RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 MICALCLQ6ZW33 695 aa12.59□□□□□ -0.39
CSNK1A1-201ENST00000261798 LARP6Q9BRS8 491 aaKnown RBP12.59□□□□□ -0.39
CSNK1A1-201ENST00000261798 RTEL1-TNFRSF6BF6WH68 1400 aa12.59□□□□□ -0.39
CSNK1A1-201ENST00000261798 SNAPC4Q5SXM2 1469 aa12.59□□□□□ -0.39
CSNK1A1-201ENST00000261798 GNG11P61952 73 aa12.59□□□□□ -0.39
CSNK1A1-201ENST00000261798 ABTB2Q8N961 1025 aa12.59□□□□□ -0.39
CSNK1A1-201ENST00000261798 CNPY2Q9Y2B0 182 aa12.59□□□□□ -0.39
CSNK1A1-201ENST00000261798 KDM2BQ8NHM5 1336 aa12.59□□□□□ -0.39
CSNK1A1-201ENST00000261798 CCDC43Q96MW1 224 aaKnown RBP12.59□□□□□ -0.39
CSNK1A1-201ENST00000261798 NSD2O96028 1365 aa12.59□□□□□ -0.39
CSNK1A1-201ENST00000261798 ZRSR2Q15696 482 aaKnown RBP12.58□□□□□ -0.39
CSNK1A1-201ENST00000261798 MCM10Q7L590 875 aa12.58□□□□□ -0.39
CSNK1A1-201ENST00000261798 SPG7Q9UQ90 795 aa12.58□□□□□ -0.39
CSNK1A1-201ENST00000261798 IVLP07476 585 aa12.58□□□□□ -0.4
CSNK1A1-201ENST00000261798 SRRTQ9BXP5 876 aaKnown RBP12.58□□□□□ -0.4
CSNK1A1-201ENST00000261798 SCAF11Q99590 1463 aaKnown RBP12.58□□□□□ -0.4
CSNK1A1-201ENST00000261798 F6X3S4 739 aa12.58□□□□□ -0.4
CSNK1A1-201ENST00000261798 ANO6Q4KMQ2 910 aa12.58□□□□□ -0.4
CSNK1A1-201ENST00000261798 ZFYVE27Q5T4F4 411 aa12.58□□□□□ -0.4
CSNK1A1-201ENST00000261798 ZNF530Q6P9A1 599 aaPredicted RBP12.58□□□□□ -0.4
CSNK1A1-201ENST00000261798 TAF4BQ92750 862 aa12.58□□□□□ -0.4
CSNK1A1-201ENST00000261798 TANGO6Q9C0B7 1094 aa12.58□□□□□ -0.4
CSNK1A1-201ENST00000261798 RALGAPBQ86X10 1494 aa12.58□□□□□ -0.4
CSNK1A1-201ENST00000261798 FKBP4Q02790 459 aaKnown RBP eCLIP12.58□□□□□ -0.4
CSNK1A1-201ENST00000261798 ZSCAN16Q9H4T2 348 aaPredicted RBP12.58□□□□□ -0.4
CSNK1A1-201ENST00000261798 CEP126Q9P2H0 1117 aa12.58□□□□□ -0.4
CSNK1A1-201ENST00000261798 DNMBPQ6XZF7 1577 aa12.57□□□□□ -0.4
CSNK1A1-201ENST00000261798 SPA17Q15506 151 aa12.57□□□□□ -0.4
CSNK1A1-201ENST00000261798 TAX1BP1Q86VP1 789 aa12.57□□□□□ -0.4
CSNK1A1-201ENST00000261798 BOLA2Q9H3K6 86 aa12.57□□□□□ -0.4
CSNK1A1-201ENST00000261798 INCENPQ9NQS7 918 aa12.57□□□□□ -0.4
CSNK1A1-201ENST00000261798 CAMSAP2Q08AD1 1489 aa12.57□□□□□ -0.4
CSNK1A1-201ENST00000261798 NUP133Q8WUM0 1156 aa12.57□□□□□ -0.4
CSNK1A1-201ENST00000261798 RBSNQ9H1K0 784 aa12.57□□□□□ -0.4
CSNK1A1-201ENST00000261798 ECHDC1Q9NTX5 307 aa12.57□□□□□ -0.4
CSNK1A1-201ENST00000261798 RLBP1P12271 317 aa12.57□□□□□ -0.4
CSNK1A1-201ENST00000261798 INTS4Q96HW7 963 aaKnown RBP12.57□□□□□ -0.4
CSNK1A1-201ENST00000261798 ZNF445P59923 1031 aa12.56□□□□□ -0.4
CSNK1A1-201ENST00000261798 GUCY1B3Q02153 619 aa12.56□□□□□ -0.4
CSNK1A1-201ENST00000261798 KLHL10Q6JEL2 608 aa12.56□□□□□ -0.4
CSNK1A1-201ENST00000261798 EVI5LQ96CN4 794 aa12.56□□□□□ -0.4
CSNK1A1-201ENST00000261798 MIS18AQ9NYP9 233 aa12.56□□□□□ -0.4
CSNK1A1-201ENST00000261798 BIN1O00499 593 aa12.56□□□□□ -0.4
CSNK1A1-201ENST00000261798 TXNDC2Q86VQ3 553 aa12.56□□□□□ -0.4
CSNK1A1-201ENST00000261798 F13A1P00488 732 aa12.56□□□□□ -0.4
CSNK1A1-201ENST00000261798 GPATCH11Q8N954 259 aa12.56□□□□□ -0.4
CSNK1A1-201ENST00000261798 CNNM3Q8NE01 707 aa12.56□□□□□ -0.4
CSNK1A1-201ENST00000261798 ESYT1Q9BSJ8 1104 aa12.56□□□□□ -0.4
CSNK1A1-201ENST00000261798 DACT1Q9NYF0 836 aa12.56□□□□□ -0.4
CSNK1A1-201ENST00000261798 RAI14Q9P0K7 980 aa12.56□□□□□ -0.4
CSNK1A1-201ENST00000261798 DNAI1Q9UI46 699 aa12.56□□□□□ -0.4
CSNK1A1-201ENST00000261798 PAFAH1B1P43034 410 aa12.56□□□□□ -0.4
CSNK1A1-201ENST00000261798 PDE1AP54750 535 aa12.56□□□□□ -0.4
CSNK1A1-201ENST00000261798 MTMR7Q9Y216 660 aa12.56□□□□□ -0.4
CSNK1A1-201ENST00000261798 GNAT3A8MTJ3 354 aa12.55□□□□□ -0.4
CSNK1A1-201ENST00000261798 ANKRD44Q8N8A2 993 aa12.55□□□□□ -0.4
CSNK1A1-201ENST00000261798 CCDC12Q8WUD4 166 aaPredicted RBP12.55□□□□□ -0.4
CSNK1A1-201ENST00000261798 PRM3Q9NNZ6 103 aa12.55□□□□□ -0.4
CSNK1A1-201ENST00000261798 CNNM1Q9NRU3 951 aa12.55□□□□□ -0.4
CSNK1A1-201ENST00000261798 IGSF3O75054 1194 aa12.55□□□□□ -0.4
CSNK1A1-201ENST00000261798 KRT18P05783 430 aaKnown RBP12.55□□□□□ -0.4
CSNK1A1-201ENST00000261798 SYCP1Q15431 976 aa12.55□□□□□ -0.4
CSNK1A1-201ENST00000261798 CCDC57Q2TAC2 916 aa12.55□□□□□ -0.4
CSNK1A1-201ENST00000261798 GTF2A1P52655 376 aaPredicted RBP12.55□□□□□ -0.4
CSNK1A1-201ENST00000261798 CTR9Q6PD62 1173 aa12.55□□□□□ -0.4
CSNK1A1-201ENST00000261798 MYRIPQ8NFW9 859 aa12.55□□□□□ -0.4
CSNK1A1-201ENST00000261798 UBAC1Q9BSL1 405 aa12.55□□□□□ -0.4
CSNK1A1-201ENST00000261798 CCDC61Q9Y6R9 512 aa12.55□□□□□ -0.4
CSNK1A1-201ENST00000261798 NEFHP12036 1026 aa12.55□□□□□ -0.4
CSNK1A1-201ENST00000261798 MNAT1P51948 309 aa12.55□□□□□ -0.4
CSNK1A1-201ENST00000261798 DNAAF4Q8WXU2 420 aa12.55□□□□□ -0.4
CSNK1A1-201ENST00000261798 RBM33Q96EV2 1170 aaKnown RBP12.55□□□□□ -0.4
CSNK1A1-201ENST00000261798 LAMC3Q9Y6N6 1575 aa12.55□□□□□ -0.4
CSNK1A1-201ENST00000261798 YEATS4O95619 227 aa12.54□□□□□ -0.4
CSNK1A1-201ENST00000261798 TYRO3Q06418 890 aa12.54□□□□□ -0.4
CSNK1A1-201ENST00000261798 ZGPATQ8N5A5 531 aaKnown RBP12.54□□□□□ -0.4
CSNK1A1-201ENST00000261798 IPO4Q8TEX9 1081 aaKnown RBP12.54□□□□□ -0.4
CSNK1A1-201ENST00000261798 HMG20BQ9P0W2 317 aa12.54□□□□□ -0.4
CSNK1A1-201ENST00000261798 POGZQ7Z3K3 1410 aa12.54□□□□□ -0.4
CSNK1A1-201ENST00000261798 ENOX2Q16206 610 aaKnown RBP12.54□□□□□ -0.4
CSNK1A1-201ENST00000261798 PTGS1P23219 599 aa12.54□□□□□ -0.4
CSNK1A1-201ENST00000261798 FLIIQ13045 1269 aa12.54□□□□□ -0.4
CSNK1A1-201ENST00000261798 CPLX3Q8WVH0 158 aa12.54□□□□□ -0.4
CSNK1A1-201ENST00000261798 MBIPQ9NS73 344 aa12.54□□□□□ -0.4
CSNK1A1-201ENST00000261798 PTPRKQ15262 1439 aa12.54□□□□□ -0.4
CSNK1A1-201ENST00000261798 RNF187Q5TA31 235 aaPredicted RBP12.54□□□□□ -0.4
CSNK1A1-201ENST00000261798 PIBF1Q8WXW3 757 aa12.54□□□□□ -0.4
CSNK1A1-201ENST00000261798 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.54□□□□□ -0.4
CSNK1A1-201ENST00000261798 V9GYY5 206 aaPredicted RBP12.54□□□□□ -0.4
CSNK1A1-201ENST00000261798 NPHP3Q7Z494 1330 aa12.54□□□□□ -0.4
CSNK1A1-201ENST00000261798 ZSWIM4Q9H7M6 989 aa12.53□□□□□ -0.4
CSNK1A1-201ENST00000261798 ZBTB40Q9NUA8 1239 aa12.53□□□□□ -0.4
CSNK1A1-201ENST00000261798 USO1O60763 962 aaKnown RBP12.53□□□□□ -0.4
CSNK1A1-201ENST00000261798 DNM1Q05193 864 aaKnown RBP12.53□□□□□ -0.4
CSNK1A1-201ENST00000261798 DNAJC25Q9H1X3 360 aa12.53□□□□□ -0.4
CSNK1A1-201ENST00000261798 TSHZ3Q63HK5 1081 aa12.53□□□□□ -0.4
CSNK1A1-201ENST00000261798 NUP88Q99567 741 aaPredicted RBP12.53□□□□□ -0.4
CSNK1A1-201ENST00000261798 TMX1Q9H3N1 280 aa12.53□□□□□ -0.4
CSNK1A1-201ENST00000261798 TAF7Q15545 349 aaPredicted RBP12.53□□□□□ -0.4
CSNK1A1-201ENST00000261798 BTBD11A6QL63 1104 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms