RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 ABHD8Q96I13 439 aa18.01■□□□□ 0.47
SGCA-201ENST00000262018 ZNF831Q5JPB2 1677 aa18.01■□□□□ 0.47
SGCA-201ENST00000262018 MYH14Q7Z406 1995 aaKnown RBP18■□□□□ 0.47
SGCA-201ENST00000262018 ERVV-2B6SEH9 535 aa18■□□□□ 0.47
SGCA-201ENST00000262018 LBX1P52954 281 aa18■□□□□ 0.47
SGCA-201ENST00000262018 TIAM2Q8IVF5 1701 aa17.99■□□□□ 0.47
SGCA-201ENST00000262018 PTCD1O75127 700 aaKnown RBP17.99■□□□□ 0.47
SGCA-201ENST00000262018 TM4SF1P30408 202 aa17.99■□□□□ 0.47
SGCA-201ENST00000262018 CCER2I3L3R5 266 aa17.98■□□□□ 0.47
SGCA-201ENST00000262018 NFKBIEO00221 500 aa17.98■□□□□ 0.47
SGCA-201ENST00000262018 TTLL6Q8N841 843 aa17.98■□□□□ 0.47
SGCA-201ENST00000262018 POTEIP0CG38 1075 aa17.98■□□□□ 0.47
SGCA-201ENST00000262018 POTEJP0CG39 1038 aa17.98■□□□□ 0.47
SGCA-201ENST00000262018 VEGFBP49765 207 aa17.97■□□□□ 0.47
SGCA-201ENST00000262018 CCDC88AQ3V6T2 1871 aa17.96■□□□□ 0.47
SGCA-201ENST00000262018 ZPR1O75312 459 aa17.96■□□□□ 0.47
SGCA-201ENST00000262018 CABP4P57796 275 aa17.96■□□□□ 0.47
SGCA-201ENST00000262018 MLLT1Q03111 559 aaPredicted RBP17.96■□□□□ 0.47
SGCA-201ENST00000262018 USPL1Q5W0Q7 1092 aa17.96■□□□□ 0.47
SGCA-201ENST00000262018 WBP1LQ9NX94 342 aa17.96■□□□□ 0.47
SGCA-201ENST00000262018 KIF20BQ96Q89 1820 aa17.95■□□□□ 0.46
SGCA-201ENST00000262018 HSP90AB1P08238 724 aaKnown RBP17.95■□□□□ 0.46
SGCA-201ENST00000262018 ERFEQ4G0M1 354 aa17.95■□□□□ 0.46
SGCA-201ENST00000262018 C2CD5Q86YS7 1000 aa17.95■□□□□ 0.46
SGCA-201ENST00000262018 POLR3GLQ9BT43 218 aa17.95■□□□□ 0.46
SGCA-201ENST00000262018 CCDC85CA6NKD9 419 aa17.92■□□□□ 0.46
SGCA-201ENST00000262018 H0YIN7 160 aa17.92■□□□□ 0.46
SGCA-201ENST00000262018 CENPBP07199 599 aaPredicted RBP17.92■□□□□ 0.46
SGCA-201ENST00000262018 HSPA8P11142 646 aaKnown RBP17.92■□□□□ 0.46
SGCA-201ENST00000262018 NFIXQ14938 502 aa17.92■□□□□ 0.46
SGCA-201ENST00000262018 INTS5Q6P9B9 1019 aaKnown RBP17.92■□□□□ 0.46
SGCA-201ENST00000262018 ZNF219Q9P2Y4 722 aaPredicted RBP17.92■□□□□ 0.46
SGCA-201ENST00000262018 PASKQ96RG2 1323 aa17.92■□□□□ 0.46
SGCA-201ENST00000262018 TMEM88BA6NKF7 163 aa17.91■□□□□ 0.46
SGCA-201ENST00000262018 DDNO94850 711 aaPredicted RBP17.91■□□□□ 0.46
SGCA-201ENST00000262018 SERPINB2P05120 415 aa17.91■□□□□ 0.46
SGCA-201ENST00000262018 ZNF530Q6P9A1 599 aaPredicted RBP17.89■□□□□ 0.46
SGCA-201ENST00000262018 PRKRIP1Q9H875 184 aaPredicted RBP17.89■□□□□ 0.46
SGCA-201ENST00000262018 DLEC1Q9Y238 1755 aa17.89■□□□□ 0.45
SGCA-201ENST00000262018 AFDNP55196 1824 aaKnown RBP17.89■□□□□ 0.45
SGCA-201ENST00000262018 C21orf2O43822 256 aa17.89■□□□□ 0.45
SGCA-201ENST00000262018 EIF4A2Q14240 407 aaKnown RBP17.89■□□□□ 0.45
SGCA-201ENST00000262018 PLEKHO1Q53GL0 409 aaPredicted RBP17.89■□□□□ 0.45
SGCA-201ENST00000262018 LDHDQ86WU2 507 aa17.89■□□□□ 0.45
SGCA-201ENST00000262018 ZNF622Q969S3 477 aaKnown RBP eCLIP17.89■□□□□ 0.45
SGCA-201ENST00000262018 ADAMTS7Q9UKP4 1686 aa17.88■□□□□ 0.45
SGCA-201ENST00000262018 MTHFSP49914 203 aa17.88■□□□□ 0.45
SGCA-201ENST00000262018 NFATC2IPQ8NCF5 419 aa17.88■□□□□ 0.45
SGCA-201ENST00000262018 CARD14Q9BXL6 1004 aa17.88■□□□□ 0.45
SGCA-201ENST00000262018 SOS1Q07889 1333 aaPredicted RBP17.87■□□□□ 0.45
SGCA-201ENST00000262018 CARMIL3Q8ND23 1372 aa17.87■□□□□ 0.45
SGCA-201ENST00000262018 TJP1Q07157 1748 aa17.87■□□□□ 0.45
SGCA-201ENST00000262018 RGS19P49795 217 aa17.87■□□□□ 0.45
SGCA-201ENST00000262018 DNAJC10Q8IXB1 793 aa17.87■□□□□ 0.45
SGCA-201ENST00000262018 NARFQ9UHQ1 456 aa17.87■□□□□ 0.45
SGCA-201ENST00000262018 ANKRD26Q9UPS8 1709 aa17.86■□□□□ 0.45
SGCA-201ENST00000262018 IQCA1LA6NCM1 817 aa17.86■□□□□ 0.45
SGCA-201ENST00000262018 POLKQ9UBT6 870 aa17.86■□□□□ 0.45
SGCA-201ENST00000262018 VIRMAQ69YN4 1812 aaKnown RBP17.86■□□□□ 0.45
SGCA-201ENST00000262018 NRXN2Q9P2S2 1712 aa17.86■□□□□ 0.45
SGCA-201ENST00000262018 ITGBL1O95965 494 aaPredicted RBP17.85■□□□□ 0.45
SGCA-201ENST00000262018 MAP2K1Q02750 393 aaPredicted RBP17.85■□□□□ 0.45
SGCA-201ENST00000262018 DEFB115Q30KQ5 88 aa17.85■□□□□ 0.45
SGCA-201ENST00000262018 YTHDC1Q96MU7 727 aaKnown RBP17.85■□□□□ 0.45
SGCA-201ENST00000262018 TAF1DQ9H5J8 278 aaPredicted RBP17.85■□□□□ 0.45
SGCA-201ENST00000262018 DICER1Q9UPY3 1922 aaKnown RBP17.84■□□□□ 0.45
SGCA-201ENST00000262018 EAPPQ56P03 285 aaPredicted RBP17.84■□□□□ 0.45
SGCA-201ENST00000262018 BICDL1Q6ZP65 573 aa17.84■□□□□ 0.45
SGCA-201ENST00000262018 TAOK3Q9H2K8 898 aa17.84■□□□□ 0.45
SGCA-201ENST00000262018 BCL2L12Q9HB09 334 aa17.84■□□□□ 0.45
SGCA-201ENST00000262018 AMOTQ4VCS5 1084 aa17.83■□□□□ 0.45
SGCA-201ENST00000262018 C1orf141Q5JVX7 400 aa17.83■□□□□ 0.45
SGCA-201ENST00000262018 CLEC11AQ9Y240 323 aa17.83■□□□□ 0.45
SGCA-201ENST00000262018 WDR33Q9C0J8 1336 aaKnown RBP17.83■□□□□ 0.44
SGCA-201ENST00000262018 COL15A1P39059 1388 aa17.83■□□□□ 0.44
SGCA-201ENST00000262018 RASSF10A6NK89 507 aa17.82■□□□□ 0.44
SGCA-201ENST00000262018 CFAP44Q96MT7 982 aa17.82■□□□□ 0.44
SGCA-201ENST00000262018 LTBP3Q9NS15 1303 aa17.82■□□□□ 0.44
SGCA-201ENST00000262018 PER1O15534 1290 aaPredicted RBP17.81■□□□□ 0.44
SGCA-201ENST00000262018 FER1L6Q2WGJ9 1857 aa17.81■□□□□ 0.44
SGCA-201ENST00000262018 CYP19A1P11511 503 aaPredicted RBP17.81■□□□□ 0.44
SGCA-201ENST00000262018 TNNT2P45379 298 aaPredicted RBP17.81■□□□□ 0.44
SGCA-201ENST00000262018 L3MBTL3Q96JM7 780 aaPredicted RBP17.81■□□□□ 0.44
SGCA-201ENST00000262018 ABT1Q9ULW3 272 aaKnown RBP17.81■□□□□ 0.44
SGCA-201ENST00000262018 PDE6BP35913 854 aa17.8■□□□□ 0.44
SGCA-201ENST00000262018 CCDC24Q8N4L8 307 aa17.8■□□□□ 0.44
SGCA-201ENST00000262018 PANK3Q9H999 370 aa17.8■□□□□ 0.44
SGCA-201ENST00000262018 PDZRN3Q9UPQ7 1066 aa17.8■□□□□ 0.44
SGCA-201ENST00000262018 ZBTB1Q9Y2K1 713 aa17.8■□□□□ 0.44
SGCA-201ENST00000262018 BEGAINQ9BUH8 593 aa17.79■□□□□ 0.44
SGCA-201ENST00000262018 BRIP1Q9BX63 1249 aa17.79■□□□□ 0.44
SGCA-201ENST00000262018 SCN4AP35499 1836 aa17.77■□□□□ 0.44
SGCA-201ENST00000262018 MAP1SQ66K74 1059 aaPredicted RBP17.77■□□□□ 0.44
SGCA-201ENST00000262018 CNTROBQ8N137 903 aa17.77■□□□□ 0.44
SGCA-201ENST00000262018 HACL1Q9UJ83 578 aa17.77■□□□□ 0.44
SGCA-201ENST00000262018 CANXP27824 592 aaKnown RBP17.76■□□□□ 0.43
SGCA-201ENST00000262018 EPHX2P34913 555 aa17.76■□□□□ 0.43
SGCA-201ENST00000262018 RALBP1Q15311 655 aa17.76■□□□□ 0.43
SGCA-201ENST00000262018 PAXIP1Q6ZW49 1069 aaPredicted RBP17.76■□□□□ 0.43
SGCA-201ENST00000262018 ANKRD31Q8N7Z5 1873 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms