RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 HOXC9P31274 260 aa23.43■■□□□ 1.34
SCARB1-201ENST00000261693 CEBPAP49715 358 aaPredicted RBP23.43■■□□□ 1.34
SCARB1-201ENST00000261693 CACNA1FO60840 1977 aa23.42■■□□□ 1.34
SCARB1-201ENST00000261693 HSPA4P34932 840 aa23.42■■□□□ 1.34
SCARB1-201ENST00000261693 GLIPR1L2Q4G1C9 344 aa23.42■■□□□ 1.34
SCARB1-201ENST00000261693 USP48Q86UV5 1035 aa23.42■■□□□ 1.34
SCARB1-201ENST00000261693 SSH3Q8TE77 659 aa23.42■■□□□ 1.34
SCARB1-201ENST00000261693 TSPY26PQ9H489 355 aa23.42■■□□□ 1.34
SCARB1-201ENST00000261693 ZKSCAN5Q9Y2L8 839 aa23.42■■□□□ 1.34
SCARB1-201ENST00000261693 MAP3K5Q99683 1374 aa23.42■■□□□ 1.34
SCARB1-201ENST00000261693 ZNF500O60304 480 aaPredicted RBP23.41■■□□□ 1.34
SCARB1-201ENST00000261693 SRGAP3O43295 1099 aa23.4■■□□□ 1.34
SCARB1-201ENST00000261693 RHPN1Q8TCX5 695 aa23.4■■□□□ 1.34
SCARB1-201ENST00000261693 PIK3C2AO00443 1686 aa23.4■■□□□ 1.34
SCARB1-201ENST00000261693 LRRC37A3O60309 1634 aa23.4■■□□□ 1.34
SCARB1-201ENST00000261693 NBPF7P0C2Y1 421 aaPredicted RBP23.39■■□□□ 1.34
SCARB1-201ENST00000261693 PI4K2BQ8TCG2 481 aa23.39■■□□□ 1.34
SCARB1-201ENST00000261693 WDR33Q9C0J8 1336 aaKnown RBP23.39■■□□□ 1.33
SCARB1-201ENST00000261693 DTNBO60941 627 aa23.39■■□□□ 1.33
SCARB1-201ENST00000261693 RBM10P98175 930 aaKnown RBP23.39■■□□□ 1.33
SCARB1-201ENST00000261693 AOX1Q06278 1338 aa23.38■■□□□ 1.33
SCARB1-201ENST00000261693 SYAP1Q96A49 352 aaPredicted RBP23.38■■□□□ 1.33
SCARB1-201ENST00000261693 CCDC39Q9UFE4 941 aa23.38■■□□□ 1.33
SCARB1-201ENST00000261693 MPNDQ8N594 471 aa23.37■■□□□ 1.33
SCARB1-201ENST00000261693 SNX14Q9Y5W7 946 aa23.37■■□□□ 1.33
SCARB1-201ENST00000261693 EID1Q9Y6B2 187 aa23.37■■□□□ 1.33
SCARB1-201ENST00000261693 CWC27Q6UX04 472 aaKnown RBP23.37■■□□□ 1.33
SCARB1-201ENST00000261693 C14orf37Q86TY3 774 aa23.37■■□□□ 1.33
SCARB1-201ENST00000261693 RASEFQ8IZ41 740 aa23.37■■□□□ 1.33
SCARB1-201ENST00000261693 IL17RAQ96F46 866 aa23.37■■□□□ 1.33
SCARB1-201ENST00000261693 SPG7Q9UQ90 795 aa23.37■■□□□ 1.33
SCARB1-201ENST00000261693 SETD1BQ9UPS6 1966 aaKnown RBP23.37■■□□□ 1.33
SCARB1-201ENST00000261693 SGSM2O43147 1006 aa23.36■■□□□ 1.33
SCARB1-201ENST00000261693 PTMAP06454 111 aaKnown RBP23.36■■□□□ 1.33
SCARB1-201ENST00000261693 CPA1P15085 419 aa23.36■■□□□ 1.33
SCARB1-201ENST00000261693 VSIG10Q8N0Z9 540 aa23.36■■□□□ 1.33
SCARB1-201ENST00000261693 RAD50Q92878 1312 aa23.36■■□□□ 1.33
SCARB1-201ENST00000261693 RAB11FIP3O75154 756 aa23.36■■□□□ 1.33
SCARB1-201ENST00000261693 CNPY2Q9Y2B0 182 aa23.36■■□□□ 1.33
SCARB1-201ENST00000261693 RPAP1Q9BWH6 1393 aaPredicted RBP23.36■■□□□ 1.33
SCARB1-201ENST00000261693 ANXA1P04083 346 aa23.35■■□□□ 1.33
SCARB1-201ENST00000261693 POLA2Q14181 598 aa23.35■■□□□ 1.33
SCARB1-201ENST00000261693 ABTB2Q8N961 1025 aa23.35■■□□□ 1.33
SCARB1-201ENST00000261693 ZBTB7CA1YPR0 619 aa23.35■■□□□ 1.33
SCARB1-201ENST00000261693 AK2P54819 239 aa23.35■■□□□ 1.33
SCARB1-201ENST00000261693 CHPF2Q9P2E5 772 aa23.34■■□□□ 1.33
SCARB1-201ENST00000261693 DIP2AQ14689 1571 aa23.34■■□□□ 1.33
SCARB1-201ENST00000261693 PXDNLA1KZ92 1463 aa23.34■■□□□ 1.33
SCARB1-201ENST00000261693 LSG1Q9H089 658 aaKnown RBP23.34■■□□□ 1.33
SCARB1-201ENST00000261693 NWD1Q149M9 1564 aa23.34■■□□□ 1.33
SCARB1-201ENST00000261693 PI4KAP2A4QPH2 592 aa23.33■■□□□ 1.33
SCARB1-201ENST00000261693 PI4KAP1Q8N8J0 262 aa23.33■■□□□ 1.33
SCARB1-201ENST00000261693 KIF1BPQ96EK5 621 aa23.33■■□□□ 1.33
SCARB1-201ENST00000261693 CNTROBQ8N137 903 aa23.33■■□□□ 1.33
SCARB1-201ENST00000261693 RUFY3Q7L099 469 aa23.32■■□□□ 1.32
SCARB1-201ENST00000261693 LGR6Q9HBX8 967 aa23.32■■□□□ 1.32
SCARB1-201ENST00000261693 N4BP2Q86UW6 1770 aaPredicted RBP23.32■■□□□ 1.32
SCARB1-201ENST00000261693 PHF14O94880 888 aa23.32■■□□□ 1.32
SCARB1-201ENST00000261693 TTC14Q96N46 770 aa23.32■■□□□ 1.32
SCARB1-201ENST00000261693 KCNQ3O43525 872 aa23.31■■□□□ 1.32
SCARB1-201ENST00000261693 PLEKHG5O94827 1062 aa23.31■■□□□ 1.32
SCARB1-201ENST00000261693 OS9Q13438 667 aaPredicted RBP23.31■■□□□ 1.32
SCARB1-201ENST00000261693 MCM5P33992 734 aa23.31■■□□□ 1.32
SCARB1-201ENST00000261693 FAM13BQ9NYF5 915 aa23.31■■□□□ 1.32
SCARB1-201ENST00000261693 UQCRHLA0A096LP55 91 aa23.3■■□□□ 1.32
SCARB1-201ENST00000261693 UQCRHP07919 91 aa23.3■■□□□ 1.32
SCARB1-201ENST00000261693 ZSCAN22P10073 491 aaPredicted RBP23.3■■□□□ 1.32
SCARB1-201ENST00000261693 CASTP20810 708 aaKnown RBP23.3■■□□□ 1.32
SCARB1-201ENST00000261693 SYT1P21579 422 aa23.3■■□□□ 1.32
SCARB1-201ENST00000261693 PDCL3Q9H2J4 239 aa23.3■■□□□ 1.32
SCARB1-201ENST00000261693 LIMCH1Q9UPQ0 1083 aa23.3■■□□□ 1.32
SCARB1-201ENST00000261693 TERF1P54274 439 aa23.29■■□□□ 1.32
SCARB1-201ENST00000261693 BEND3Q5T5X7 828 aa23.29■■□□□ 1.32
SCARB1-201ENST00000261693 DNAAF4Q8WXU2 420 aa23.29■■□□□ 1.32
SCARB1-201ENST00000261693 BABAM1Q9NWV8 329 aa23.29■■□□□ 1.32
SCARB1-201ENST00000261693 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.29■■□□□ 1.322e-6■■□□□ 13.2
SCARB1-201ENST00000261693 STX6O43752 255 aa23.29■■□□□ 1.32
SCARB1-201ENST00000261693 LARGE1O95461 756 aa23.29■■□□□ 1.32
SCARB1-201ENST00000261693 FIBPO43427 364 aa23.29■■□□□ 1.32
SCARB1-201ENST00000261693 EPB41L2O43491 1005 aaKnown RBP23.29■■□□□ 1.32
SCARB1-201ENST00000261693 EIF4A1P60842 406 aaKnown RBP23.29■■□□□ 1.32
SCARB1-201ENST00000261693 USP25Q9UHP3 1055 aa23.29■■□□□ 1.32
SCARB1-201ENST00000261693 CSPP1Q1MSJ5 1256 aa23.28■■□□□ 1.32
SCARB1-201ENST00000261693 ZNF830Q96NB3 372 aaPredicted RBP23.28■■□□□ 1.32
SCARB1-201ENST00000261693 SMC3Q9UQE7 1217 aa23.28■■□□□ 1.32
SCARB1-201ENST00000261693 DDX54Q8TDD1 881 aaKnown RBP23.28■■□□□ 1.32
SCARB1-201ENST00000261693 CCDC183Q5T5S1 534 aa23.27■■□□□ 1.32
SCARB1-201ENST00000261693 TBX22Q9Y458 520 aa23.27■■□□□ 1.32
SCARB1-201ENST00000261693 DIAPH3Q9NSV4 1193 aa23.27■■□□□ 1.32
SCARB1-201ENST00000261693 HCLS1P14317 486 aaPredicted RBP23.26■■□□□ 1.31
SCARB1-201ENST00000261693 PTH1RQ03431 593 aa23.26■■□□□ 1.31
SCARB1-201ENST00000261693 CCDC83Q8IWF9 413 aa23.26■■□□□ 1.31
SCARB1-201ENST00000261693 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.26■■□□□ 1.31
SCARB1-201ENST00000261693 MARF1Q9Y4F3 1742 aaKnown RBP23.26■■□□□ 1.31
SCARB1-201ENST00000261693 ADCK5Q3MIX3 580 aa23.26■■□□□ 1.31
SCARB1-201ENST00000261693 TMEM87AQ8NBN3 555 aa23.26■■□□□ 1.31
SCARB1-201ENST00000261693 F13A1P00488 732 aa23.25■■□□□ 1.31
SCARB1-201ENST00000261693 NBPF6Q5VWK0 638 aa23.25■■□□□ 1.31
SCARB1-201ENST00000261693 PRPF40BQ6NWY9 871 aaKnown RBP23.25■■□□□ 1.31
SCARB1-201ENST00000261693 NBPF4Q96M43 638 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms