□ 0.87
SPG7-201ENST00000268704 CNTROBQ8N137 903 aa20.51■□□□□ 0.87
SPG7-201ENST00000268704 CHPF2Q9P2E5 772 aa20.51■□□□□ 0.87
SPG7-201ENST00000268704 LIMCH1Q9UPQ0 1083 aa20.51■□□□□ 0.87
SPG7-201ENST00000268704 SMC3Q9UQE7 1217 aa20.51■□□□□ 0.87
SPG7-201ENST00000268704 HTATSF1O43719 755 aaKnown RBP20.5■□□□□ 0.87
SPG7-201ENST00000268704 PTH1RQ03431 593 aa20.5■□□□□ 0.87
SPG7-201ENST00000268704 TMEM87AQ8NBN3 555 aa20.5■□□□□ 0.87
SPG7-201ENST00000268704 F13A1P00488 732 aa20.5■□□□□ 0.87
SPG7-201ENST00000268704 KIF1BPQ96EK5 621 aa20.5■□□□□ 0.87
SPG7-201ENST00000268704 NWD1Q149M9 1564 aa20.5■□□□□ 0.87
SPG7-201ENST00000268704 PXDNLA1KZ92 1463 aa20.5■□□□□ 0.87
SPG7-201ENST00000268704 PI4KAP2A4QPH2 592 aa20.5■□□□□ 0.87
SPG7-201ENST00000268704 KCNQ3O43525 872 aa20.5■□□□□ 0.87
SPG7-201ENST00000268704 RAB11FIP3O75154 756 aa20.5■□□□□ 0.87
SPG7-201ENST00000268704 DNM1Q05193 864 aaKnown RBP20.5■□□□□ 0.87
SPG7-201ENST00000268704 PI4KAP1Q8N8J0 262 aa20.5■□□□□ 0.87
SPG7-201ENST00000268704 SETD1BQ9UPS6 1966 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms