RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 NGEFQ8N5V2 710 aa12.5□□□□□ -0.41
TTC39A-201ENST00000262675 TJP1Q07157 1748 aa12.5□□□□□ -0.41
TTC39A-201ENST00000262675 A0A0G2JLW4 131 aa12.5□□□□□ -0.41
TTC39A-201ENST00000262675 CRKLP46109 303 aaKnown RBP12.5□□□□□ -0.41
TTC39A-201ENST00000262675 USP42Q9H9J4 1324 aaKnown RBP12.49□□□□□ -0.41
TTC39A-201ENST00000262675 DPEP1P16444 411 aa12.49□□□□□ -0.41
TTC39A-201ENST00000262675 DALRD3Q5D0E6 543 aaKnown RBP12.49□□□□□ -0.41
TTC39A-201ENST00000262675 AMER1Q5JTC6 1135 aaPredicted RBP12.49□□□□□ -0.41
TTC39A-201ENST00000262675 SULT6B1Q6IMI4 303 aa12.49□□□□□ -0.41
TTC39A-201ENST00000262675 NFATC2IPQ8NCF5 419 aa12.49□□□□□ -0.41
TTC39A-201ENST00000262675 MRC1P22897 1456 aa12.48□□□□□ -0.41
TTC39A-201ENST00000262675 PTCD1O75127 700 aaKnown RBP12.48□□□□□ -0.41
TTC39A-201ENST00000262675 ZPR1O75312 459 aa12.48□□□□□ -0.41
TTC39A-201ENST00000262675 KDM2BQ8NHM5 1336 aa12.48□□□□□ -0.41
TTC39A-201ENST00000262675 ZC3H4Q9UPT8 1303 aaKnown RBP12.48□□□□□ -0.41
TTC39A-201ENST00000262675 PPP2R1AP30153 589 aa12.47□□□□□ -0.41
TTC39A-201ENST00000262675 IL13P35225 146 aa12.47□□□□□ -0.41
TTC39A-201ENST00000262675 WDR43Q15061 677 aaKnown RBP eCLIP12.47□□□□□ -0.41
TTC39A-201ENST00000262675 C16orf71Q8IYS4 520 aaPredicted RBP12.47□□□□□ -0.41
TTC39A-201ENST00000262675 RBM46Q8TBY0 533 aaKnown RBP12.47□□□□□ -0.41
TTC39A-201ENST00000262675 WWC3Q9ULE0 1092 aa12.47□□□□□ -0.41
TTC39A-201ENST00000262675 SLC52A2Q9HAB3 445 aa12.47□□□□□ -0.41
TTC39A-201ENST00000262675 TCERG1O14776 1098 aaKnown RBP12.46□□□□□ -0.41
TTC39A-201ENST00000262675 FSTL1Q12841 308 aa12.46□□□□□ -0.41
TTC39A-201ENST00000262675 AEBP1Q8IUX7 1158 aa12.46□□□□□ -0.41
TTC39A-201ENST00000262675 VSIG10Q8N0Z9 540 aa12.46□□□□□ -0.41
TTC39A-201ENST00000262675 TNRC6CQ9HCJ0 1690 aaKnown RBP12.46□□□□□ -0.42
TTC39A-201ENST00000262675 KCNA3P22001 575 aa12.46□□□□□ -0.42
TTC39A-201ENST00000262675 VIRMAQ69YN4 1812 aaKnown RBP12.45□□□□□ -0.42
TTC39A-201ENST00000262675 ADAMTS7Q9UKP4 1686 aa12.45□□□□□ -0.42
TTC39A-201ENST00000262675 C9orf131Q5VYM1 1079 aa12.45□□□□□ -0.42
TTC39A-201ENST00000262675 MS4A1P11836 297 aa12.45□□□□□ -0.42
TTC39A-201ENST00000262675 TM4SF1P30408 202 aa12.45□□□□□ -0.42
TTC39A-201ENST00000262675 INTS5Q6P9B9 1019 aaKnown RBP12.45□□□□□ -0.42
TTC39A-201ENST00000262675 PDZRN3Q9UPQ7 1066 aa12.45□□□□□ -0.42
TTC39A-201ENST00000262675 SOS1Q07889 1333 aaPredicted RBP12.44□□□□□ -0.42
TTC39A-201ENST00000262675 NRXN2Q9P2S2 1712 aa12.44□□□□□ -0.42
TTC39A-201ENST00000262675 POLRMTO00411 1230 aaKnown RBP12.44□□□□□ -0.42
TTC39A-201ENST00000262675 A0A087WZG4 1122 aa12.43□□□□□ -0.42
TTC39A-201ENST00000262675 RNMTO43148 476 aaKnown RBP12.43□□□□□ -0.42
TTC39A-201ENST00000262675 DDR1Q08345 913 aa12.43□□□□□ -0.42
TTC39A-201ENST00000262675 SRP68Q9UHB9 627 aaKnown RBP12.43□□□□□ -0.42
TTC39A-201ENST00000262675 NARFQ9UHQ1 456 aa12.43□□□□□ -0.42
TTC39A-201ENST00000262675 ADAMTS8Q9UP79 889 aa12.43□□□□□ -0.42
TTC39A-201ENST00000262675 DLEC1Q9Y238 1755 aa12.43□□□□□ -0.42
TTC39A-201ENST00000262675 ANP32AP39687 249 aaKnown RBP12.43□□□□□ -0.42
TTC39A-201ENST00000262675 WDR90Q96KV7 1748 aa12.43□□□□□ -0.42
TTC39A-201ENST00000262675 SBF1O95248 1867 aa12.43□□□□□ -0.42
TTC39A-201ENST00000262675 CYP19A1P11511 503 aaPredicted RBP12.42□□□□□ -0.42
TTC39A-201ENST00000262675 DNAJC10Q8IXB1 793 aa12.42□□□□□ -0.42
TTC39A-201ENST00000262675 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.42□□□□□ -0.42
TTC39A-201ENST00000262675 TEX13AQ9BXU3 409 aaPredicted RBP12.42□□□□□ -0.42
TTC39A-201ENST00000262675 COL15A1P39059 1388 aa12.42□□□□□ -0.42
TTC39A-201ENST00000262675 UBR2Q8IWV8 1755 aa12.42□□□□□ -0.42
TTC39A-201ENST00000262675 EXOC6Q8TAG9 804 aa12.42□□□□□ -0.42
TTC39A-201ENST00000262675 RNF181Q9P0P0 153 aa12.42□□□□□ -0.42
TTC39A-201ENST00000262675 ZNF521Q96K83 1311 aa12.42□□□□□ -0.42
TTC39A-201ENST00000262675 KCPQ6ZWJ8 1503 aa12.41□□□□□ -0.42
TTC39A-201ENST00000262675 AFDNP55196 1824 aaKnown RBP12.41□□□□□ -0.42
TTC39A-201ENST00000262675 DIAPH1O60610 1272 aaKnown RBP12.41□□□□□ -0.42
TTC39A-201ENST00000262675 STARD3NLO95772 234 aa12.41□□□□□ -0.42
TTC39A-201ENST00000262675 USPL1Q5W0Q7 1092 aa12.41□□□□□ -0.42
TTC39A-201ENST00000262675 NMRK2Q9NPI5 230 aa12.41□□□□□ -0.42
TTC39A-201ENST00000262675 GOLGB1Q14789 3259 aaKnown RBP12.41□□□□□ -0.42
TTC39A-201ENST00000262675 GOLGA2Q08379 1002 aa12.4□□□□□ -0.42
TTC39A-201ENST00000262675 TTC5Q8N0Z6 440 aa12.4□□□□□ -0.42
TTC39A-201ENST00000262675 CDCA7LQ96GN5 454 aa12.4□□□□□ -0.42
TTC39A-201ENST00000262675 DNAJC5GQ8N7S2 189 aa12.39□□□□□ -0.43
TTC39A-201ENST00000262675 SMC1BQ8NDV3 1235 aa12.39□□□□□ -0.43
TTC39A-201ENST00000262675 LGR6Q9HBX8 967 aa12.39□□□□□ -0.43
TTC39A-201ENST00000262675 SALL2Q9Y467 1007 aaPredicted RBP12.39□□□□□ -0.43
TTC39A-201ENST00000262675 LMNB1P20700 586 aa12.39□□□□□ -0.43
TTC39A-201ENST00000262675 NFIXQ14938 502 aa12.39□□□□□ -0.43
TTC39A-201ENST00000262675 TTLL6Q8N841 843 aa12.39□□□□□ -0.43
TTC39A-201ENST00000262675 H0YIN7 160 aa12.38□□□□□ -0.43
TTC39A-201ENST00000262675 SERPINB2P05120 415 aa12.38□□□□□ -0.43
TTC39A-201ENST00000262675 CHRNA5P30532 468 aa12.38□□□□□ -0.43
TTC39A-201ENST00000262675 GAS2L2Q8NHY3 880 aa12.38□□□□□ -0.43
TTC39A-201ENST00000262675 NOP58Q9Y2X3 529 aaKnown RBP12.38□□□□□ -0.43
TTC39A-201ENST00000262675 MTHFSDQ2M296 383 aaKnown RBP12.37□□□□□ -0.43
TTC39A-201ENST00000262675 DUSP27Q5VZP5 1158 aa12.37□□□□□ -0.43
TTC39A-201ENST00000262675 IPO9Q96P70 1041 aaKnown RBP12.37□□□□□ -0.43
TTC39A-201ENST00000262675 HMOX1P09601 288 aa12.37□□□□□ -0.43
TTC39A-201ENST00000262675 NPM2Q86SE8 214 aaKnown RBP12.37□□□□□ -0.43
TTC39A-201ENST00000262675 KLRG1Q96E93 195 aa12.37□□□□□ -0.43
TTC39A-201ENST00000262675 ZBTB1Q9Y2K1 713 aa12.37□□□□□ -0.43
TTC39A-201ENST00000262675 PDE6BP35913 854 aa12.36□□□□□ -0.43
TTC39A-201ENST00000262675 TEFQ10587 303 aa12.36□□□□□ -0.43
TTC39A-201ENST00000262675 SLC39A6Q13433 755 aa12.36□□□□□ -0.43
TTC39A-201ENST00000262675 TRMT2AQ8IZ69 625 aaKnown RBP12.36□□□□□ -0.43
TTC39A-201ENST00000262675 JMYQ8N9B5 988 aa12.36□□□□□ -0.43
TTC39A-201ENST00000262675 SCN7AQ01118 1682 aa12.36□□□□□ -0.43
TTC39A-201ENST00000262675 GLTPD2A6NH11 291 aa12.36□□□□□ -0.43
TTC39A-201ENST00000262675 GNAT3A8MTJ3 354 aa12.36□□□□□ -0.43
TTC39A-201ENST00000262675 VEGFAP15692 232 aaPredicted RBP12.36□□□□□ -0.43
TTC39A-201ENST00000262675 EIF5P55010 431 aaKnown RBP12.36□□□□□ -0.43
TTC39A-201ENST00000262675 SLFN5Q08AF3 891 aa12.36□□□□□ -0.43
TTC39A-201ENST00000262675 NCBP3Q53F19 620 aaKnown RBP12.36□□□□□ -0.43
TTC39A-201ENST00000262675 C2CD5Q86YS7 1000 aa12.36□□□□□ -0.43
TTC39A-201ENST00000262675 RRAGCQ9HB90 399 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms