RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 MEIS3Q99687 375 aa20.61■□□□□ 0.89
TPM1-201ENST00000267996 C1orf115Q9H7X2 142 aa20.61■□□□□ 0.89
TPM1-201ENST00000267996 SIRT2Q8IXJ6 389 aa20.61■□□□□ 0.89
TPM1-201ENST00000267996 LAMB4A4D0S4 1761 aa20.6■□□□□ 0.89
TPM1-201ENST00000267996 ATP10DQ9P241 1426 aa20.6■□□□□ 0.89
TPM1-201ENST00000267996 TMOD3Q9NYL9 352 aa20.6■□□□□ 0.89
TPM1-201ENST00000267996 USP16Q9Y5T5 823 aa20.6■□□□□ 0.89
TPM1-201ENST00000267996 ADCY9O60503 1353 aa20.6■□□□□ 0.89
TPM1-201ENST00000267996 VPS72Q15906 364 aa20.59■□□□□ 0.89
TPM1-201ENST00000267996 NGLY1Q96IV0 654 aa20.59■□□□□ 0.89
TPM1-201ENST00000267996 PDZRN3Q9UPQ7 1066 aa20.59■□□□□ 0.89
TPM1-201ENST00000267996 ITGB4P16144 1822 aa20.59■□□□□ 0.89
TPM1-201ENST00000267996 HSPA1LP34931 641 aa20.58■□□□□ 0.89
TPM1-201ENST00000267996 LRP10Q7Z4F1 713 aa20.58■□□□□ 0.89
TPM1-201ENST00000267996 DNAAF4Q8WXU2 420 aa20.58■□□□□ 0.89
TPM1-201ENST00000267996 C8orf37Q96NL8 207 aa20.58■□□□□ 0.89
TPM1-201ENST00000267996 PI4KAP2A4QPH2 592 aa20.58■□□□□ 0.88
TPM1-201ENST00000267996 DDB1Q16531 1140 aa20.58■□□□□ 0.88
TPM1-201ENST00000267996 RPAP2Q8IXW5 612 aaPredicted RBP20.58■□□□□ 0.88
TPM1-201ENST00000267996 ANKRD44Q8N8A2 993 aa20.58■□□□□ 0.88
TPM1-201ENST00000267996 PI4KAP1Q8N8J0 262 aa20.58■□□□□ 0.88
TPM1-201ENST00000267996 PIGBQ92521 554 aa20.58■□□□□ 0.88
TPM1-201ENST00000267996 ERBB4Q15303 1308 aa20.57■□□□□ 0.88
TPM1-201ENST00000267996 KSR2Q6VAB6 950 aa20.57■□□□□ 0.88
TPM1-201ENST00000267996 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.56■□□□□ 0.88
TPM1-201ENST00000267996 BCL9O00512 1426 aa20.56■□□□□ 0.88
TPM1-201ENST00000267996 BEND3Q5T5X7 828 aa20.56■□□□□ 0.88
TPM1-201ENST00000267996 GNAI3P08754 354 aa20.55■□□□□ 0.88
TPM1-201ENST00000267996 CEP85Q6P2H3 762 aa20.55■□□□□ 0.88
TPM1-201ENST00000267996 GCC1Q96CN9 775 aa20.54■□□□□ 0.88
TPM1-201ENST00000267996 SRCIN1Q9C0H9 1055 aa20.54■□□□□ 0.88
TPM1-201ENST00000267996 USP44Q9H0E7 712 aa20.54■□□□□ 0.88
TPM1-201ENST00000267996 CCDC9Q9Y3X0 531 aaKnown RBP20.54■□□□□ 0.88
TPM1-201ENST00000267996 DDX58O95786 925 aaKnown RBP20.54■□□□□ 0.88
TPM1-201ENST00000267996 ATG3Q9NT62 314 aa20.54■□□□□ 0.88
TPM1-201ENST00000267996 IBTKQ9P2D0 1353 aaPredicted RBP20.53■□□□□ 0.88
TPM1-201ENST00000267996 GNAI2P04899 355 aa20.53■□□□□ 0.88
TPM1-201ENST00000267996 RGS3P49796 1198 aa20.53■□□□□ 0.88
TPM1-201ENST00000267996 VSIG10Q8N0Z9 540 aa20.53■□□□□ 0.88
TPM1-201ENST00000267996 MAP3K2Q9Y2U5 619 aa20.53■□□□□ 0.88
TPM1-201ENST00000267996 NUCB1Q02818 461 aa20.52■□□□□ 0.88
TPM1-201ENST00000267996 MARCH10Q8NA82 808 aaPredicted RBP20.52■□□□□ 0.88
TPM1-201ENST00000267996 ASAP1Q9ULH1 1129 aa20.52■□□□□ 0.88
TPM1-201ENST00000267996 RBM19Q9Y4C8 960 aaKnown RBP20.52■□□□□ 0.88
TPM1-201ENST00000267996 PTCD1O75127 700 aaKnown RBP20.51■□□□□ 0.87
TPM1-201ENST00000267996 ALDH1L1O75891 902 aa20.51■□□□□ 0.87
TPM1-201ENST00000267996 XAGE3Q8WTP9 111 aa20.51■□□□□ 0.87
TPM1-201ENST00000267996 DCTPP1Q9H773 170 aa20.51■□□□□ 0.87
TPM1-201ENST00000267996 DOT1LQ8TEK3 1739 aa20.51■□□□□ 0.87
TPM1-201ENST00000267996 MYL6BP14649 208 aa20.51■□□□□ 0.87
TPM1-201ENST00000267996 USP21Q9UK80 565 aa20.51■□□□□ 0.87
TPM1-201ENST00000267996 NBPF26B4DH59 902 aa20.5■□□□□ 0.87
TPM1-201ENST00000267996 NBPF14Q5TI25 921 aa20.5■□□□□ 0.87
TPM1-201ENST00000267996 NBPF10Q6P3W6 841 aaKnown RBP20.5■□□□□ 0.87
TPM1-201ENST00000267996 COPS6Q7L5N1 327 aa20.5■□□□□ 0.87
TPM1-201ENST00000267996 NBPF15Q8N660 670 aa20.5■□□□□ 0.87
TPM1-201ENST00000267996 PDE4AP27815 886 aa20.49■□□□□ 0.87
TPM1-201ENST00000267996 TEX13AQ9BXU3 409 aaPredicted RBP20.49■□□□□ 0.87
TPM1-201ENST00000267996 PRIM1P49642 420 aaKnown RBP20.48■□□□□ 0.87
TPM1-201ENST00000267996 AIMP1Q12904 312 aaKnown RBP20.48■□□□□ 0.87
TPM1-201ENST00000267996 LINS1Q8NG48 757 aa20.48■□□□□ 0.87
TPM1-201ENST00000267996 BACH2Q9BYV9 841 aa20.48■□□□□ 0.87
TPM1-201ENST00000267996 UBTFL1P0CB47 393 aaPredicted RBP20.48■□□□□ 0.87
TPM1-201ENST00000267996 FAM98CQ17RN3 349 aaKnown RBP20.48■□□□□ 0.87
TPM1-201ENST00000267996 HMMRO75330 724 aa20.47■□□□□ 0.87
TPM1-201ENST00000267996 ANKRD13DQ6ZTN6 518 aa20.47■□□□□ 0.87
TPM1-201ENST00000267996 CHD1LQ86WJ1 897 aa20.47■□□□□ 0.87
TPM1-201ENST00000267996 ATP8B2P98198 1209 aa20.46■□□□□ 0.87
TPM1-201ENST00000267996 RIC3Q7Z5B4 369 aa20.46■□□□□ 0.87
TPM1-201ENST00000267996 METTL22Q9BUU2 404 aaPredicted RBP20.46■□□□□ 0.87
TPM1-201ENST00000267996 LRRFIP2Q9Y608 721 aaKnown RBP20.46■□□□□ 0.87
TPM1-201ENST00000267996 KAT6BQ8WYB5 2073 aa20.46■□□□□ 0.87
TPM1-201ENST00000267996 THSD7AQ9UPZ6 1657 aa20.45■□□□□ 0.86
TPM1-201ENST00000267996 A1BGP04217 495 aa20.45■□□□□ 0.86
TPM1-201ENST00000267996 PIP4K2AP48426 406 aaPredicted RBP20.45■□□□□ 0.86
TPM1-201ENST00000267996 UTYO14607 1347 aa20.45■□□□□ 0.86
TPM1-201ENST00000267996 IGKV5-2P06315 115 aa20.44■□□□□ 0.86
TPM1-201ENST00000267996 NBPF7P0C2Y1 421 aaPredicted RBP20.44■□□□□ 0.86
TPM1-201ENST00000267996 ANKRD45Q5TZF3 282 aa20.44■□□□□ 0.86
TPM1-201ENST00000267996 MEX3CQ5U5Q3 659 aaKnown RBP20.44■□□□□ 0.86
TPM1-201ENST00000267996 DNAJC10Q8IXB1 793 aa20.44■□□□□ 0.86
TPM1-201ENST00000267996 PLBD2Q8NHP8 589 aa20.44■□□□□ 0.86
TPM1-201ENST00000267996 SLC4A9Q96Q91 983 aa20.44■□□□□ 0.86
TPM1-201ENST00000267996 FAM161AQ3B820 660 aa20.43■□□□□ 0.86
TPM1-201ENST00000267996 SYTL4Q96C24 671 aaPredicted RBP20.43■□□□□ 0.86
TPM1-201ENST00000267996 AFF2P51816 1311 aa20.43■□□□□ 0.86
TPM1-201ENST00000267996 CWF19L2Q2TBE0 894 aaKnown RBP20.42■□□□□ 0.86
TPM1-201ENST00000267996 LNPKQ9C0E8 428 aa20.42■□□□□ 0.86
TPM1-201ENST00000267996 ARFGEF2Q9Y6D5 1785 aa20.42■□□□□ 0.86
TPM1-201ENST00000267996 ATRNO75882 1429 aa20.42■□□□□ 0.86
TPM1-201ENST00000267996 STARD3NLO95772 234 aa20.42■□□□□ 0.86
TPM1-201ENST00000267996 NEXNQ0ZGT2 675 aa20.42■□□□□ 0.86
TPM1-201ENST00000267996 C8orf34Q49A92 452 aa20.42■□□□□ 0.86
TPM1-201ENST00000267996 RBM42Q9BTD8 480 aaKnown RBP20.42■□□□□ 0.86
TPM1-201ENST00000267996 PNMA6EA0A0J9YXQ4 647 aa20.41■□□□□ 0.86
TPM1-201ENST00000267996 NEURL1BA8MQ27 555 aa20.41■□□□□ 0.86
TPM1-201ENST00000267996 GJD4Q96KN9 370 aaPredicted RBP20.41■□□□□ 0.86
TPM1-201ENST00000267996 HDAC5Q9UQL6 1122 aa20.41■□□□□ 0.86
TPM1-201ENST00000267996 GRM8O00222 908 aa20.4■□□□□ 0.86
TPM1-201ENST00000267996 SSH3Q8TE77 659 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms