RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 RPAP1Q9BWH6 1393 aaPredicted RBP21.04■□□□□ 0.96
TRAM1-201ENST00000262213 CWC27Q6UX04 472 aaKnown RBP21.04■□□□□ 0.96
TRAM1-201ENST00000262213 PPP1R42Q7Z4L9 355 aa21.04■□□□□ 0.96
TRAM1-201ENST00000262213 RASEFQ8IZ41 740 aa21.04■□□□□ 0.96
TRAM1-201ENST00000262213 AK2P54819 239 aa21.03■□□□□ 0.96
TRAM1-201ENST00000262213 DDX54Q8TDD1 881 aaKnown RBP21.03■□□□□ 0.96
TRAM1-201ENST00000262213 SNX14Q9Y5W7 946 aa21.03■□□□□ 0.96
TRAM1-201ENST00000262213 CCDC183Q5T5S1 534 aa21.03■□□□□ 0.96
TRAM1-201ENST00000262213 FAM177BA6PVY3 158 aa21.02■□□□□ 0.96
TRAM1-201ENST00000262213 EIF2S2P20042 333 aaKnown RBP21.02■□□□□ 0.96
TRAM1-201ENST00000262213 MAP7D2Q96T17 732 aa21.02■□□□□ 0.96
TRAM1-201ENST00000262213 SPATA31D1Q6ZQQ2 1576 aa21.02■□□□□ 0.96
TRAM1-201ENST00000262213 ZSCAN22P10073 491 aaPredicted RBP21.02■□□□□ 0.95
TRAM1-201ENST00000262213 SSH2Q76I76 1423 aa21.02■□□□□ 0.95
TRAM1-201ENST00000262213 ARHGEF10O15013 1369 aa21.01■□□□□ 0.95
TRAM1-201ENST00000262213 SYT1P21579 422 aa21.01■□□□□ 0.95
TRAM1-201ENST00000262213 USP6P35125 1406 aa21.01■□□□□ 0.95
TRAM1-201ENST00000262213 SMC3Q9UQE7 1217 aa21.01■□□□□ 0.95
TRAM1-201ENST00000262213 SOS1Q07889 1333 aaPredicted RBP21.01■□□□□ 0.95
TRAM1-201ENST00000262213 STX6O43752 255 aa21.01■□□□□ 0.95
TRAM1-201ENST00000262213 GIMAP6Q6P9H5 292 aa21.01■□□□□ 0.95
TRAM1-201ENST00000262213 SRGAP3O43295 1099 aa21■□□□□ 0.95
TRAM1-201ENST00000262213 RUFY3Q7L099 469 aa21■□□□□ 0.95
TRAM1-201ENST00000262213 RHPN1Q8TCX5 695 aa21■□□□□ 0.95
TRAM1-201ENST00000262213 GNAT3A8MTJ3 354 aa21■□□□□ 0.95
TRAM1-201ENST00000262213 LARGE1O95461 756 aa21■□□□□ 0.95
TRAM1-201ENST00000262213 TUBGCP6Q96RT7 1819 aa21■□□□□ 0.95
TRAM1-201ENST00000262213 CASTP20810 708 aaKnown RBP20.99■□□□□ 0.95
TRAM1-201ENST00000262213 HDGFL1Q5TGJ6 251 aa20.99■□□□□ 0.95
TRAM1-201ENST00000262213 CCDC83Q8IWF9 413 aa20.99■□□□□ 0.95
TRAM1-201ENST00000262213 NGDNQ8NEJ9 315 aaKnown RBP20.99■□□□□ 0.95
TRAM1-201ENST00000262213 CEP170BQ9Y4F5 1589 aaPredicted RBP20.99■□□□□ 0.95
TRAM1-201ENST00000262213 SGSM2O43147 1006 aa20.99■□□□□ 0.95
TRAM1-201ENST00000262213 NOLC1Q14978 699 aaKnown RBP eCLIP20.99■□□□□ 0.95
TRAM1-201ENST00000262213 SLC26A8Q96RN1 970 aa20.99■□□□□ 0.95
TRAM1-201ENST00000262213 PRDM10Q9NQV6 1147 aa20.99■□□□□ 0.95
TRAM1-201ENST00000262213 CHMP3Q9Y3E7 222 aa20.99■□□□□ 0.95
TRAM1-201ENST00000262213 RAD50Q92878 1312 aa20.99■□□□□ 0.95
TRAM1-201ENST00000262213 PI4K2BQ8TCG2 481 aa20.98■□□□□ 0.95
TRAM1-201ENST00000262213 PLEKHG3A1L390 1219 aa20.98■□□□□ 0.95
TRAM1-201ENST00000262213 OS9Q13438 667 aaPredicted RBP20.98■□□□□ 0.95
TRAM1-201ENST00000262213 USHBP1Q8N6Y0 703 aa20.98■□□□□ 0.95
TRAM1-201ENST00000262213 FAM184AQ8NB25 1140 aa20.98■□□□□ 0.95
TRAM1-201ENST00000262213 IL17REQ8NFR9 667 aa20.98■□□□□ 0.95
TRAM1-201ENST00000262213 LIMCH1Q9UPQ0 1083 aa20.98■□□□□ 0.95
TRAM1-201ENST00000262213 HDGFP51858 240 aaKnown RBP20.97■□□□□ 0.95
TRAM1-201ENST00000262213 SSH3Q8TE77 659 aa20.97■□□□□ 0.95
TRAM1-201ENST00000262213 FLT4P35916 1363 aa20.97■□□□□ 0.95
TRAM1-201ENST00000262213 F13A1P00488 732 aa20.97■□□□□ 0.95
TRAM1-201ENST00000262213 LSG1Q9H089 658 aaKnown RBP20.97■□□□□ 0.95
TRAM1-201ENST00000262213 RGPD1P0DJD0 1748 aa20.97■□□□□ 0.95
TRAM1-201ENST00000262213 NBPF7P0C2Y1 421 aaPredicted RBP20.97■□□□□ 0.95
TRAM1-201ENST00000262213 DNM1Q05193 864 aaKnown RBP20.97■□□□□ 0.95
TRAM1-201ENST00000262213 CNTROBQ8N137 903 aa20.97■□□□□ 0.95
TRAM1-201ENST00000262213 VPS37CA5D8V6 355 aaPredicted RBP20.96■□□□□ 0.95
TRAM1-201ENST00000262213 ANXA1P04083 346 aa20.96■□□□□ 0.95
TRAM1-201ENST00000262213 UBE2HP62256 183 aa20.96■□□□□ 0.95
TRAM1-201ENST00000262213 UVSSAQ2YD98 709 aa20.96■□□□□ 0.95
TRAM1-201ENST00000262213 SIRT1Q96EB6 747 aa20.96■□□□□ 0.95
TRAM1-201ENST00000262213 TTC14Q96N46 770 aa20.96■□□□□ 0.95
TRAM1-201ENST00000262213 SPC24Q8NBT2 197 aa20.96■□□□□ 0.95
TRAM1-201ENST00000262213 PIBF1Q8WXW3 757 aa20.96■□□□□ 0.95
TRAM1-201ENST00000262213 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.96■□□□□ 0.95
TRAM1-201ENST00000262213 TRHP20396 242 aaPredicted RBP20.95■□□□□ 0.94
TRAM1-201ENST00000262213 PLPPR3Q6T4P5 718 aa20.95■□□□□ 0.94
TRAM1-201ENST00000262213 USP31Q70CQ4 1352 aa20.95■□□□□ 0.94
TRAM1-201ENST00000262213 GJB2P29033 226 aa20.95■□□□□ 0.94
TRAM1-201ENST00000262213 SBNO1A3KN83 1393 aa20.94■□□□□ 0.94
TRAM1-201ENST00000262213 IGSF1Q8N6C5 1336 aa20.94■□□□□ 0.94
TRAM1-201ENST00000262213 PLEKHG5O94827 1062 aa20.94■□□□□ 0.94
TRAM1-201ENST00000262213 NLRP6P59044 892 aa20.94■□□□□ 0.94
TRAM1-201ENST00000262213 MYRIPQ8NFW9 859 aa20.94■□□□□ 0.94
TRAM1-201ENST00000262213 JAKMIP1Q96N16 626 aaKnown RBP20.94■□□□□ 0.94
TRAM1-201ENST00000262213 AOX1Q06278 1338 aa20.94■□□□□ 0.94
TRAM1-201ENST00000262213 TAF7Q15545 349 aaPredicted RBP20.94■□□□□ 0.94
TRAM1-201ENST00000262213 PRPF40BQ6NWY9 871 aaKnown RBP20.94■□□□□ 0.94
TRAM1-201ENST00000262213 TMEM87AQ8NBN3 555 aa20.94■□□□□ 0.94
TRAM1-201ENST00000262213 DIAPH3Q9NSV4 1193 aa20.94■□□□□ 0.94
TRAM1-201ENST00000262213 TECPR2O15040 1411 aa20.94■□□□□ 0.94
TRAM1-201ENST00000262213 XRN1Q8IZH2 1706 aaKnown RBP20.94■□□□□ 0.94
TRAM1-201ENST00000262213 ADCK5Q3MIX3 580 aa20.93■□□□□ 0.94
TRAM1-201ENST00000262213 KIF1BPQ96EK5 621 aa20.93■□□□□ 0.94
TRAM1-201ENST00000262213 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.93■□□□□ 0.94
TRAM1-201ENST00000262213 RAB11FIP3O75154 756 aa20.93■□□□□ 0.94
TRAM1-201ENST00000262213 KDM4AO75164 1064 aa20.93■□□□□ 0.94
TRAM1-201ENST00000262213 PTH1RQ03431 593 aa20.93■□□□□ 0.94
TRAM1-201ENST00000262213 NECAB1Q8N987 351 aa20.93■□□□□ 0.94
TRAM1-201ENST00000262213 IL17RAQ96F46 866 aa20.92■□□□□ 0.94
TRAM1-201ENST00000262213 AP5Z1O43299 807 aa20.91■□□□□ 0.94
TRAM1-201ENST00000262213 C14orf37Q86TY3 774 aa20.91■□□□□ 0.94
TRAM1-201ENST00000262213 PDRG1Q9NUG6 133 aa20.91■□□□□ 0.94
TRAM1-201ENST00000262213 KDRP35968 1356 aa20.91■□□□□ 0.94
TRAM1-201ENST00000262213 FAM208AQ9UK61 1670 aaKnown RBP20.91■□□□□ 0.94
TRAM1-201ENST00000262213 FERMT3Q86UX7 667 aa20.91■□□□□ 0.94
TRAM1-201ENST00000262213 DNAJC5Q9H3Z4 198 aa20.91■□□□□ 0.94
TRAM1-201ENST00000262213 LETM1O95202 739 aaPredicted RBP20.91■□□□□ 0.94
TRAM1-201ENST00000262213 POLA2Q14181 598 aa20.91■□□□□ 0.94
TRAM1-201ENST00000262213 MTERF4Q7Z6M4 381 aaKnown RBP20.91■□□□□ 0.94
TRAM1-201ENST00000262213 ATP6V1DQ9Y5K8 247 aa20.91■□□□□ 0.94
TRAM1-201ENST00000262213 PI4KAP2A4QPH2 592 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms