RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 TNNQ9UQP3 1299 aa35.21■■■■□ 3.23
SMARCD3-201ENST00000262188 TJP1Q07157 1748 aa35.2■■■■□ 3.23
SMARCD3-201ENST00000262188 IRX6P78412 446 aaPredicted RBP35.2■■■■□ 3.23
SMARCD3-201ENST00000262188 ZNF428Q96B54 188 aa35.2■■■■□ 3.23
SMARCD3-201ENST00000262188 SOS1Q07889 1333 aaPredicted RBP35.19■■■■□ 3.22
SMARCD3-201ENST00000262188 A1BGP04217 495 aa35.19■■■■□ 3.22
SMARCD3-201ENST00000262188 RRP1P56182 461 aaKnown RBP35.19■■■■□ 3.22
SMARCD3-201ENST00000262188 LAMB4A4D0S4 1761 aa35.19■■■■□ 3.22
SMARCD3-201ENST00000262188 VSIG10Q8N0Z9 540 aa35.18■■■■□ 3.22
SMARCD3-201ENST00000262188 NOB1Q9ULX3 412 aaKnown RBP35.18■■■■□ 3.22
SMARCD3-201ENST00000262188 STK31Q9BXU1 1019 aa35.18■■■■□ 3.22
SMARCD3-201ENST00000262188 MYL6BP14649 208 aa35.16■■■■□ 3.22
SMARCD3-201ENST00000262188 PDIA6Q15084 440 aa35.16■■■■□ 3.22
SMARCD3-201ENST00000262188 APBA3O96018 575 aa35.16■■■■□ 3.22
SMARCD3-201ENST00000262188 PHAXQ9H814 394 aaKnown RBP35.16■■■■□ 3.22
SMARCD3-201ENST00000262188 ERICH6BQ5W0A0 696 aa35.15■■■■□ 3.22
SMARCD3-201ENST00000262188 RNF123Q5XPI4 1314 aa35.15■■■■□ 3.22
SMARCD3-201ENST00000262188 NBPF26B4DH59 902 aa35.14■■■■□ 3.22
SMARCD3-201ENST00000262188 CYP19A1P11511 503 aaPredicted RBP35.14■■■■□ 3.22
SMARCD3-201ENST00000262188 NBPF14Q5TI25 921 aa35.14■■■■□ 3.22
SMARCD3-201ENST00000262188 NBPF10Q6P3W6 841 aaKnown RBP35.14■■■■□ 3.22
SMARCD3-201ENST00000262188 NBPF15Q8N660 670 aa35.14■■■■□ 3.22
SMARCD3-201ENST00000262188 TNS1Q9HBL0 1735 aaKnown RBP35.13■■■■□ 3.21
SMARCD3-201ENST00000262188 C20orf194Q5TEA3 1177 aa35.13■■■■□ 3.21
SMARCD3-201ENST00000262188 CCNL1Q9UK58 526 aaPredicted RBP35.13■■■■□ 3.21
SMARCD3-201ENST00000262188 LY75O60449 1722 aa35.13■■■■□ 3.21
SMARCD3-201ENST00000262188 CANXP27824 592 aaKnown RBP35.13■■■■□ 3.21
SMARCD3-201ENST00000262188 LINC00116Q8NCU8 138 aa35.12■■■■□ 3.21
SMARCD3-201ENST00000262188 LRRC4BQ9NT99 713 aa35.11■■■■□ 3.21
SMARCD3-201ENST00000262188 DBF4Q9UBU7 674 aaPredicted RBP35.11■■■■□ 3.21
SMARCD3-201ENST00000262188 STARD3NLO95772 234 aa35.09■■■■□ 3.21
SMARCD3-201ENST00000262188 CLUAP1Q96AJ1 413 aa35.09■■■■□ 3.21
SMARCD3-201ENST00000262188 TEX13AQ9BXU3 409 aaPredicted RBP35.09■■■■□ 3.21
SMARCD3-201ENST00000262188 DDX21Q9NR30 783 aaKnown RBP eCLIP35.09■■■■□ 3.21
SMARCD3-201ENST00000262188 RBM19Q9Y4C8 960 aaKnown RBP35.09■■■■□ 3.21
SMARCD3-201ENST00000262188 PROM2Q8N271 834 aa35.08■■■■□ 3.21
SMARCD3-201ENST00000262188 ZBTB1Q9Y2K1 713 aa35.08■■■■□ 3.21
SMARCD3-201ENST00000262188 BRPF1P55201 1214 aaPredicted RBP35.07■■■■□ 3.21
SMARCD3-201ENST00000262188 ZNF330Q9Y3S2 320 aaPredicted RBP35.07■■■■□ 3.21
SMARCD3-201ENST00000262188 AIMP1Q12904 312 aaKnown RBP35.07■■■■□ 3.2
SMARCD3-201ENST00000262188 FLIIQ13045 1269 aa35.07■■■■□ 3.2
SMARCD3-201ENST00000262188 LRP10Q7Z4F1 713 aa35.07■■■■□ 3.2
SMARCD3-201ENST00000262188 KIF16BQ96L93 1317 aa35.07■■■■□ 3.2
SMARCD3-201ENST00000262188 TRIM27P14373 513 aa35.06■■■■□ 3.2
SMARCD3-201ENST00000262188 CRKLP46109 303 aaKnown RBP35.06■■■■□ 3.2
SMARCD3-201ENST00000262188 ZKSCAN2Q63HK3 967 aa35.05■■■■□ 3.2
SMARCD3-201ENST00000262188 INTS5Q6P9B9 1019 aaKnown RBP35.05■■■■□ 3.2
SMARCD3-201ENST00000262188 COL5A3P25940 1745 aaPredicted RBP35.04■■■■□ 3.2
SMARCD3-201ENST00000262188 SMIM5Q71RC9 77 aa35.04■■■■□ 3.2
SMARCD3-201ENST00000262188 PANK1Q8TE04 598 aa35.04■■■■□ 3.2
SMARCD3-201ENST00000262188 MYH14Q7Z406 1995 aaKnown RBP35.04■■■■□ 3.2
SMARCD3-201ENST00000262188 RLBP1P12271 317 aa35.04■■■■□ 3.2
SMARCD3-201ENST00000262188 TXNRD1Q16881 649 aa35.04■■■■□ 3.2
SMARCD3-201ENST00000262188 F6X3S4 739 aa35.03■■■■□ 3.2
SMARCD3-201ENST00000262188 CICQ96RK0 1608 aaPredicted RBP35.03■■■■□ 3.2
SMARCD3-201ENST00000262188 FKBP5Q13451 457 aaPredicted RBP35.02■■■■□ 3.2
SMARCD3-201ENST00000262188 ATF7IPQ6VMQ6 1270 aa35.02■■■■□ 3.2
SMARCD3-201ENST00000262188 XAGE3Q8WTP9 111 aa35.02■■■■□ 3.2
SMARCD3-201ENST00000262188 ZNF831Q5JPB2 1677 aa35.02■■■■□ 3.2
SMARCD3-201ENST00000262188 GOLGA6L2Q8N9W4 650 aaPredicted RBP35.02■■■■□ 3.2
SMARCD3-201ENST00000262188 HYPKQ9NX55 129 aa35.02■■■■□ 3.2
SMARCD3-201ENST00000262188 EN1Q05925 392 aaPredicted RBP35.01■■■■□ 3.19
SMARCD3-201ENST00000262188 COPS6Q7L5N1 327 aa35.01■■■■□ 3.19
SMARCD3-201ENST00000262188 CHMP4AQ9BY43 222 aa35.01■■■■□ 3.19
SMARCD3-201ENST00000262188 CCDC87Q9NVE4 849 aa35.01■■■■□ 3.19
SMARCD3-201ENST00000262188 PLSCR1O15162 318 aa35■■■■□ 3.19
SMARCD3-201ENST00000262188 TAF1LQ8IZX4 1826 aa35■■■■□ 3.19
SMARCD3-201ENST00000262188 CACNA1FO60840 1977 aa35■■■■□ 3.19
SMARCD3-201ENST00000262188 TTLL7Q6ZT98 887 aa34.98■■■■□ 3.19
SMARCD3-201ENST00000262188 DEFB132Q7Z7B7 95 aa34.98■■■■□ 3.19
SMARCD3-201ENST00000262188 ERBB4Q15303 1308 aa34.98■■■■□ 3.19
SMARCD3-201ENST00000262188 IPO8O15397 1037 aaKnown RBP34.98■■■■□ 3.19
SMARCD3-201ENST00000262188 EZH2Q15910 746 aaKnown RBP34.96■■■■□ 3.19
SMARCD3-201ENST00000262188 AMIGO3Q86WK7 504 aa34.96■■■■□ 3.19
SMARCD3-201ENST00000262188 ARXQ96QS3 562 aa34.95■■■■□ 3.19
SMARCD3-201ENST00000262188 PTPRCP08575 1304 aa34.95■■■■□ 3.19
SMARCD3-201ENST00000262188 SLC27A3Q5K4L6 730 aa34.94■■■■□ 3.18
SMARCD3-201ENST00000262188 PI4KAP2A4QPH2 592 aa34.94■■■■□ 3.18
SMARCD3-201ENST00000262188 DZIP1LQ8IYY4 767 aaKnown RBP34.94■■■■□ 3.18
SMARCD3-201ENST00000262188 PI4KAP1Q8N8J0 262 aa34.94■■■■□ 3.18
SMARCD3-201ENST00000262188 ARHGAP45Q92619 1136 aa34.94■■■■□ 3.18
SMARCD3-201ENST00000262188 FTSJ3Q8IY81 847 aaKnown RBP34.93■■■■□ 3.18
SMARCD3-201ENST00000262188 ADCY9O60503 1353 aa34.93■■■■□ 3.18
SMARCD3-201ENST00000262188 C4BP0C0L5 1744 aa34.93■■■■□ 3.18
SMARCD3-201ENST00000262188 SF3B2Q13435 895 aaKnown RBP34.93■■■■□ 3.18
SMARCD3-201ENST00000262188 FKBP8Q14318 412 aa34.93■■■■□ 3.18
SMARCD3-201ENST00000262188 SLC4A10Q6U841 1118 aa34.93■■■■□ 3.18
SMARCD3-201ENST00000262188 COG6Q9Y2V7 657 aa34.93■■■■□ 3.18
SMARCD3-201ENST00000262188 RREB1Q92766 1687 aa34.92■■■■□ 3.18
SMARCD3-201ENST00000262188 TMEM57Q8N5G2 664 aa34.92■■■■□ 3.18
SMARCD3-201ENST00000262188 CAMKK2Q96RR4 588 aa34.92■■■■□ 3.18
SMARCD3-201ENST00000262188 CRBNQ96SW2 442 aa34.92■■■■□ 3.18
SMARCD3-201ENST00000262188 API5Q9BZZ5 524 aaKnown RBP34.92■■■■□ 3.18
SMARCD3-201ENST00000262188 CNTNAP4Q9C0A0 1308 aa34.92■■■■□ 3.18
SMARCD3-201ENST00000262188 GNPATO15228 680 aa34.91■■■■□ 3.18
SMARCD3-201ENST00000262188 ILDR2Q71H61 639 aa34.91■■■■□ 3.18
SMARCD3-201ENST00000262188 MAP3K2Q9Y2U5 619 aa34.9■■■■□ 3.18
SMARCD3-201ENST00000262188 IL6STP40189 918 aaPredicted RBP34.89■■■■□ 3.18
SMARCD3-201ENST00000262188 EIF5P55010 431 aaKnown RBP34.89■■■■□ 3.18
SMARCD3-201ENST00000262188 ZBTB3Q9H5J0 574 aa34.89■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms