RNA–Protein interactions for RNA: ENST00000266943.10

SLC46A3-201, Transcript of solute carrier family 46 member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC46A3, Length 3,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A3-201ENST00000266943 USP44Q9H0E7 712 aa17.84■□□□□ 0.45
SLC46A3-201ENST00000266943 PIP4K2AP48426 406 aaPredicted RBP17.84■□□□□ 0.45
SLC46A3-201ENST00000266943 DNAAF4Q8WXU2 420 aa17.84■□□□□ 0.45
SLC46A3-201ENST00000266943 ERVV-2B6SEH9 535 aa17.83■□□□□ 0.45
SLC46A3-201ENST00000266943 BEND3Q5T5X7 828 aa17.83■□□□□ 0.45
SLC46A3-201ENST00000266943 NPM2Q86SE8 214 aaKnown RBP17.83■□□□□ 0.45
SLC46A3-201ENST00000266943 RPAP2Q8IXW5 612 aaPredicted RBP17.83■□□□□ 0.45
SLC46A3-201ENST00000266943 DDX21Q9NR30 783 aaKnown RBP eCLIP17.83■□□□□ 0.45
SLC46A3-201ENST00000266943 FMNL2Q96PY5 1086 aa17.83■□□□□ 0.44
SLC46A3-201ENST00000266943 CHMP4AQ9BY43 222 aa17.83■□□□□ 0.44
SLC46A3-201ENST00000266943 DCTPP1Q9H773 170 aa17.83■□□□□ 0.44
SLC46A3-201ENST00000266943 MSH5O43196 834 aa17.82■□□□□ 0.44
SLC46A3-201ENST00000266943 SNRPA1P09661 255 aaKnown RBP17.82■□□□□ 0.44
SLC46A3-201ENST00000266943 MYL6BP14649 208 aa17.82■□□□□ 0.44
SLC46A3-201ENST00000266943 GNAI2P04899 355 aa17.82■□□□□ 0.44
SLC46A3-201ENST00000266943 SRCIN1Q9C0H9 1055 aa17.82■□□□□ 0.44
SLC46A3-201ENST00000266943 HYPKQ9NX55 129 aa17.82■□□□□ 0.44
SLC46A3-201ENST00000266943 MAP3K2Q9Y2U5 619 aa17.82■□□□□ 0.44
SLC46A3-201ENST00000266943 LRP10Q7Z4F1 713 aa17.81■□□□□ 0.44
SLC46A3-201ENST00000266943 AIMP1Q12904 312 aaKnown RBP17.81■□□□□ 0.44
SLC46A3-201ENST00000266943 LRRFIP2Q9Y608 721 aaKnown RBP17.81■□□□□ 0.44
SLC46A3-201ENST00000266943 NWD2Q9ULI1 1742 aa17.81■□□□□ 0.44
SLC46A3-201ENST00000266943 TNS2Q63HR2 1409 aa17.81■□□□□ 0.44
SLC46A3-201ENST00000266943 SEC24BO95487 1268 aa17.8■□□□□ 0.44
SLC46A3-201ENST00000266943 GNAI3P08754 354 aa17.8■□□□□ 0.44
SLC46A3-201ENST00000266943 PNMA6EA0A0J9YXQ4 647 aa17.79■□□□□ 0.44
SLC46A3-201ENST00000266943 NBPF7P0C2Y1 421 aaPredicted RBP17.79■□□□□ 0.44
SLC46A3-201ENST00000266943 KSR2Q6VAB6 950 aa17.79■□□□□ 0.44
SLC46A3-201ENST00000266943 SLIT2O94813 1529 aa17.78■□□□□ 0.44
SLC46A3-201ENST00000266943 ARFGEF2Q9Y6D5 1785 aa17.78■□□□□ 0.44
SLC46A3-201ENST00000266943 DOT1LQ8TEK3 1739 aa17.78■□□□□ 0.44
SLC46A3-201ENST00000266943 SPATA31A1Q5TZJ5 1347 aa17.78■□□□□ 0.44
SLC46A3-201ENST00000266943 UBTFL1P0CB47 393 aaPredicted RBP17.78■□□□□ 0.44
SLC46A3-201ENST00000266943 CWF19L2Q2TBE0 894 aaKnown RBP17.78■□□□□ 0.44
SLC46A3-201ENST00000266943 PTCD1O75127 700 aaKnown RBP17.77■□□□□ 0.44
SLC46A3-201ENST00000266943 XAGE3Q8WTP9 111 aa17.77■□□□□ 0.44
SLC46A3-201ENST00000266943 APBB1O00213 710 aa17.77■□□□□ 0.44
SLC46A3-201ENST00000266943 BCL11AQ9H165 835 aa17.77■□□□□ 0.44
SLC46A3-201ENST00000266943 SMARCA5O60264 1052 aaPredicted RBP17.77■□□□□ 0.43
SLC46A3-201ENST00000266943 LRP6O75581 1613 aa17.76■□□□□ 0.43
SLC46A3-201ENST00000266943 ANP32AP39687 249 aaKnown RBP17.76■□□□□ 0.43
SLC46A3-201ENST00000266943 COPS6Q7L5N1 327 aa17.76■□□□□ 0.43
SLC46A3-201ENST00000266943 PIGBQ92521 554 aa17.76■□□□□ 0.43
SLC46A3-201ENST00000266943 TMOD3Q9NYL9 352 aa17.76■□□□□ 0.43
SLC46A3-201ENST00000266943 C16orf71Q8IYS4 520 aaPredicted RBP17.76■□□□□ 0.43
SLC46A3-201ENST00000266943 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.75■□□□□ 0.43
SLC46A3-201ENST00000266943 ATP8B2P98198 1209 aa17.75■□□□□ 0.43
SLC46A3-201ENST00000266943 ASAP1Q9ULH1 1129 aa17.75■□□□□ 0.43
SLC46A3-201ENST00000266943 NBPF26B4DH59 902 aa17.75■□□□□ 0.43
SLC46A3-201ENST00000266943 NBPF14Q5TI25 921 aa17.75■□□□□ 0.43
SLC46A3-201ENST00000266943 NBPF10Q6P3W6 841 aaKnown RBP17.75■□□□□ 0.43
SLC46A3-201ENST00000266943 NBPF15Q8N660 670 aa17.75■□□□□ 0.43
SLC46A3-201ENST00000266943 OTUD7AQ8TE49 926 aaPredicted RBP17.75■□□□□ 0.43
SLC46A3-201ENST00000266943 AFDNP55196 1824 aaKnown RBP17.74■□□□□ 0.43
SLC46A3-201ENST00000266943 HMMRO75330 724 aa17.74■□□□□ 0.43
SLC46A3-201ENST00000266943 EXOC6BQ9Y2D4 811 aa17.74■□□□□ 0.43
SLC46A3-201ENST00000266943 NUP188Q5SRE5 1749 aa17.74■□□□□ 0.43
SLC46A3-201ENST00000266943 KAT6BQ8WYB5 2073 aa17.74■□□□□ 0.43
SLC46A3-201ENST00000266943 EXOC5O00471 708 aa17.73■□□□□ 0.43
SLC46A3-201ENST00000266943 IGKV5-2P06315 115 aa17.73■□□□□ 0.43
SLC46A3-201ENST00000266943 SPATA31A5Q5VU36 1347 aa17.73■□□□□ 0.43
SLC46A3-201ENST00000266943 SPATA31A7Q8IWB4 1347 aa17.73■□□□□ 0.43
SLC46A3-201ENST00000266943 DDX58O95786 925 aaKnown RBP17.73■□□□□ 0.43
SLC46A3-201ENST00000266943 RIC3Q7Z5B4 369 aa17.73■□□□□ 0.43
SLC46A3-201ENST00000266943 BCL9O00512 1426 aa17.72■□□□□ 0.43
SLC46A3-201ENST00000266943 A1BGP04217 495 aa17.72■□□□□ 0.43
SLC46A3-201ENST00000266943 ALDH1L1O75891 902 aa17.72■□□□□ 0.43
SLC46A3-201ENST00000266943 PLEKHM2Q8IWE5 1019 aa17.72■□□□□ 0.43
SLC46A3-201ENST00000266943 ATG3Q9NT62 314 aa17.72■□□□□ 0.43
SLC46A3-201ENST00000266943 JCADQ9P266 1359 aa17.71■□□□□ 0.43
SLC46A3-201ENST00000266943 LINS1Q8NG48 757 aa17.71■□□□□ 0.43
SLC46A3-201ENST00000266943 PPP1R42Q7Z4L9 355 aa17.71■□□□□ 0.43
SLC46A3-201ENST00000266943 C8orf37Q96NL8 207 aa17.7■□□□□ 0.42
SLC46A3-201ENST00000266943 IPO9Q96P70 1041 aaKnown RBP17.7■□□□□ 0.42
SLC46A3-201ENST00000266943 THRAP3Q9Y2W1 955 aaKnown RBP17.7■□□□□ 0.42
SLC46A3-201ENST00000266943 BCL9LQ86UU0 1499 aa17.7■□□□□ 0.42
SLC46A3-201ENST00000266943 ANKRD13DQ6ZTN6 518 aa17.7■□□□□ 0.42
SLC46A3-201ENST00000266943 SSH3Q8TE77 659 aa17.7■□□□□ 0.42
SLC46A3-201ENST00000266943 MYD88Q99836 296 aa17.7■□□□□ 0.42
SLC46A3-201ENST00000266943 CCDC9Q9Y3X0 531 aaKnown RBP17.7■□□□□ 0.42
SLC46A3-201ENST00000266943 IBTKQ9P2D0 1353 aaPredicted RBP17.7■□□□□ 0.42
SLC46A3-201ENST00000266943 GSPT1P15170 499 aaKnown RBP17.69■□□□□ 0.42
SLC46A3-201ENST00000266943 POLA2Q14181 598 aa17.69■□□□□ 0.42
SLC46A3-201ENST00000266943 METTL22Q9BUU2 404 aaPredicted RBP17.69■□□□□ 0.42
SLC46A3-201ENST00000266943 C9orf78Q9NZ63 289 aaPredicted RBP17.69■□□□□ 0.42
SLC46A3-201ENST00000266943 NEURL1BA8MQ27 555 aa17.69■□□□□ 0.42
SLC46A3-201ENST00000266943 BMP2KLQ5H9B9 411 aa17.69■□□□□ 0.42
SLC46A3-201ENST00000266943 DDB1Q16531 1140 aa17.69■□□□□ 0.42
SLC46A3-201ENST00000266943 KAZALD1Q96I82 304 aa17.69■□□□□ 0.42
SLC46A3-201ENST00000266943 TTLL7Q6ZT98 887 aa17.68■□□□□ 0.42
SLC46A3-201ENST00000266943 CERKQ8TCT0 537 aa17.68■□□□□ 0.42
SLC46A3-201ENST00000266943 SYTL4Q96C24 671 aaPredicted RBP17.68■□□□□ 0.42
SLC46A3-201ENST00000266943 UTYO14607 1347 aa17.68■□□□□ 0.42
SLC46A3-201ENST00000266943 ERBB4Q15303 1308 aa17.68■□□□□ 0.42
SLC46A3-201ENST00000266943 TJP1Q07157 1748 aa17.68■□□□□ 0.42
SLC46A3-201ENST00000266943 GRM8O00222 908 aa17.68■□□□□ 0.42
SLC46A3-201ENST00000266943 SRGAP3O43295 1099 aa17.68■□□□□ 0.42
SLC46A3-201ENST00000266943 SLC4A9Q96Q91 983 aa17.68■□□□□ 0.42
SLC46A3-201ENST00000266943 MARCH10Q8NA82 808 aaPredicted RBP17.67■□□□□ 0.42
SLC46A3-201ENST00000266943 SUCLG2Q96I99 432 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms