RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 MCM10Q7L590 875 aa15.24■□□□□ 0.03
PFDN1-201ENST00000261813 RRP7AQ9Y3A4 280 aaKnown RBP15.24■□□□□ 0.03
PFDN1-201ENST00000261813 TTLL13PA6NNM8 815 aa15.24■□□□□ 0.03
PFDN1-201ENST00000261813 HTATSF1O43719 755 aaKnown RBP15.24■□□□□ 0.03
PFDN1-201ENST00000261813 RIPK4P57078 832 aa15.24■□□□□ 0.03
PFDN1-201ENST00000261813 TXNRD1Q16881 649 aa15.24■□□□□ 0.03
PFDN1-201ENST00000261813 FAM9BQ8IZU0 186 aa15.24■□□□□ 0.03
PFDN1-201ENST00000261813 RTF1Q92541 710 aaKnown RBP15.24■□□□□ 0.03
PFDN1-201ENST00000261813 ASAP1Q9ULH1 1129 aa15.24■□□□□ 0.03
PFDN1-201ENST00000261813 PALLDQ8WX93 1383 aa15.23■□□□□ 0.03
PFDN1-201ENST00000261813 APAF1O14727 1248 aa15.23■□□□□ 0.03
PFDN1-201ENST00000261813 PELP1Q8IZL8 1130 aaKnown RBP15.23■□□□□ 0.03
PFDN1-201ENST00000261813 ATG3Q9NT62 314 aa15.23■□□□□ 0.03
PFDN1-201ENST00000261813 LY75O60449 1722 aa15.22■□□□□ 0.03
PFDN1-201ENST00000261813 SIPA1L3O60292 1781 aaPredicted RBP15.22■□□□□ 0.03
PFDN1-201ENST00000261813 ATN1P54259 1190 aaPredicted RBP15.22■□□□□ 0.03
PFDN1-201ENST00000261813 NEUROD2Q15784 382 aa15.22■□□□□ 0.03
PFDN1-201ENST00000261813 PPP1R1BQ9UD71 204 aaPredicted RBP15.22■□□□□ 0.03
PFDN1-201ENST00000261813 NUP188Q5SRE5 1749 aa15.22■□□□□ 0.03
PFDN1-201ENST00000261813 PAPPAQ13219 1627 aa15.21■□□□□ 0.03
PFDN1-201ENST00000261813 TEFQ10587 303 aa15.21■□□□□ 0.02
PFDN1-201ENST00000261813 SMARCC1Q92922 1105 aaPredicted RBP15.21■□□□□ 0.02
PFDN1-201ENST00000261813 THUMPD2Q9BTF0 503 aaKnown RBP15.21■□□□□ 0.02
PFDN1-201ENST00000261813 YY1P25490 414 aa15.2■□□□□ 0.02
PFDN1-201ENST00000261813 LRRC4BQ9NT99 713 aa15.2■□□□□ 0.02
PFDN1-201ENST00000261813 TRIM35Q9UPQ4 493 aa15.2■□□□□ 0.02
PFDN1-201ENST00000261813 SENP3-EIF4A1A0A087X0R7 540 aa15.19■□□□□ 0.02
PFDN1-201ENST00000261813 KCNQ4P56696 695 aa15.19■□□□□ 0.02
PFDN1-201ENST00000261813 SLC39A6Q13433 755 aa15.19■□□□□ 0.02
PFDN1-201ENST00000261813 RNF25Q96BH1 459 aaPredicted RBP15.19■□□□□ 0.02
PFDN1-201ENST00000261813 SPON1Q9HCB6 807 aa15.19■□□□□ 0.02
PFDN1-201ENST00000261813 LMOD3Q0VAK6 560 aa15.18■□□□□ 0.02
PFDN1-201ENST00000261813 SLC27A3Q5K4L6 730 aa15.18■□□□□ 0.02
PFDN1-201ENST00000261813 CCNL1Q9UK58 526 aaPredicted RBP15.18■□□□□ 0.02
PFDN1-201ENST00000261813 KCPQ6ZWJ8 1503 aa15.17■□□□□ 0.02
PFDN1-201ENST00000261813 LOC102724428A0A0B4J2F2 783 aa15.17■□□□□ 0.02
PFDN1-201ENST00000261813 SIK1P57059 783 aa15.17■□□□□ 0.02
PFDN1-201ENST00000261813 SLC4A9Q96Q91 983 aa15.17■□□□□ 0.02
PFDN1-201ENST00000261813 TMEM106CQ9BVX2 250 aa15.16■□□□□ 0.02
PFDN1-201ENST00000261813 ANO8Q9HCE9 1232 aaPredicted RBP15.16■□□□□ 0.02
PFDN1-201ENST00000261813 UBR2Q8IWV8 1755 aa15.15■□□□□ 0.02
PFDN1-201ENST00000261813 BTBD11A6QL63 1104 aa15.15■□□□□ 0.02
PFDN1-201ENST00000261813 KCNQ3O43525 872 aa15.15■□□□□ 0.02
PFDN1-201ENST00000261813 PTCD1O75127 700 aaKnown RBP15.15■□□□□ 0.02
PFDN1-201ENST00000261813 TAF7Q15545 349 aaPredicted RBP15.15■□□□□ 0.02
PFDN1-201ENST00000261813 ZNF790Q6PG37 636 aa15.15■□□□□ 0.02
PFDN1-201ENST00000261813 PDAP1Q13442 181 aaKnown RBP15.14■□□□□ 0.01
PFDN1-201ENST00000261813 ITPK1Q13572 414 aa15.14■□□□□ 0.01
PFDN1-201ENST00000261813 MIS18AQ9NYP9 233 aa15.14■□□□□ 0.01
PFDN1-201ENST00000261813 C5P01031 1676 aa15.14■□□□□ 0.01
PFDN1-201ENST00000261813 ZNF831Q5JPB2 1677 aa15.14■□□□□ 0.01
PFDN1-201ENST00000261813 ECM2O94769 699 aaPredicted RBP15.13■□□□□ 0.01
PFDN1-201ENST00000261813 ATP6V1AP38606 617 aa15.13■□□□□ 0.01
PFDN1-201ENST00000261813 ZNF827Q17R98 1081 aa15.13■□□□□ 0.01
PFDN1-201ENST00000261813 TAF1LQ8IZX4 1826 aa15.13■□□□□ 0.01
PFDN1-201ENST00000261813 KDM3BQ7LBC6 1761 aa15.13■□□□□ 0.01
PFDN1-201ENST00000261813 TJP1Q07157 1748 aa15.13■□□□□ 0.01
PFDN1-201ENST00000261813 CICQ96RK0 1608 aaPredicted RBP15.13■□□□□ 0.01
PFDN1-201ENST00000261813 RIOK3O14730 519 aaKnown RBP15.12■□□□□ 0.01
PFDN1-201ENST00000261813 CCDC27Q2M243 656 aa15.12■□□□□ 0.01
PFDN1-201ENST00000261813 TTC5Q8N0Z6 440 aa15.12■□□□□ 0.01
PFDN1-201ENST00000261813 LINC00116Q8NCU8 138 aa15.12■□□□□ 0.01
PFDN1-201ENST00000261813 ZNF496Q96IT1 587 aaPredicted RBP15.12■□□□□ 0.01
PFDN1-201ENST00000261813 PSEN1P49768 467 aa15.11■□□□□ 0.01
PFDN1-201ENST00000261813 NGEFQ8N5V2 710 aa15.11■□□□□ 0.01
PFDN1-201ENST00000261813 SLC39A7Q92504 469 aa15.11■□□□□ 0.01
PFDN1-201ENST00000261813 HEG1Q9ULI3 1381 aa15.11■□□□□ 0.01
PFDN1-201ENST00000261813 C4BP0C0L5 1744 aa15.11■□□□□ 0.01
PFDN1-201ENST00000261813 COL5A3P25940 1745 aaPredicted RBP15.11■□□□□ 0.01
PFDN1-201ENST00000261813 SLC15A2Q16348 729 aa15.11■□□□□ 0.01
PFDN1-201ENST00000261813 WWC1Q8IX03 1113 aa15.11■□□□□ 0.01
PFDN1-201ENST00000261813 YTHDC1Q96MU7 727 aaKnown RBP15.11■□□□□ 0.01
PFDN1-201ENST00000261813 SALL2Q9Y467 1007 aaPredicted RBP15.11■□□□□ 0.01
PFDN1-201ENST00000261813 C7P10643 843 aa15.1■□□□□ 0.01
PFDN1-201ENST00000261813 DNAJC10Q8IXB1 793 aa15.1■□□□□ 0.01
PFDN1-201ENST00000261813 VSIG10Q8N0Z9 540 aa15.1■□□□□ 0.01
PFDN1-201ENST00000261813 FMNL2Q96PY5 1086 aa15.1■□□□□ 0.01
PFDN1-201ENST00000261813 STK32BQ9NY57 414 aa15.1■□□□□ 0.01
PFDN1-201ENST00000261813 TSPYL4Q9UJ04 414 aa15.1■□□□□ 0.01
PFDN1-201ENST00000261813 CHL1O00533 1208 aa15.09■□□□□ 0.01
PFDN1-201ENST00000261813 BABAM1Q9NWV8 329 aa15.09■□□□□ 0.01
PFDN1-201ENST00000261813 LAS1LQ9Y4W2 734 aaKnown RBP15.09■□□□□ 0.01
PFDN1-201ENST00000261813 CENPBP07199 599 aaPredicted RBP15.08■□□□□ 0
PFDN1-201ENST00000261813 ZNF853P0CG23 659 aa15.08■□□□□ 0
PFDN1-201ENST00000261813 EIF4A1P60842 406 aaKnown RBP15.08■□□□□ 0
PFDN1-201ENST00000261813 HNRNPUQ00839 825 aaKnown RBP eCLIP15.08■□□□□ 0
PFDN1-201ENST00000261813 CFAP44Q96MT7 982 aa15.08■□□□□ 0
PFDN1-201ENST00000261813 TUBGCP6Q96RT7 1819 aa15.07■□□□□ 0
PFDN1-201ENST00000261813 PRAMEF22A3QJZ6 481 aa15.07■□□□□ 0
PFDN1-201ENST00000261813 CALD1Q05682 793 aaKnown RBP15.07■□□□□ 0
PFDN1-201ENST00000261813 IER5LQ5T953 404 aa15.07■□□□□ 0
PFDN1-201ENST00000261813 AMIGO3Q86WK7 504 aa15.07■□□□□ 0
PFDN1-201ENST00000261813 IFT57Q9NWB7 429 aa15.07■□□□□ 0
PFDN1-201ENST00000261813 CNTNAP4Q9C0A0 1308 aa15.06■□□□□ 0
PFDN1-201ENST00000261813 CYP19A1P11511 503 aaPredicted RBP15.06■□□□□ 0
PFDN1-201ENST00000261813 HMGB2P26583 209 aaKnown RBP15.06■□□□□ 0
PFDN1-201ENST00000261813 METRNQ9UJH8 293 aa15.06■□□□□ 0
PFDN1-201ENST00000261813 ZNF521Q96K83 1311 aa15.05■□□□□ 0
PFDN1-201ENST00000261813 CRKLP46109 303 aaKnown RBP15.05■□□□□ -0
PFDN1-201ENST00000261813 GNAI1P63096 354 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms