RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 ADCY5O95622 1261 aa21.66■■□□□ 1.06
TRAF4-201ENST00000262395 SLC26A8Q96RN1 970 aa21.66■■□□□ 1.06
TRAF4-201ENST00000262395 ESF1Q9H501 851 aaKnown RBP21.66■■□□□ 1.06
TRAF4-201ENST00000262395 PHF14O94880 888 aa21.65■■□□□ 1.06
TRAF4-201ENST00000262395 LARGE1O95461 756 aa21.65■■□□□ 1.06
TRAF4-201ENST00000262395 SYT1P21579 422 aa21.65■■□□□ 1.06
TRAF4-201ENST00000262395 GIMAP6Q6P9H5 292 aa21.65■■□□□ 1.06
TRAF4-201ENST00000262395 USHBP1Q8N6Y0 703 aa21.65■■□□□ 1.06
TRAF4-201ENST00000262395 AKAP12Q02952 1782 aa21.65■■□□□ 1.06
TRAF4-201ENST00000262395 SRGAP3O43295 1099 aa21.64■■□□□ 1.06
TRAF4-201ENST00000262395 PLEKHG5O94827 1062 aa21.64■■□□□ 1.06
TRAF4-201ENST00000262395 RUFY3Q7L099 469 aa21.64■■□□□ 1.06
TRAF4-201ENST00000262395 PLPPR3Q6T4P5 718 aa21.64■■□□□ 1.05
TRAF4-201ENST00000262395 IL17REQ8NFR9 667 aa21.64■■□□□ 1.05
TRAF4-201ENST00000262395 CHMP3Q9Y3E7 222 aa21.64■■□□□ 1.05
TRAF4-201ENST00000262395 USP6P35125 1406 aa21.63■■□□□ 1.05
TRAF4-201ENST00000262395 DYNC1I1O14576 645 aa21.63■■□□□ 1.05
TRAF4-201ENST00000262395 ANXA1P04083 346 aa21.63■■□□□ 1.05
TRAF4-201ENST00000262395 ZSCAN22P10073 491 aaPredicted RBP21.63■■□□□ 1.05
TRAF4-201ENST00000262395 RHPN1Q8TCX5 695 aa21.63■■□□□ 1.05
TRAF4-201ENST00000262395 SOS1Q07889 1333 aaPredicted RBP21.63■■□□□ 1.05
TRAF4-201ENST00000262395 NGDNQ8NEJ9 315 aaKnown RBP21.63■■□□□ 1.05
TRAF4-201ENST00000262395 GNAT3A8MTJ3 354 aa21.62■■□□□ 1.05
TRAF4-201ENST00000262395 STX6O43752 255 aa21.62■■□□□ 1.05
TRAF4-201ENST00000262395 NBPF7P0C2Y1 421 aaPredicted RBP21.62■■□□□ 1.05
TRAF4-201ENST00000262395 CCDC183Q5T5S1 534 aa21.62■■□□□ 1.05
TRAF4-201ENST00000262395 HDGFL1Q5TGJ6 251 aa21.62■■□□□ 1.05
TRAF4-201ENST00000262395 CCDC83Q8IWF9 413 aa21.62■■□□□ 1.05
TRAF4-201ENST00000262395 PI4K2BQ8TCG2 481 aa21.62■■□□□ 1.05
TRAF4-201ENST00000262395 PRDM10Q9NQV6 1147 aa21.62■■□□□ 1.05
TRAF4-201ENST00000262395 CEP170BQ9Y4F5 1589 aaPredicted RBP21.62■■□□□ 1.05
TRAF4-201ENST00000262395 CASTP20810 708 aaKnown RBP21.62■■□□□ 1.05
TRAF4-201ENST00000262395 SMC3Q9UQE7 1217 aa21.62■■□□□ 1.05
TRAF4-201ENST00000262395 SGSM2O43147 1006 aa21.62■■□□□ 1.05
TRAF4-201ENST00000262395 ARHGEF10O15013 1369 aa21.61■■□□□ 1.05
TRAF4-201ENST00000262395 PLEKHG3A1L390 1219 aa21.61■■□□□ 1.05
TRAF4-201ENST00000262395 DNM1Q05193 864 aaKnown RBP21.6■■□□□ 1.05
TRAF4-201ENST00000262395 SSH3Q8TE77 659 aa21.6■■□□□ 1.05
TRAF4-201ENST00000262395 LSG1Q9H089 658 aaKnown RBP21.6■■□□□ 1.05
TRAF4-201ENST00000262395 RAD50Q92878 1312 aa21.6■■□□□ 1.05
TRAF4-201ENST00000262395 SSH2Q76I76 1423 aa21.6■■□□□ 1.05
TRAF4-201ENST00000262395 NOLC1Q14978 699 aaKnown RBP eCLIP21.6■■□□□ 1.05
TRAF4-201ENST00000262395 OS9Q13438 667 aaPredicted RBP21.59■■□□□ 1.05
TRAF4-201ENST00000262395 TTC14Q96N46 770 aa21.59■■□□□ 1.05
TRAF4-201ENST00000262395 TSPOAP1O95153 1857 aa21.59■■□□□ 1.05
TRAF4-201ENST00000262395 LIMCH1Q9UPQ0 1083 aa21.59■■□□□ 1.05
TRAF4-201ENST00000262395 NLRP6P59044 892 aa21.59■■□□□ 1.05
TRAF4-201ENST00000262395 ADCK5Q3MIX3 580 aa21.59■■□□□ 1.05
TRAF4-201ENST00000262395 SPC24Q8NBT2 197 aa21.59■■□□□ 1.05
TRAF4-201ENST00000262395 SPATA31D1Q6ZQQ2 1576 aa21.59■■□□□ 1.05
TRAF4-201ENST00000262395 FLT4P35916 1363 aa21.58■■□□□ 1.05
TRAF4-201ENST00000262395 VPS37CA5D8V6 355 aaPredicted RBP21.58■■□□□ 1.05
TRAF4-201ENST00000262395 F13A1P00488 732 aa21.58■■□□□ 1.05
TRAF4-201ENST00000262395 TUBGCP6Q96RT7 1819 aa21.58■■□□□ 1.05
TRAF4-201ENST00000262395 PTH1RQ03431 593 aa21.58■■□□□ 1.04
TRAF4-201ENST00000262395 NECAB1Q8N987 351 aa21.58■■□□□ 1.04
TRAF4-201ENST00000262395 MAP7D2Q96T17 732 aa21.58■■□□□ 1.04
TRAF4-201ENST00000262395 AP5Z1O43299 807 aa21.57■■□□□ 1.04
TRAF4-201ENST00000262395 GJB2P29033 226 aa21.57■■□□□ 1.04
TRAF4-201ENST00000262395 IGSF1Q8N6C5 1336 aa21.57■■□□□ 1.04
TRAF4-201ENST00000262395 UBE2HP62256 183 aa21.57■■□□□ 1.04
TRAF4-201ENST00000262395 TAF7Q15545 349 aaPredicted RBP21.57■■□□□ 1.04
TRAF4-201ENST00000262395 CNTROBQ8N137 903 aa21.57■■□□□ 1.04
TRAF4-201ENST00000262395 SIRT1Q96EB6 747 aa21.57■■□□□ 1.04
TRAF4-201ENST00000262395 RGPD1P0DJD0 1748 aa21.57■■□□□ 1.04
TRAF4-201ENST00000262395 A0A0U1RQG5 324 aaPredicted RBP21.56■■□□□ 1.04
TRAF4-201ENST00000262395 HDGFP51858 240 aaKnown RBP21.56■■□□□ 1.04
TRAF4-201ENST00000262395 PRPF40BQ6NWY9 871 aaKnown RBP21.56■■□□□ 1.04
TRAF4-201ENST00000262395 USP31Q70CQ4 1352 aa21.56■■□□□ 1.04
TRAF4-201ENST00000262395 PIBF1Q8WXW3 757 aa21.56■■□□□ 1.04
TRAF4-201ENST00000262395 JAKMIP1Q96N16 626 aaKnown RBP21.56■■□□□ 1.04
TRAF4-201ENST00000262395 LTKP29376 864 aa21.56■■□□□ 1.04
TRAF4-201ENST00000262395 FAM184AQ8NB25 1140 aa21.56■■□□□ 1.04
TRAF4-201ENST00000262395 COL9A3Q14050 684 aaPredicted RBP21.56■■□□□ 1.04
TRAF4-201ENST00000262395 FAM173BQ6P4H8 233 aa21.56■■□□□ 1.04
TRAF4-201ENST00000262395 C14orf37Q86TY3 774 aa21.56■■□□□ 1.04
TRAF4-201ENST00000262395 FERMT3Q86UX7 667 aa21.56■■□□□ 1.04
TRAF4-201ENST00000262395 SBNO1A3KN83 1393 aa21.55■■□□□ 1.04
TRAF4-201ENST00000262395 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.55■■□□□ 1.04
TRAF4-201ENST00000262395 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.55■■□□□ 1.04
TRAF4-201ENST00000262395 PI4KAP2A4QPH2 592 aa21.55■■□□□ 1.04
TRAF4-201ENST00000262395 PI4KAP1Q8N8J0 262 aa21.55■■□□□ 1.04
TRAF4-201ENST00000262395 DIAPH3Q9NSV4 1193 aa21.55■■□□□ 1.04
TRAF4-201ENST00000262395 PRDM4Q9UKN5 801 aa21.55■■□□□ 1.04
TRAF4-201ENST00000262395 TECPR2O15040 1411 aa21.54■■□□□ 1.04
TRAF4-201ENST00000262395 KDM4AO75164 1064 aa21.54■■□□□ 1.04
TRAF4-201ENST00000262395 UVSSAQ2YD98 709 aa21.54■■□□□ 1.04
TRAF4-201ENST00000262395 MYRIPQ8NFW9 859 aa21.54■■□□□ 1.04
TRAF4-201ENST00000262395 KIF1BPQ96EK5 621 aa21.54■■□□□ 1.04
TRAF4-201ENST00000262395 TMEM87AQ8NBN3 555 aa21.54■■□□□ 1.04
TRAF4-201ENST00000262395 CHPF2Q9P2E5 772 aa21.54■■□□□ 1.04
TRAF4-201ENST00000262395 KDRP35968 1356 aa21.54■■□□□ 1.04
TRAF4-201ENST00000262395 KCNQ3O43525 872 aa21.53■■□□□ 1.04
TRAF4-201ENST00000262395 TCEANC2Q96MN5 208 aa21.53■■□□□ 1.04
TRAF4-201ENST00000262395 RAB11FIP3O75154 756 aa21.53■■□□□ 1.04
TRAF4-201ENST00000262395 CAMK4Q16566 473 aa21.53■■□□□ 1.04
TRAF4-201ENST00000262395 PDRG1Q9NUG6 133 aa21.53■■□□□ 1.04
TRAF4-201ENST00000262395 HYPKQ9NX55 129 aa21.53■■□□□ 1.04
TRAF4-201ENST00000262395 PPP6R1Q9UPN7 881 aa21.53■■□□□ 1.04
TRAF4-201ENST00000262395 PA2G4Q9UQ80 394 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms