RNA–Protein interactions for RNA: ENST00000261890.6

RAB11A-201, Transcript of RAB11A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-201ENST00000261890 BLOC1S2Q6QNY1 142 aa9.25□□□□□ -0.93
RAB11A-201ENST00000261890 PI4KAP1Q8N8J0 262 aa9.25□□□□□ -0.93
RAB11A-201ENST00000261890 HOXB7P09629 217 aa9.25□□□□□ -0.93
RAB11A-201ENST00000261890 CCDC85AQ96PX6 553 aaPredicted RBP9.25□□□□□ -0.93
RAB11A-201ENST00000261890 GZF1Q9H116 711 aaPredicted RBP9.25□□□□□ -0.93
RAB11A-201ENST00000261890 IL1RAPL2Q9NP60 686 aa9.25□□□□□ -0.93
RAB11A-201ENST00000261890 ARHGAP31Q2M1Z3 1444 aa9.25□□□□□ -0.93
RAB11A-201ENST00000261890 ATP2B2Q01814 1243 aa9.24□□□□□ -0.93
RAB11A-201ENST00000261890 MTHFSDQ2M296 383 aaKnown RBP9.24□□□□□ -0.93
RAB11A-201ENST00000261890 ZGPATQ8N5A5 531 aaKnown RBP9.24□□□□□ -0.93
RAB11A-201ENST00000261890 TSHZ2Q9NRE2 1034 aa9.24□□□□□ -0.93
RAB11A-201ENST00000261890 ERVK-7P63135 1459 aa9.24□□□□□ -0.93
RAB11A-201ENST00000261890 PES1O00541 588 aaKnown RBP9.24□□□□□ -0.93
RAB11A-201ENST00000261890 KDM6BO15054 1643 aa9.24□□□□□ -0.93
RAB11A-201ENST00000261890 USP5P45974 858 aa9.24□□□□□ -0.93
RAB11A-201ENST00000261890 GSTO1P78417 241 aa9.24□□□□□ -0.93
RAB11A-201ENST00000261890 RNF41Q9H4P4 317 aaPredicted RBP9.24□□□□□ -0.93
RAB11A-201ENST00000261890 LRRFIP2Q9Y608 721 aaKnown RBP9.24□□□□□ -0.93
RAB11A-201ENST00000261890 RNMTO43148 476 aaKnown RBP9.24□□□□□ -0.93
RAB11A-201ENST00000261890 BAG3O95817 575 aa9.24□□□□□ -0.93
RAB11A-201ENST00000261890 ANKRD18AQ8IVF6 992 aa9.24□□□□□ -0.93
RAB11A-201ENST00000261890 ACSBG1Q96GR2 724 aa9.24□□□□□ -0.93
RAB11A-201ENST00000261890 UTP14AQ9BVJ6 771 aaKnown RBP9.24□□□□□ -0.93
RAB11A-201ENST00000261890 STK32BQ9NY57 414 aa9.24□□□□□ -0.93
RAB11A-201ENST00000261890 R3HCC1Q9Y3T6 440 aaKnown RBP9.24□□□□□ -0.93
RAB11A-201ENST00000261890 TMEM94Q12767 1356 aa9.23□□□□□ -0.93
RAB11A-201ENST00000261890 CRACR2BQ8N4Y2 399 aaPredicted RBP9.23□□□□□ -0.93
RAB11A-201ENST00000261890 EXOC6BQ9Y2D4 811 aa9.23□□□□□ -0.93
RAB11A-201ENST00000261890 PARP3Q9Y6F1 533 aa9.23□□□□□ -0.93
RAB11A-201ENST00000261890 HMGB1P09429 215 aaKnown RBP9.23□□□□□ -0.93
RAB11A-201ENST00000261890 UBE3BQ7Z3V4 1068 aa9.23□□□□□ -0.93
RAB11A-201ENST00000261890 XAGE3Q8WTP9 111 aa9.23□□□□□ -0.93
RAB11A-201ENST00000261890 FAM83GA6ND36 823 aa9.23□□□□□ -0.93
RAB11A-201ENST00000261890 POLR3DP05423 398 aaPredicted RBP9.23□□□□□ -0.93
RAB11A-201ENST00000261890 LINS1Q8NG48 757 aa9.23□□□□□ -0.93
RAB11A-201ENST00000261890 CARD14Q9BXL6 1004 aa9.23□□□□□ -0.93
RAB11A-201ENST00000261890 TFCP2L1Q9NZI6 479 aa9.23□□□□□ -0.93
RAB11A-201ENST00000261890 ZRANB1Q9UGI0 708 aa9.23□□□□□ -0.93
RAB11A-201ENST00000261890 NOL7Q9UMY1 257 aaKnown RBP9.23□□□□□ -0.93
RAB11A-201ENST00000261890 MYOM2P54296 1465 aa9.23□□□□□ -0.93
RAB11A-201ENST00000261890 F6X3S4 739 aa9.23□□□□□ -0.93
RAB11A-201ENST00000261890 PPP4R3BQ5MIZ7 849 aa9.23□□□□□ -0.93
RAB11A-201ENST00000261890 COPS6Q7L5N1 327 aa9.23□□□□□ -0.93
RAB11A-201ENST00000261890 DZIP3Q86Y13 1208 aaKnown RBP9.23□□□□□ -0.93
RAB11A-201ENST00000261890 NFATC2IPQ8NCF5 419 aa9.23□□□□□ -0.93
RAB11A-201ENST00000261890 ZNF622Q969S3 477 aaKnown RBP eCLIP9.23□□□□□ -0.93
RAB11A-201ENST00000261890 USP21Q9UK80 565 aa9.23□□□□□ -0.93
RAB11A-201ENST00000261890 CCDC196A0A1B0GTZ2 297 aa9.22□□□□□ -0.93
RAB11A-201ENST00000261890 WWC2Q6AWC2 1192 aa9.22□□□□□ -0.93
RAB11A-201ENST00000261890 MTMR7Q9Y216 660 aa9.22□□□□□ -0.93
RAB11A-201ENST00000261890 IPO7O95373 1038 aaKnown RBP9.22□□□□□ -0.93
RAB11A-201ENST00000261890 TRIM27P14373 513 aa9.22□□□□□ -0.93
RAB11A-201ENST00000261890 CDK5RAP3Q96JB5 506 aa9.22□□□□□ -0.93
RAB11A-201ENST00000261890 MYO1BO43795 1136 aa9.22□□□□□ -0.93
RAB11A-201ENST00000261890 PARP10Q53GL7 1025 aa9.22□□□□□ -0.93
RAB11A-201ENST00000261890 SASS6Q6UVJ0 657 aa9.22□□□□□ -0.93
RAB11A-201ENST00000261890 ECHDC1Q9NTX5 307 aa9.22□□□□□ -0.93
RAB11A-201ENST00000261890 TRAPPC3LQ5T215 181 aa9.22□□□□□ -0.93
RAB11A-201ENST00000261890 EVI5LQ96CN4 794 aa9.22□□□□□ -0.93
RAB11A-201ENST00000261890 NAPBQ9H115 298 aa9.22□□□□□ -0.93
RAB11A-201ENST00000261890 CHPF2Q9P2E5 772 aa9.22□□□□□ -0.93
RAB11A-201ENST00000261890 NIP7Q9Y221 180 aaKnown RBP eCLIP9.22□□□□□ -0.93
RAB11A-201ENST00000261890 CLASP1Q7Z460 1538 aa9.22□□□□□ -0.93
RAB11A-201ENST00000261890 TSPOAP1O95153 1857 aa9.22□□□□□ -0.93
RAB11A-201ENST00000261890 NAT10Q9H0A0 1025 aaKnown RBP9.21□□□□□ -0.93
RAB11A-201ENST00000261890 MKNK2Q9HBH9 465 aa9.21□□□□□ -0.93
RAB11A-201ENST00000261890 HDAC9Q9UKV0 1011 aa9.21□□□□□ -0.93
RAB11A-201ENST00000261890 PTPRTO14522 1441 aa9.21□□□□□ -0.93
RAB11A-201ENST00000261890 FAM135BQ49AJ0 1406 aa9.21□□□□□ -0.93
RAB11A-201ENST00000261890 LETM1O95202 739 aaPredicted RBP9.21□□□□□ -0.93
RAB11A-201ENST00000261890 ATP5J2-PTCD1G3V325 749 aa9.21□□□□□ -0.94
RAB11A-201ENST00000261890 GRM8O00222 908 aa9.21□□□□□ -0.94
RAB11A-201ENST00000261890 CWC27Q6UX04 472 aaKnown RBP9.21□□□□□ -0.94
RAB11A-201ENST00000261890 NUTM1Q86Y26 1132 aa9.21□□□□□ -0.94
RAB11A-201ENST00000261890 KDM5CP41229 1560 aa9.21□□□□□ -0.94
RAB11A-201ENST00000261890 ZFYP08048 801 aaPredicted RBP9.21□□□□□ -0.94
RAB11A-201ENST00000261890 IL15P40933 162 aaPredicted RBP9.21□□□□□ -0.94
RAB11A-201ENST00000261890 PIP4K2AP48426 406 aaPredicted RBP9.21□□□□□ -0.94
RAB11A-201ENST00000261890 EYA3Q99504 573 aa9.2□□□□□ -0.94
RAB11A-201ENST00000261890 ANKRD2Q9GZV1 360 aa9.2□□□□□ -0.94
RAB11A-201ENST00000261890 ERVV-2B6SEH9 535 aa9.2□□□□□ -0.94
RAB11A-201ENST00000261890 FBLN1P23142 703 aa9.2□□□□□ -0.94
RAB11A-201ENST00000261890 SLC39A6Q13433 755 aa9.2□□□□□ -0.94
RAB11A-201ENST00000261890 OLFM4Q6UX06 510 aa9.2□□□□□ -0.94
RAB11A-201ENST00000261890 IQCA1Q86XH1 822 aa9.2□□□□□ -0.94
RAB11A-201ENST00000261890 ZNF444Q8N0Y2 327 aaPredicted RBP9.2□□□□□ -0.94
RAB11A-201ENST00000261890 FLAD1Q8NFF5 587 aa9.2□□□□□ -0.94
RAB11A-201ENST00000261890 DDX21Q9NR30 783 aaKnown RBP eCLIP9.2□□□□□ -0.94
RAB11A-201ENST00000261890 PDRG1Q9NUG6 133 aa9.2□□□□□ -0.94
RAB11A-201ENST00000261890 IL13P35225 146 aa9.2□□□□□ -0.94
RAB11A-201ENST00000261890 RSPH6AQ9H0K4 717 aa9.2□□□□□ -0.94
RAB11A-201ENST00000261890 BAG6P46379 1132 aa9.2□□□□□ -0.94
RAB11A-201ENST00000261890 CCDC178Q5BJE1 867 aa9.2□□□□□ -0.94
RAB11A-201ENST00000261890 CCNL1Q9UK58 526 aaPredicted RBP9.2□□□□□ -0.94
RAB11A-201ENST00000261890 ERCC6L2Q5T890 1561 aa9.19□□□□□ -0.94
RAB11A-201ENST00000261890 SHROOM2Q13796 1616 aa9.19□□□□□ -0.94
RAB11A-201ENST00000261890 MBD3O95983 291 aa9.19□□□□□ -0.94
RAB11A-201ENST00000261890 HLA-DOAP06340 250 aa9.19□□□□□ -0.94
RAB11A-201ENST00000261890 ZNF772Q68DY9 489 aaPredicted RBP9.19□□□□□ -0.94
RAB11A-201ENST00000261890 NUP133Q8WUM0 1156 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms