RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 STX1AQ16623 288 aa17.66■□□□□ 0.42
CASC3-201ENST00000264645 GPATCH8Q9UKJ3 1502 aaKnown RBP17.66■□□□□ 0.42
CASC3-201ENST00000264645 GTF2A1P52655 376 aaPredicted RBP17.65■□□□□ 0.42
CASC3-201ENST00000264645 RIC3Q7Z5B4 369 aa17.65■□□□□ 0.42
CASC3-201ENST00000264645 CCDC69A6NI79 296 aa17.65■□□□□ 0.42
CASC3-201ENST00000264645 C1orf141Q5JVX7 400 aa17.65■□□□□ 0.42
CASC3-201ENST00000264645 ISM2Q6H9L7 571 aa17.65■□□□□ 0.42
CASC3-201ENST00000264645 TOP1P11387 765 aaKnown RBP17.65■□□□□ 0.42
CASC3-201ENST00000264645 NAP1L1P55209 391 aaKnown RBP17.65■□□□□ 0.42
CASC3-201ENST00000264645 SYNJ2O15056 1496 aa17.64■□□□□ 0.42
CASC3-201ENST00000264645 KIAA0754O94854 1291 aa17.64■□□□□ 0.41
CASC3-201ENST00000264645 CASQ1P31415 396 aa17.64■□□□□ 0.41
CASC3-201ENST00000264645 FILIP1LQ4L180 1135 aa17.64■□□□□ 0.41
CASC3-201ENST00000264645 ERC1Q8IUD2 1116 aa17.64■□□□□ 0.41
CASC3-201ENST00000264645 JARID2Q92833 1246 aaPredicted RBP17.64■□□□□ 0.41
CASC3-201ENST00000264645 CTAGE5O15320 804 aa17.64■□□□□ 0.41
CASC3-201ENST00000264645 GNG11P61952 73 aa17.64■□□□□ 0.41
CASC3-201ENST00000264645 ELF2Q15723 593 aa17.64■□□□□ 0.41
CASC3-201ENST00000264645 NUTM2GQ5VZR2 741 aa17.64■□□□□ 0.41
CASC3-201ENST00000264645 AK2P54819 239 aa17.64■□□□□ 0.41
CASC3-201ENST00000264645 MCM6Q14566 821 aa17.64■□□□□ 0.41
CASC3-201ENST00000264645 CCDC191Q8NCU4 936 aa17.64■□□□□ 0.41
CASC3-201ENST00000264645 IQGAP2Q13576 1575 aa17.64■□□□□ 0.41
CASC3-201ENST00000264645 KIF4BQ2VIQ3 1234 aa17.63■□□□□ 0.41
CASC3-201ENST00000264645 LRRFIP1Q32MZ4 808 aaKnown RBP17.63■□□□□ 0.41
CASC3-201ENST00000264645 DHX37Q8IY37 1157 aaKnown RBP17.63■□□□□ 0.41
CASC3-201ENST00000264645 CSB-PGBD3P0DP91 1061 aa17.63■□□□□ 0.41
CASC3-201ENST00000264645 CPA1P15085 419 aa17.63■□□□□ 0.41
CASC3-201ENST00000264645 FAM173BQ6P4H8 233 aa17.63■□□□□ 0.41
CASC3-201ENST00000264645 SYT10Q6XYQ8 523 aa17.63■□□□□ 0.41
CASC3-201ENST00000264645 ARFGAP3Q9NP61 516 aa17.63■□□□□ 0.41
CASC3-201ENST00000264645 DNMBPQ6XZF7 1577 aa17.63■□□□□ 0.41
CASC3-201ENST00000264645 CAVIN2O95810 425 aa17.63■□□□□ 0.41
CASC3-201ENST00000264645 JMYQ8N9B5 988 aa17.63■□□□□ 0.41
CASC3-201ENST00000264645 SMARCE1Q969G3 411 aa17.63■□□□□ 0.41
CASC3-201ENST00000264645 BOLA2Q9H3K6 86 aa17.63■□□□□ 0.41
CASC3-201ENST00000264645 BRD1O95696 1058 aa17.62■□□□□ 0.41
CASC3-201ENST00000264645 USP8P40818 1118 aa17.62■□□□□ 0.41
CASC3-201ENST00000264645 CEP85Q6P2H3 762 aa17.62■□□□□ 0.41
CASC3-201ENST00000264645 CCAR1Q8IX12 1150 aaKnown RBP17.62■□□□□ 0.41
CASC3-201ENST00000264645 ATAD2Q6PL18 1390 aa17.62■□□□□ 0.41
CASC3-201ENST00000264645 CENPHQ9H3R5 247 aa17.62■□□□□ 0.41
CASC3-201ENST00000264645 ARHGEF12Q9NZN5 1544 aa17.62■□□□□ 0.41
CASC3-201ENST00000264645 DHX16O60231 1041 aaKnown RBP17.62■□□□□ 0.41
CASC3-201ENST00000264645 LRMPQ12912 555 aa17.62■□□□□ 0.41
CASC3-201ENST00000264645 KRT32Q14532 448 aa17.61■□□□□ 0.41
CASC3-201ENST00000264645 CUL7Q14999 1698 aa17.61■□□□□ 0.41
CASC3-201ENST00000264645 GSPT1P15170 499 aaKnown RBP17.61■□□□□ 0.41
CASC3-201ENST00000264645 KRT24Q2M2I5 525 aa17.61■□□□□ 0.41
CASC3-201ENST00000264645 MAGI1Q96QZ7 1491 aaPredicted RBP17.6■□□□□ 0.41
CASC3-201ENST00000264645 KIAA0586Q9BVV6 1533 aa17.6■□□□□ 0.41
CASC3-201ENST00000264645 ERO1AQ96HE7 468 aa17.6■□□□□ 0.41
CASC3-201ENST00000264645 RSPH14Q9UHP6 348 aa17.6■□□□□ 0.41
CASC3-201ENST00000264645 PYCARDQ9ULZ3 195 aa17.6■□□□□ 0.41
CASC3-201ENST00000264645 ZMYM3Q14202 1370 aa17.6■□□□□ 0.41
CASC3-201ENST00000264645 AOPEPQ8N6M6 819 aa17.6■□□□□ 0.41
CASC3-201ENST00000264645 NSFL1CQ9UNZ2 370 aaKnown RBP17.6■□□□□ 0.41
CASC3-201ENST00000264645 IBTKQ9P2D0 1353 aaPredicted RBP17.6■□□□□ 0.41
CASC3-201ENST00000264645 CRACR2AQ9BSW2 395 aa17.59■□□□□ 0.41
CASC3-201ENST00000264645 RASSF4Q9H2L5 321 aa17.59■□□□□ 0.41
CASC3-201ENST00000264645 CHMLP26374 656 aa17.59■□□□□ 0.41
CASC3-201ENST00000264645 PTPRCP08575 1304 aa17.59■□□□□ 0.41
CASC3-201ENST00000264645 NPHP3Q7Z494 1330 aa17.59■□□□□ 0.41
CASC3-201ENST00000264645 CCT2P78371 535 aaKnown RBP17.59■□□□□ 0.41
CASC3-201ENST00000264645 KIF14Q15058 1648 aa17.58■□□□□ 0.41
CASC3-201ENST00000264645 SLC3A2P08195 630 aaKnown RBP17.58■□□□□ 0.41
CASC3-201ENST00000264645 CAPN2P17655 700 aa17.58■□□□□ 0.41
CASC3-201ENST00000264645 CDR1P51861 262 aa17.58■□□□□ 0.41
CASC3-201ENST00000264645 NME9Q86XW9 330 aa17.58■□□□□ 0.41
CASC3-201ENST00000264645 CPLX3Q8WVH0 158 aa17.58■□□□□ 0.41
CASC3-201ENST00000264645 EPB41L2O43491 1005 aaKnown RBP17.58■□□□□ 0.4
CASC3-201ENST00000264645 SYTL4Q96C24 671 aaPredicted RBP17.58■□□□□ 0.4
CASC3-201ENST00000264645 CCDC8Q9H0W5 538 aaPredicted RBP17.58■□□□□ 0.4
CASC3-201ENST00000264645 FLIIQ13045 1269 aa17.58■□□□□ 0.4
CASC3-201ENST00000264645 GBP3Q9H0R5 595 aa17.58■□□□□ 0.4
CASC3-201ENST00000264645 FYB1O15117 783 aa17.57■□□□□ 0.4
CASC3-201ENST00000264645 USP16Q9Y5T5 823 aa17.57■□□□□ 0.4
CASC3-201ENST00000264645 KRBA2Q6ZNG9 492 aa17.57■□□□□ 0.4
CASC3-201ENST00000264645 HSP90AA4PQ58FG1 418 aa17.57■□□□□ 0.4
CASC3-201ENST00000264645 PPP1R42Q7Z4L9 355 aa17.57■□□□□ 0.4
CASC3-201ENST00000264645 CCDC150Q8NCX0 1101 aa17.57■□□□□ 0.4
CASC3-201ENST00000264645 CCDC12Q8WUD4 166 aaPredicted RBP17.57■□□□□ 0.4
CASC3-201ENST00000264645 PHACTR3Q96KR7 559 aa17.57■□□□□ 0.4
CASC3-201ENST00000264645 TRIM35Q9UPQ4 493 aa17.57■□□□□ 0.4
CASC3-201ENST00000264645 KIF5CO60282 957 aa17.57■□□□□ 0.4
CASC3-201ENST00000264645 NLRP6P59044 892 aa17.57■□□□□ 0.4
CASC3-201ENST00000264645 ZNF215Q9UL58 517 aaPredicted RBP17.57■□□□□ 0.4
CASC3-201ENST00000264645 BICRAQ9NZM4 1560 aa17.56■□□□□ 0.4
CASC3-201ENST00000264645 MNAT1P51948 309 aa17.56■□□□□ 0.4
CASC3-201ENST00000264645 PHACTR2O75167 634 aa17.56■□□□□ 0.4
CASC3-201ENST00000264645 ATP2B3Q16720 1220 aa17.56■□□□□ 0.4
CASC3-201ENST00000264645 CBX8Q9HC52 389 aa17.56■□□□□ 0.4
CASC3-201ENST00000264645 TXNDC2Q86VQ3 553 aa17.56■□□□□ 0.4
CASC3-201ENST00000264645 KDM6BO15054 1643 aa17.55■□□□□ 0.4
CASC3-201ENST00000264645 LMOD1P29536 600 aaPredicted RBP17.55■□□□□ 0.4
CASC3-201ENST00000264645 TAF7Q15545 349 aaPredicted RBP17.55■□□□□ 0.4
CASC3-201ENST00000264645 NUP160Q12769 1436 aa17.55■□□□□ 0.4
CASC3-201ENST00000264645 SMARCC1Q92922 1105 aaPredicted RBP17.55■□□□□ 0.4
CASC3-201ENST00000264645 RNF216Q9NWF9 866 aaPredicted RBP17.55■□□□□ 0.4
CASC3-201ENST00000264645 RHPN1Q8TCX5 695 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms